| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2950598 = | NA (NA) | 21 (0.150) | 10/158 | NT | NA | intergenic (+25/+37) | argA/recD | amino acid N‑acetyltransferase and inactive acetylglutamate kinase/exonuclease V (RecBCD complex), alpha chain |
| ? | NC_000913 | 2950615 = | NA (NA) | noncoding (3/14 nt) | REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
CAATCGCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATgtcgcatccg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2950696‑2950598‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGCAT > NC_000913/2950615‑2950723 CAATCGCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATG < 2:4021690/100‑1CAATCGCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATG > 2:422786/1‑100 TCGGCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCG < 1:1724686/100‑1 TCGCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCG < 2:2959332/100‑1 TCGCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCG < 2:1849732/100‑1 TCGCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCG < 1:393588/100‑1 TCGCCACTCGTACTGAGCAGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCG < 2:1263485/100‑1 TCGCCACGCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCG > 2:2319203/1‑100 GCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCGCA > 2:1686076/1‑100 GCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCGCA > 2:2652796/1‑100 CCACTCGGACTGGGCGGCGCAGGCGGCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAAGTGCCGGATGCGACGTACGAGTGTTACGCATGTCG < 1:353821/97‑1 ACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCGCATCC < 2:1969444/100‑1 CTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTGGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCAGGTCGCATCCG > 1:2901941/1‑100 GTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTAAGCATGTCGCATCCGGCGATTACGTTGATTCCCGTGAACTAAACCACGCAGCCA > 1:3943759/1‑100 GAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGACTACGTTTATTCCCGTGTACTAAACAACGCCGCCAGACCACTG > 1:2692059/1‑100 AAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCC > 1:1510258/1‑100 ACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGC > 1:2533254/1‑100 ACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGC > 1:3208877/1‑100 CCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACGACGCCGCCAGACCACTGCGCCGCTCAGTACG > 2:1426000/1‑99 CGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTAC > 2:3912414/1‑97 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGT > 2:3033619/1‑100 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGT > 2:4182348/1‑100 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGT > 1:295575/1‑100 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGT > 1:2936805/1‑100 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGT > 2:1740265/1‑100 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGT > 2:2630387/1‑100 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGT > 2:2111243/1‑100 GATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTG > 2:1215547/1‑100 GATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTG > 2:1219287/1‑100 GATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTG > 2:531754/1‑100 GATGCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTG > 1:1721214/1‑100 GATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTG > 2:1318882/1‑100 GCGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCG > 2:1874537/1‑100 CGACGTACGAGTGTTACGCATGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGA > 2:105461/1‑100 GTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCT > 1:1242385/1‑100 GTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCT > 2:2048590/1‑100 GTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCT > 2:634481/1‑100 GTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCT > 2:1635088/1‑100 TCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTC > 1:1463139/1‑100 CGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCA < 2:1681645/100‑1 GCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCAT > 2:846591/1‑100 GCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCAT > 2:194934/1‑100 GCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCAT > 2:1198737/1‑100 TCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGG > 1:1506213/1‑100 CCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGC < 2:2516515/100‑1 CCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGC < 2:1845724/100‑1 CCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGC < 1:4135228/100‑1 CCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGC > 1:1907324/1‑100 CGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGCA < 1:684781/100‑1 CGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGCA < 1:2178522/100‑1 CGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAATGGCGACTGCCGCACTTAATATGCGCTCATCGG > 1:1414989/1‑98 GGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGCAT > 1:690131/1‑100 GGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGAGATTGCAGCACTTAATATGCGCTCATCGGCAT > 1:583241/1‑100 CAATCGCCACTCGTACTGAGCGGCGCAGTGGTCTGGCGGCGTTGTTTAGTTCACGGGAATAAACGTAATTGCCGGATGCGACGTACGAGTGTTACGCATgtcgcatccg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2950696‑2950598‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGCCGCACTTAATATGCGCTCATCGGCAT > NC_000913/2950615‑2950723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |