New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2700550 =	154 (1.250)	16 (0.160)	15/160	9.8	12.1%	intergenic (‑353/+68)	shoB/acpS	toxic membrane protein/holo‑[acyl‑carrier‑protein] synthase 1
	?	NC_000913	2700601 =	109 (1.100)					intergenic (‑404/+17)	shoB/acpS	toxic membrane protein/holo‑[acyl‑carrier‑protein] synthase 1
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

GGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2700666‑2700550 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggggttttactttttaaAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTT  >  NC_000913/2700601‑2700698                                                                                                                                                                                                                         GGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACG                                                                                                                     >  1:2306206/1‑100  GCAGATGAGCGACACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAACACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGG                                                                                                                    <  1:1781294/100‑1   CAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGG                                                                                                                   <  1:2723627/100‑1    AGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGG                                                                                                                    <  2:2539348/98‑1        ccgtGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTT                                                                                                              >  1:420144/5‑100         AGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTT                                                                                                             >  2:608323/1‑100          GCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTA                                                                                                            >  1:2219836/1‑100             gtaaTATGCTTGTGCCACGGTAATAATTAAAAGTAAAAAATAATACGGTTCTCTTTAAAAATTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACT                                                                                                          <  2:627813/95‑1              CACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTT                                                                                                        <  2:61420/100‑1              CACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTT                                                                                                        >  2:1651595/1‑100              CACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTT                                                                                                        >  2:413495/1‑100               ACTATGCTTGTGCTACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTT                                                                                                        <  2:830227/99‑1               ACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTT                                                                                                       >  1:222619/1‑100               ACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTT                                                                                                       <  2:356866/100‑1               ACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTT                                                                                                       <  2:1091885/100‑1                CTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTGTACTTTTT                                                                                                      <  2:1360815/100‑1                 TATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTA                                                                                                     <  2:1247662/100‑1                 TATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTA                                                                                                     <  2:621764/100‑1                  ATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAA                                                                                                    >  1:1838277/1‑100                                           AAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTT                                                                           >  1:852544/1‑100                                                                 CTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGC                                                     >  1:2778133/1‑100                                                                  TTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCA                                                    >  1:905377/1‑100                                                                   TTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCAT                                                   >  1:2562469/1‑100                                                                      AAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGT                                                >  2:1727542/1‑100                                                                          GTAAAACCCCCAAACTGGTAAGGAACGGGTGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCC                                             <  2:3019799/99‑1                                                                           TAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGC                                           >  1:1099716/1‑100                                                                            AAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCT                                          >  1:185662/1‑100                                                                             AAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTC                                         >  1:2541515/1‑100                                                                             AAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGC                                              >  2:1511954/1‑95                                                                               ACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCAT                                       >  1:2678165/1‑100                                                                                CCCCCGAACTGGTAAGTAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATC                                      >  2:455362/1‑100                                                                                 CCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTTACTATCAATAATTACCGTGGCACAAGCATAGTCCCGCTCATC                                      >  2:1744325/1‑99                                                                                  CCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTG                                    >  2:1360145/1‑100                                                                                      AACTGGTAAGGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAG                                <  2:905368/100‑1                                                                                               GGAACGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATG                       <  2:852537/100‑1                                                                                                   CGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATA                   >  2:2833287/1‑100                                                                                                   CGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATA                   >  1:916528/1‑100                                                                                                   CGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATA                   >  2:2805714/1‑100                                                                                                    GGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATAT                  >  2:2542018/1‑100                                                                                                     GGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATT                 >  1:2911287/1‑100                                                                                                       GGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTG               <  2:1581175/100‑1                                                                                                       GGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTG               <  2:2778106/100‑1                                                                                                       GGTTTTACTTTTTAAAGAGAACGGTATTA‑TTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGC              <  1:271809/100‑1                                                                                                        GTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGC              <  2:828583/100‑1                                                                                                        GTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGC              <  1:1360157/100‑1                                                                                                         TTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGTCGCTCATCTGCCAGCGTTACATGCATATTTGCA             <  2:1781275/100‑1                                                                                                         TTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCA             >  1:2679360/1‑100                                                                                                         TTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCA             >  2:752479/1‑100                                                                                                         TTTTACTTTTTAAACACAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGATCCGCTCATCTGCCAGCGTTACATGCAT                    <  2:2805234/93‑1                                                                                                          TTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAA            >  2:68680/1‑100                                                                                                           TTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAAC           <  2:959986/100‑1                                                                                                            TACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACG          >  1:400903/1‑100                                                                                                              CTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCC        >  1:319883/1‑100                                                                                                              CTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCC        >  2:779380/1‑100                                                                                                               TTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCC       <  1:2956695/100‑1                                                                                                                 TTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAG     >  2:3048839/1‑100                                                                                                                  TTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGC    >  1:2626937/1‑100                                                                                                                  TTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGC    <  1:2543293/100‑1                                                                                                                   TAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCT   >  1:2915156/1‑100                                                                                                                   TAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCT   <  1:2474323/100‑1                                                                                                                    AAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTT  >  2:2920154/1‑100                                                                                                                    AAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCT   >  2:1844512/1‑99                                                                                                                     AAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCACAGCTT  >  2:2563891/1‑99                                                                                                                                                                                                                         GGCAGATGAGCGGCACTATGCTTGTGCCACGGTAATTATTGAAAGTTAAAAATAATACCGTTCTCTTTAAAAAGTAAAACCCCCGAACTGGTAAGGAACGGGGGTTTTACTTTTTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2700666‑2700550 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggggttttactttttaaAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCATAGTGCCGCTCATCTGCCAGCGTTACATGCATATTTGCAACGCCCAGCTT  >  NC_000913/2700601‑2700698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.