| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 225755 | 114 (0.820) | 28 (0.210) | 10/170 | NT | 19.9% | intergenic (+180/‑4) | alaV/rrlH | tRNA‑Ala/23S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 2729217 = | 117 (0.880) | intergenic (‑33/+152) | rrlG/gltW | 23S ribosomal RNA of rrnG operon/tRNA‑Glu | |||||
Only 100 of 161 total aligned reads displayed.
TCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAA > NC_000913/2729141‑2729316 | gaacaacgaaagctgttcgtgagtctctcaaattttcgcaacacgatgatgaatcgaaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGaac > 1:2572954‑M2/77‑100 (MQ=255) ccAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCa < 2:2891648/100‑1 (MQ=11) ccAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCAAAAATTTGAGAGACTCACGAACAACTTTCa > 1:1522864/1‑100 (MQ=11) aagttgttcgtgagtctctcaaattttcgcaacacgatgatggatcgcaagaaacatcttcgggttgTGAAAATTTGAGAGACTCACGAACAAATTTCAt > 2:631210‑M2/68‑100 (MQ=255) aGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCaga > 1:188009/1‑98 (MQ=11) aGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCAtt > 2:2061826/1‑100 (MQ=32) ggCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCAt < 2:1903240/97‑1 (MQ=31) ggCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTg < 2:1845518/99‑1 (MQ=32) cacccACCGTGTACGCTTAGCCGCTTGACCACCCAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAAGTGGCGGGACCCACGAACAACTTTCAt < 2:1117493/92‑1 (MQ=11) cATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTc < 2:2253182/100‑1 (MQ=33) tCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAg > 1:1457521/1‑100 (MQ=33) tCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAg < 1:2453710/100‑1 (MQ=33) tCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAg > 1:2293215/1‑100 (MQ=32) tCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAg > 2:1852348/1‑100 (MQ=33) tCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAg > 2:2612666/1‑100 (MQ=33) ccACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAAAGACTCACGAACAACTTTCATTGTTCAgt > 1:620054/1‑100 (MQ=18) cACCGTGTACGCTTAGTCGTTTATCCTCATAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAgt < 1:650489/99‑1 (MQ=255) cACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAgt < 1:1800660/99‑1 (MQ=33) aCCGTGTACGCTTAGTCGCTTAACCTCACAGCCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCACTGTTCAgtgt > 2:2575473/1‑100 (MQ=12) aCCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAgtgt > 1:3121663/1‑100 (MQ=33) aCCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACACACGAACAACTTTCATTGTTCa > 2:3327828/1‑96 (MQ=17) ccGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGtt < 2:1611966/100‑1 (MQ=33) gtctctcaaattttcgcaacacgatgatgaatcgaaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTc > 2:852490‑M2/55‑100 (MQ=255) tctcaaattttcgcaacacgatgatggatcgcaagaaacatcttcgggttgTGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAAt > 1:3028577‑M2/52‑100 (MQ=255) tctcaaattttcgcaacacgatgatgaatcgaaagaaacatcttcgggttgCGAAAATTTGAGAAACTCACGAACAACTTTAGTTGTACAGTGTTTCAAt > 1:460873‑M2/52‑100 (MQ=255) cGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTAAAAAACTCACGAACAAATTTAATTATTCAGTGTTTCaa > 1:111454/1‑97 (MQ=11) gCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAAtttt > 1:3605633/1‑100 (MQ=33) cTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTc > 1:3394933/1‑100 (MQ=32) ttAGTCGCTTAACCTCACAATCCGAATTTGTTTCACTTCAGATTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTc < 1:650638/99‑1 (MQ=11) aattttcgcaacacgatgatggatcgcaagaaacatcttcgggttgTGAAAATTTGAGAGACTCACAAACAACTTTCATTGTTCAGTGTTTCAATTTTCa > 1:1812742‑M2/47‑100 (MQ=255) aattttcgcaacacgatgatgaatcgtaagaaacatcttcgggttgTGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCa > 1:1329537‑M2/47‑100 (MQ=255) aattttcgcaacacgatgatgaatcgaaagaaacatcttcgggttgTGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCa > 1:828541‑M2/47‑100 (MQ=255) aattttcgcaacacgatgatgaatcgaaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCa > 2:2048013‑M2/47‑100 (MQ=255) tcgTCGCTTAACCTCACAACCAGAACACCTTTCACTTCAGAGTCGCAAACCCTTGAGAACCTCACGCACCACATCCATTCTTCAGTGTTTCAAt > 2:3845442/3‑94 (MQ=2) tAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCa > 2:393816/1‑99 (MQ=32) attttcgcaacacgatgatgaatcgaaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCa > 2:3598893‑M2/46‑99 (MQ=255) aGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGc > 2:2388473/1‑100 (MQ=32) gTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCt < 1:3248408/100‑1 (MQ=32) gTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCt > 1:3006852/1‑100 (MQ=33) gTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCt < 1:2705458/100‑1 (MQ=33) gTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCt > 2:1136126/1‑100 (MQ=33) ttcgcaacacgatgatgaatcgtaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCtt > 1:486725‑M2/43‑100 (MQ=255) tCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCtt > 2:714074/1‑100 (MQ=33) tcgcaacacgatgatggatcgcaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGAACAACTTTCATTGATCAGTGTTTCAATTTTCAGCTTg > 1:1978613‑M2/42‑100 (MQ=255) cGCTTAACTTCACAACCCGAAGATGATTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCtt > 2:1907054/1‑99 (MQ=12) gCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGa < 1:778121/100‑1 (MQ=33) cgcaacacgatgatggatcgcaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGa > 2:3314810‑M2/41‑100 (MQ=255) cgcaacacgatgatgaatcgtaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGAACAACTTTCGTAGTTCAGTGTTTCAATTTTCAGCTTGa > 1:567299‑M2/41‑100 (MQ=255) gcaacacgatgatggatcgcaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTAAGTGTTTCAATTTTCAGCTTGAt > 1:204122‑M2/40‑100 (MQ=255) cTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGTCTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGAt < 1:1199329/100‑1 (MQ=17) cTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGAt < 2:2207116/100‑1 (MQ=33) cTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGAt > 2:41657/1‑100 (MQ=33) cTTAACCTCACAACCCGAAAATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGAt < 2:841476/100‑1 (MQ=18) tAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATcc > 2:2448141/1‑100 (MQ=33) aaCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATcc < 2:3095504/99‑1 (MQ=32) aCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAg < 1:1066274/100‑1 (MQ=33) aCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAg < 2:1747883/100‑1 (MQ=33) ccTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGa > 2:1148938/1‑100 (MQ=32) ccTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGa > 2:2906810/1‑100 (MQ=33) acgatgatggatcgcaagaaacatcatcgtgttgCGAAAATTTGAGAGACTCACGAACAACTTTCATTGATCAGTATTTCAATTTTCAGATTGATCCAGa > 1:630138‑M2/35‑100 (MQ=255) cTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAt > 2:2309956/1‑100 (MQ=32) cTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTATCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAt > 2:562268/1‑100 (MQ=17) tCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTGAGCTTGATCCAGAtt > 1:3863341/1‑100 (MQ=17) tCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAtt > 2:1025699/1‑100 (MQ=33) gatgatgaatcgaaagaaacatcttcgggttgCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAtt < 1:852500‑M2/68‑1 (MQ=255) acaACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGTGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAtttt < 2:1519081/100‑1 (MQ=18) acaACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAtttt < 2:3032823/100‑1 (MQ=33) acaACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAttt > 2:1742704/1‑99 (MQ=32) caACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGAttttt < 1:1852363/100‑1 (MQ=33) aCCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaa > 1:2073242/1‑100 (MQ=32) aCCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaa > 2:132198/1‑100 (MQ=33) cccGAAGATGTTTTAATTCAGAGTTGCGAAAATTTGAGAGACAAACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa > 2:1683612/1‑100 (MQ=11) cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa > 2:2663407/1‑100 (MQ=33) cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa < 1:26619/100‑1 (MQ=33) cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa > 1:3418381/1‑100 (MQ=33) cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaaa > 2:1971184/1‑100 (MQ=33) cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTaa < 1:1046949/99‑1 (MQ=33) ccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAag < 1:2061845/100‑1 (MQ=33) ccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAag < 2:1006296/100‑1 (MQ=33) gAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTTACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAag < 2:3062568/98‑1 (MQ=18) gAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAagag < 2:1735720/100‑1 (MQ=33) aaGATGTTTCACTTCAGAGTTGCGAAAATTTTAGTGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAagag < 1:1607784/99‑1 (MQ=16) aaGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGc < 2:2022307/100‑1 (MQ=33) aagaaacatcttcgggttgTGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCaaa < 2:1812727‑M2/81‑1 (MQ=255) aTGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCaaa < 1:3564691/100‑1 (MQ=33) gTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAata > 1:373964/1‑100 (MQ=35) gTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCAAGATTTTTAAAGAGCAAata > 1:2606782/1‑100 (MQ=25) aCTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCa < 2:831156/100‑1 (MQ=40) cTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCaa > 2:1241370/1‑100 (MQ=255) tCAGAGTTGCGAAAATTTGGGAGACTCACGAAGAACTTTCATGGTTCAGTGTGTCAATTTGCAGCTTGATGCAGAGTTTTAGAGAGCAAATATATCAAAc < 2:142261/100‑1 (MQ=14) tCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAAc < 1:3198666/100‑1 (MQ=255) tCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAACAAATATATCAAAc > 1:2472191/1‑100 (MQ=255) tCAGAGCTGCGAAAATTTGAGAGTCTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCaa < 2:213859/98‑1 (MQ=255) agagTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACaa < 1:1482729/100‑1 (MQ=255) ttgCGAAAATTTGAGAGACTCACGAACAACTTTTATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACt < 1:3762947‑M2/97‑1 (MQ=255) tgCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACtt < 1:1740280‑M2/98‑1 (MQ=255) gCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTa > 2:1776679‑M2/2‑100 (MQ=255) cGAAAATTTGAGATACTCACGAACACCTTTCATCATTCAGTTTTTCAAGTTTCAACATGATCCAGATTTTTAAAGGGCAAATAGATCAAACaacgctt > 2:3527250/1‑93 (MQ=11) cGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTaa > 1:2106174/1‑100 (MQ=255) cGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTaa > 2:205316/1‑100 (MQ=255) | TCTGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATATCAAACAAGACTTAA > NC_000913/2729141‑2729316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |