New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 349605 =NA (NA)12 (0.090) 6/164 NT NA noncoding (1/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
?NC_000913 349637 = NA (NA)noncoding (33/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 229 total aligned reads displayed.

TCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGG  >  NC_000913/349538‑349736
                                                                                                   |                                                                                                   
tCGACACCCTGTTGGGCCGTAAACAGGTGATATAATAAGCGCCCGTTCATTGTATTCGACAGCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGcc                                                                                                     <  2:1037503/100‑1 (MQ=18)
 caggcatcggttgtctgatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCTGATGCGTCGCTGACGCGACTTATCAGGcc                                                                                                     >  2:3643017‑M1/67‑99 (MQ=255)
 cGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCt                                                                                                    >  2:3423588/1‑100 (MQ=255)
 cGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCAATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCt                                                                                                    >  1:1885206/1‑100 (MQ=255)
  gACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAATCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTa                                                                                                   <  1:2371265/100‑1 (MQ=255)
   ggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTAc                                                                                                  >  2:1014185‑M1/65‑100 (MQ=255)
    cAACCTGTTTGCCCGTAGCAAGGTGAAATAAAAAACGCCCGTTGATTGTATTCTACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACg                                                                                                 <  2:1382582/100‑1 (MQ=255)
     catcggttgtcggatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtagGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTAcgg                                                                                                >  1:3539318‑M1/63‑99 (MQ=255)
       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAATGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGTGTCGCTGACGCGACTTATCAGGCCTACGAgg                                                                                              <  2:2748365/100‑1 (MQ=255)
       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAgg                                                                                              <  1:1716929/100‑1 (MQ=255)
          gTTTGCCCTTAGCCATGTGAAATAAAAAACCCCCGTTGATTGTATTTGATAGCCGATGCCTGATGCGTCGCTGACGCGTCTTATCAGGCCTACGAGGTGc                                                                                           <  2:698590/100‑1 (MQ=25)
          gTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGc                                                                                           >  2:170201/1‑100 (MQ=255)
           tttGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCa                                                                                          <  1:1377078/100‑1 (MQ=255)
           ttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtagGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCa                                                                                          >  1:1571559‑M1/57‑100 (MQ=255)
           ttggCCCGTAGCGAGGGGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGTGTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCa                                                                                          <  2:2974916/97‑1 (MQ=37)
             tGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACt                                                                                        <  1:3085193/100‑1 (MQ=255)
              gCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTg                                                                                       >  2:3446228/1‑100 (MQ=255)
               cccGTAGTCAGGTGAAATAAAAAACGCCCGTTGATTGTATTTGACAGCTGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTg                                                                                       <  1:284085/99‑1 (MQ=255)
               cccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                      >  2:1150158/1‑100 (MQ=255)
                ccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGaa                                                                                     >  1:1789617/1‑100 (MQ=255)
                ccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGaa                                                                                     >  2:1894167/1‑100 (MQ=255)
                 ggTAGCGAGGGGAAATGAAAGGTGCGCGTTGATTGTATTCGACATCCGATGCCGGATGCGTCGCTGACTCGTTTTATTTGGCCTACGAGGGGCACTGAAc                                                                                    <  2:3473906/99‑1 (MQ=255)
                 cGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAAc                                                                                    <  1:381930/100‑1 (MQ=255)
                 cGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAAc                                                                                    >  2:3190401/1‑100 (MQ=255)
                 cGTAGCCAGGTGAAACAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAAc                                                                                    <  1:3876055/100‑1 (MQ=255)
                  gTAGCCAGGTGAAATAAAAAACGCCCGTCGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGTCGCGACTTATCAGGCCTACGAGGTGCACTGAAc                                                                                    <  2:2356039/99‑1 (MQ=255)
                  gTAGCAAGGTGAAATAAAAAACGCCCGTTGTTTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACTAGGTGCACTGAACt                                                                                   <  2:1024870/100‑1 (MQ=255)
                   tAGCCAGGTGAAATAACAGTCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGAGGCGACTTATCAGGCCTACGAGGTGCACTGAAc                                                                                    <  2:3775171/98‑1 (MQ=25)
                   tAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGTCTACGAGGTGCACTGAACTg                                                                                  <  2:519998/100‑1 (MQ=255)
                    aGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                 <  1:3033813/100‑1 (MQ=255)
                     gCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGCCGCTGACGTGCCTCATCAGGCCTACGGCGTGGACTGAACTGTa                                                                                >  2:2730109/1‑100 (MQ=18)
                        aGGTGAAATAAAAAACGCCCGTTGTTTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGT                                                                             <  1:2129918‑M1/100‑1 (MQ=255)
                        aGGTGAAATAAAAAACGCCCGTTGATTGTATTAGAAAACCGAAGCCTGATGCGTCGCTGACGCTACTTATCAGGCCTACGAGGTGCACTGAACTGTAg                                                                               >  2:1713379/1‑98 (MQ=21)
                            gAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGA                                                                         <  2:3795105‑M1/100‑1 (MQ=255)
                            gAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGA                                                                         >  1:1142085‑M1/1‑100 (MQ=255)
                               aTAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGACGGATaa                                                                      >  1:777803/1‑100 (MQ=255)
                               aTAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCACGACTACGAGGTGCACTGAACTGTAGGTAGGATaa                                                                      >  2:3602240/1‑100 (MQ=255)
                                tAAAAAACGCCCGATGATTGTATTCGACAGCCGATGCCTGATACGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                     >  1:2652791/1‑100 (MQ=255)
                                 aaaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGa                                                                    >  1:3109290/1‑100 (MQ=255)
                                  aaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGAc                                                                   >  2:1326748/1‑100 (MQ=255)
                                   aaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACg                                                                  <  1:3301289/100‑1 (MQ=255)
                                       cGCCCGTTGATTGTATTTGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCCACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGAt                                                               <  2:2983202/99‑1 (MQ=255)
                                       cGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGAt                                                               >  2:2840633/1‑99 (MQ=255)
                                       cGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATg                                                              <  2:149063/100‑1 (MQ=255)
                                        gCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATgg                                                             <  1:2440759/100‑1 (MQ=255)
                                        gCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATgg                                                             >  1:1650486/1‑100 (MQ=255)
                                        gCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTAAACTGTAGGTCGGATAAGACCGAt                                                               >  1:2030506/1‑98 (MQ=255)
                                           cGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGt                                                          >  1:2172609/1‑100 (MQ=255)
                                             ttGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCg                                                        <  1:3574676/100‑1 (MQ=255)
                                                  tGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATcc                                                   <  1:12266/100‑1 (MQ=255)
                                                    tATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGa                                                 >  1:1978848/1‑100 (MQ=255)
                                                      ttgtaCAGCCGGTGCCTGATGCGTCGCAGGCGCGACTTATCAGGCCTACGAGGTGCACTCAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGAc                                                <  2:3048690/95‑1 (MQ=17)
                                                      ttCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATgcgacgccatccgtcttatccgacc                                               <  2:2628947‑M1/100‑26 (MQ=255)
                                                      ttCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCGGAcn                                               <  2:2534533/100‑2 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                            <  2:1681452/100‑1 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAAACGGATGGCGTAGCATCCGACAAcc                                            >  1:3771515/1‑100 (MQ=255)
                                                           cAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGa                                          >  2:3837568/1‑100 (MQ=255)
                                                            aGCCGATGTCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGa                                          <  1:531145/99‑1 (MQ=255)
                                                             gCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATg                                        <  1:1813986/100‑1 (MQ=255)
                                                               cGATGCCTGATGAGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGcc                                      >  1:2573272/1‑100 (MQ=255)
                                                                 aggcctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTg                                    <  2:1571544‑M2/66‑1 (MQ=255)
                                                                  ggcctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGa                                   >  2:1102001‑M2/34‑100 (MQ=255)
                                                                    CCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATg                                 >  2:2321048‑M1/1‑100 (MQ=255)
                                                                    CCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATg                                 >  1:2610635‑M1/1‑100 (MQ=255)
                                                                    CCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAACACGGATGGCGTCGCATCCGACAACCGATGCCTGATg                                 >  1:2762462‑M1/1‑100 (MQ=255)
                                                                     cTGATGCGTCGATGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACAGATGGCGTCGCATCCGACAACAGAtcggaagagc                                >  2:2048916/1‑91 (MQ=14)
                                                                     CTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgc                                <  1:1775641‑M1/100‑1 (MQ=255)
                                                                      TGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCgacaaccattgc                                       <  2:3871230‑M1/92‑6 (MQ=255)
                                                                       gataagtcgcgtcagcggcgcatcaggcCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATgcg                               >  1:555468‑M2/29‑99 (MQ=255)
                                                                         TGCGTCGCTGACGCGACTTATCAGGACTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATAGCGTAGAATACGACAAc                                             <  2:3539632‑M1/83‑1 (MQ=255)
                                                                          gCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                           <  1:2963465/100‑1 (MQ=255)
                                                                          gCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                           <  1:749175/100‑1 (MQ=255)
                                                                          gCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                           <  1:1552093/100‑1 (MQ=255)
                                                                            gTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                           >  2:2237975/1‑98 (MQ=255)
                                                                             tCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGa                        <  2:1307602/100‑1 (MQ=255)
                                                                              cGCTGTCGGGACTTATCATGCCTACGAGGTGCACTGAACTGTAGGTCGGATAATACGGATGGCGTCGCATCCGTCTACCTATGCCTGATGCGCCGCTGAc                       <  2:1580255/100‑1 (MQ=14)
                                                                                ttccgatctcTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGt                     <  2:1597105/91‑1 (MQ=255)
                                                                                cTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACg                      >  1:880894/1‑99 (MQ=255)
                                                                                 tGACGCGACTTATCAGTCTTACGAGGTGTTCTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAc                       <  1:1229053/97‑1 (MQ=14)
                                                                                 tGACGCGACTTATCAGGCCTACGAGGTGCACTGAATTGTAGGTTTGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                    <  1:3017830/100‑1 (MQ=255)
                                                                                 tGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                    >  1:1741893/1‑100 (MQ=255)
                                                                                 tGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                    <  1:3812742/100‑1 (MQ=255)
                                                                                   aCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                  <  1:1983611/100‑1 (MQ=255)
                                                                                   aCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                  <  1:72535/100‑1 (MQ=255)
                                                                                    cgcgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAGGCGAc                  >  2:1270321/1‑99 (MQ=255)
                                                                                    cgcgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACt                 >  2:1788667/1‑100 (MQ=255)
                                                                                        aCTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATc             <  1:323137/100‑1 (MQ=255)
                                                                                        aCTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATc             <  2:3107365/100‑1 (MQ=255)
                                                                                         cTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGtagatcggaa            >  1:1597120/1‑91 (MQ=255)
                                                                                          ttATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAg           >  2:598536/1‑100 (MQ=255)
                                                                                          ttATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAg           >  1:3631275/1‑100 (MQ=255)
                                                                                          ttATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAg           <  2:3281193/100‑1 (MQ=255)
                                                                                           tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAgg          >  1:846454/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAgg          >  2:58599/1‑100 (MQ=255)
                                                                                            atcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGc         >  1:496901‑M2/8‑100 (MQ=255)
                                                                                             tcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGc         <  2:734549‑M2/93‑1 (MQ=255)
                                                                                               aggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTa      >  1:3659607‑M2/5‑100 (MQ=255)
                                                                                               aggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCAGATACACCGCTGACGCGACTTATAAgg          >  2:1931262‑M2/5‑96 (MQ=255)
                                                                                                ggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACCGATGGCGTCGCATCCGACAACAGATGCCTGATGCGTCTCTGACGCGACTTATGAGGCCt       >  2:868959‑M2/4‑98 (MQ=255)
                                                                                                   cTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGTGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACggg  <  1:1203843/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGG  >  NC_000913/349538‑349736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.