New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2700550 =154 (1.250)16 (0.160) 15/160 9.8 12.1% intergenic (‑353/+68) shoB/acpS toxic membrane protein/holo‑[acyl‑carrier‑protein] synthase 1
?NC_000913 2700601 = 109 (1.100)intergenic (‑404/+17) shoB/acpS toxic membrane protein/holo‑[acyl‑carrier‑protein] synthase 1
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 155 total aligned reads displayed.

CTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCAT  >  NC_000913/2700451‑2700649
                                                                                                   |                                                                                                   
cTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGt                                                                                                     >  2:271808/1‑100 (MQ=255)
  cGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTa                                                                                                   <  1:851273/100‑1 (MQ=255)
   gAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTaa                                                                                                  >  1:685276/1‑100 (MQ=255)
     gTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTaaaa                                                                                                <  2:1119688/100‑1 (MQ=255)
      tttttATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTaaaaa                                                                                               >  2:516549/1‑100 (MQ=255)
       ttttATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTaaaa                                                                                                <  2:1865184/98‑1 (MQ=255)
       ttttATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAg                                                                                              >  2:1876908/1‑100 (MQ=255)
        tttATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGt                                                                                             <  2:379895/100‑1 (MQ=255)
        tttATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGt                                                                                             <  1:499988/100‑1 (MQ=255)
        tttATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAACCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGt                                                                                             <  1:498873/100‑1 (MQ=255)
           aTGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTaaa                                                                                          <  1:2555753/100‑1 (MQ=255)
             gCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAc                                                                                        >  2:437138/1‑100 (MQ=255)
             gCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAc                                                                                        >  2:2116520/1‑100 (MQ=255)
              cTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAcc                                                                                       >  1:1905962/1‑100 (MQ=255)
               tAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAccc                                                                                      >  1:2656190/1‑100 (MQ=255)
               tAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAccc                                                                                      >  1:2617822/1‑100 (MQ=255)
                aaaGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAcccc                                                                                     <  1:1728314/100‑1 (MQ=255)
                 aaGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAccccc                                                                                    <  2:3047963/100‑1 (MQ=255)
                 aaGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAAccccc                                                                                    <  2:1849509/100‑1 (MQ=255)
                  aGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCg                                                                                   <  1:155198/100‑1 (MQ=255)
                    aTTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGtt                                                                                 <  1:519720/100‑1 (MQ=255)
                      tGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTcc                                                                               <  2:180224/100‑1 (MQ=255)
                       gCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCt                                                                              >  1:2571272/1‑100 (MQ=255)
                       gCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCt                                                                              >  1:2354351/1‑100 (MQ=255)
                        cAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCtt                                                                             >  1:1581192/1‑100 (MQ=255)
                        cAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCtt                                                                             <  1:802042/100‑1 (MQ=255)
                        cAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCtt                                                                             >  1:2611823/1‑100 (MQ=255)
                         aaGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTa                                                                            <  2:2401964/100‑1 (MQ=255)
                           gTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTAcc                                                                          <  1:33837/100‑1 (MQ=255)
                           gTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTAcc                                                                          >  2:2306183/1‑100 (MQ=255)
                             tGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAg                                                                        <  1:1201975/100‑1 (MQ=255)
                               cTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGtt                                                                      >  2:1838257/1‑100 (MQ=255)
                               cTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGtt                                                                      >  2:1492861/1‑100 (MQ=255)
                                ttGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTc                                                                     <  1:2154575/100‑1 (MQ=255)
                                 tGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCg                                                                    >  1:1690701/1‑100 (MQ=255)
                                  gTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgg                                                                   >  1:2588947/1‑100 (MQ=255)
                                  gTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgg                                                                   <  2:685273/100‑1 (MQ=255)
                                   tAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCggg                                                                  >  1:384976/1‑100 (MQ=255)
                                    aaaaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgggg                                                                 <  2:889676/100‑1 (MQ=255)
                                    aaaaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgggg                                                                 >  2:2829013/1‑100 (MQ=255)
                                    aaaaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCgggg                                                                 <  2:3025355/100‑1 (MQ=255)
                                      aaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGt                                                               <  2:950496/100‑1 (MQ=255)
                                      aaGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGt                                                               >  1:570150/1‑100 (MQ=255)
                                       aGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCGGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGtt                                                              >  1:1780575/1‑100 (MQ=255)
                                         aTAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGtttt                                                            <  2:1608622/100‑1 (MQ=255)
                                         aTAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGtttt                                                            <  2:2382624/100‑1 (MQ=255)
                                           aaGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTAc                                                          <  1:1267424/100‑1 (MQ=255)
                                            aGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACt                                                         <  1:2214433/100‑1 (MQ=255)
                                            aGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACt                                                         <  1:836426/100‑1 (MQ=255)
                                             gTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACtt                                                        >  1:3056078/1‑100 (MQ=255)
                                               acacTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACtttt                                                      <  2:2506681/100‑1 (MQ=255)
                                                  cTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTaa                                                   <  2:2814991/100‑1 (MQ=255)
                                                    gATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAag                                                 >  2:2543270/1‑100 (MQ=255)
                                                    gATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAag                                                 >  2:1265052/1‑100 (MQ=255)
                                                     aTCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAaga                                                <  1:1818953/100‑1 (MQ=255)
                                                       ccATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAgaga                                              <  1:1824396/100‑1 (MQ=255)
                                                       ccATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAgaga                                              <  1:2606678/100‑1 (MQ=255)
                                                         aTAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAAc                                            <  2:398051/100‑1 (MQ=255)
                                                          tAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACg                                           <  2:724799/100‑1 (MQ=255)
                                                           aaTCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACgg                                          >  1:739523/1‑100 (MQ=255)
                                                              cGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGtat                                       >  1:1376123/1‑100 (MQ=255)
                                                                 tgttgtTGAGGGTGCATGCTGCACAAAATTAAACTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGGACGGtattat                                    >  2:2030207/1‑100 (MQ=255)
                                                                  gttgttGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTattatt                                   <  1:1492875/100‑1 (MQ=255)
                                                                  gttgttGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTattatt                                   <  1:179043/100‑1 (MQ=255)
                                                                    tgttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAtttt                                 >  2:1140250/1‑100 (MQ=255)
                                                                    tgttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAtttt                                 >  2:793224/1‑100 (MQ=255)
                                                                    tgttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAtttt                                 >  1:959997/1‑100 (MQ=255)
                                                                     gttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAttttt                                >  2:2604499/1‑100 (MQ=255)
                                                                     gttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAttttt                                >  1:2549211/1‑100 (MQ=255)
                                                                     gttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTAttttt                                >  2:768550/1‑100 (MQ=255)
                                                                      ttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAATCCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTa                               <  2:194253/100‑1 (MQ=255)
                                                                      ttgAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTa                               >  1:2564759/1‑100 (MQ=255)
                                                                        gAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAAc                             <  2:192682/100‑1 (MQ=255)
                                                                         aGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACt                            <  2:464413/100‑1 (MQ=255)
                                                                          gggTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACtt                           >  1:1317470/1‑100 (MQ=255)
                                                                           ggTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACttt                          <  1:1514260/100‑1 (MQ=255)
                                                                           ggTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACttt                          >  1:1614460/1‑100 (MQ=255)
                                                                            gTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAACCCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTc                         <  2:533960/100‑1 (MQ=255)
                                                                            gTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTc                         <  2:2203735/100‑1 (MQ=255)
                                                                             tGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCa                        <  2:47311/100‑1 (MQ=255)
                                                                             tGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCa                        <  1:2343316/100‑1 (MQ=255)
                                                                             tGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTCTTAAAGAGAACGGTATTATTTTTAACTTTCa                        >  2:1193028/1‑100 (MQ=255)
                                                                               cATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCaat                      <  1:2829040/100‑1 (MQ=255)
                                                                               cATGCTGCAAAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGGTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCaat                      <  1:2822385/100‑1 (MQ=255)
                                                                                aTGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCaata                     >  1:1724624/1‑100 (MQ=255)
                                                                                 ttctgcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTGACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCaataa                    >  1:2085834/3‑100 (MQ=255)
                                                                                    tgcACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTa                 <  2:2205030/100‑1 (MQ=255)
                                                                                     gcACAAAATTAAAGTTAAAAAGTAAAACCCACGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTACAATAATTAc                >  2:2033395/1‑100 (MQ=255)
                                                                                      cacaAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTAcc               >  2:1581179/1‑100 (MQ=255)
                                                                                      cacaAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTAcc               >  1:2134780/1‑100 (MQ=255)
                                                                                        caAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGt             <  2:2354328/100‑1 (MQ=255)
                                                                                        caAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTATTTAAAGACAACGGTATTATTTTTAACTTTCAATAATTAc                >  2:1390727/1‑97 (MQ=255)
                                                                                           aaTTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGc          >  1:816156/1‑100 (MQ=255)
                                                                                            aTTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGca         <  1:225095/100‑1 (MQ=255)
                                                                                            aTTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGca         >  1:1563994/1‑100 (MQ=255)
                                                                                            aTTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGca         <  2:872526/100‑1 (MQ=255)
                                                                                                 aGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGc    >  1:2601904/1‑100 (MQ=255)
                                                                                                  gTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCa   >  1:2722238/1‑100 (MQ=255)
                                                                                                  gTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCa   >  2:2750793/1‑100 (MQ=255)
                                                                                                   ttAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCAt  <  1:1838277/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTCGAGTTTTTATGCTAAAGATTGCAAGTTGCTTGTAAAAGATAAGTACACTGATCCATAATCGCTGTTGTTGAGGGTGCATGCTGCACAAAATTAAAGTTAAAAAGTAAAACCCCCGTTCCTTACCAGTTCGGGGGTTTTACTTTTTAAAGAGAACGGTATTATTTTTAACTTTCAATAATTACCGTGGCACAAGCAT  >  NC_000913/2700451‑2700649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.