New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2950598 =NA (NA)21 (0.150) 10/158 NT NA intergenic (+25/+37) argA/recD amino acid N‑acetyltransferase and inactive acetylglutamate kinase/exonuclease V (RecBCD complex), alpha chain
?NC_000913 2950615 = NA (NA)noncoding (3/14 nt) REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 208 total aligned reads displayed.

TTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950499‑2950697
                                                                                                   |                                                                                                    
 tACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGCTGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACAt                                                                                                     >  1:383548/1‑100 (MQ=255)
 tACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACAt                                                                                                     >  2:1705379/1‑100 (MQ=255)
   cTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGc                                                                                                   >  2:3204605/1‑100 (MQ=255)
   cTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGc                                                                                                   >  1:511820/1‑100 (MQ=255)
   cTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATATAGGGTAAGCGATGAAAATCGTCGGATGCGACATGc                                                                                                   >  1:672043/1‑100 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                 <  2:672044/100‑1 (MQ=255)
     gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                 <  2:3907760/100‑1 (MQ=255)
      cccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                                >  2:2901958/1‑100 (MQ=255)
      cccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                                >  2:937645/1‑100 (MQ=255)
          agagCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAacac                                                                                            <  2:602670/100‑1 (MQ=255)
           gagCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACt                                                                                           <  1:1801567/100‑1 (MQ=255)
           gagCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACt                                                                                           >  2:3611067/1‑100 (MQ=255)
            agaaaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGGAAGCGATAAAAATCTTCGGAGGCTACATGCGTAACACTc                                                                                          >  1:3018026/4‑100 (MQ=255)
            agCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTc                                                                                          <  1:3716080/100‑1 (MQ=255)
            agCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTc                                                                                          <  1:1665759/100‑1 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                         >  2:4110848/1‑100 (MQ=255)
             gCAAAAAGCAGTTGTACAACTACCAGCGTAAAACCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                         >  2:4184077/1‑100 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGGCATGCGTAACACTCGTa                                                                                       >  2:3514779/1‑100 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                       >  2:2178529/1‑100 (MQ=255)
               aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                       <  2:2348870/100‑1 (MQ=255)
               aaaaaGCAGTTGTACAACTAACAGCGTAAATCCAAAGTGTTGATGGCGGATGTAGGGTAAGCGATGAAAATCGTAGGATGCGACATGCGTAACACTCg                                                                                         >  1:2699616/1‑98 (MQ=255)
                aaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTAc                                                                                      >  2:3447996/1‑100 (MQ=255)
                     cAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCg                                                                                 >  1:3571794/1‑99 (MQ=255)
                       gTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCAt                                                                              <  1:296357/100‑1 (MQ=255)
                        cactcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATc                                                                             >  2:1215547‑M1/76‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:2936805‑M1/75‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  2:1740265‑M1/75‑100 (MQ=255)
                         actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  2:3033619‑M1/75‑100 (MQ=255)
                            cgtactgagcggcgcagtggtctggcggcgtcgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCgg                                                                          >  2:1426000‑M1/72‑99 (MQ=255)
                            aCAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGc                                                                         >  1:3909372/1‑100 (MQ=255)
                            aCAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGc                                                                         <  1:4370150/100‑1 (MQ=255)
                            aCAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGc                                                                         >  1:4107098/1‑100 (MQ=255)
                             cAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCa                                                                        <  2:1349285/100‑1 (MQ=255)
                             cAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCa                                                                        >  2:2073551/1‑100 (MQ=255)
                             cAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCa                                                                        >  2:2390170/1‑100 (MQ=255)
                              aaCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCaa                                                                       <  1:763402/100‑1 (MQ=255)
                                    gcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaatcgtcggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGt                                                                 >  1:2533254‑M1/64‑100 (MQ=255)
                                     aGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGtt                                                                <  2:4328545/100‑1 (MQ=255)
                                      gCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGttt                                                               <  1:2328293/100‑1 (MQ=255)
                                       cGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTa                                                              <  2:1256520/100‑1 (MQ=255)
                                       cGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTa                                                              >  2:1513089/1‑100 (MQ=255)
                                         tagaTCCAAAGTGTTGAGGGCGGTTGTAGGGTAAACGACGAAAATCGCCGGATGAGACATGCTTTAAATTCTACTGTGGCATCCGGCAATTACGCTTAt                                                             <  1:1589269/96‑1 (MQ=255)
                                         tAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTAtt                                                            >  2:2752365/1‑100 (MQ=255)
                                          aaaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTc                                                           <  1:650508/100‑1 (MQ=255)
                                          aaaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTc                                                           <  1:351722/100‑1 (MQ=255)
                                           aaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTcc                                                          <  1:1886414/100‑1 (MQ=255)
                                            aTCGAAAGAGTTGATGGCGGATTTAGGGTAAGCGATGACAAGCGGCGGAGGCGACATGCGTAACACTCGTACGTCGCATCCGGCAAATAAGATTATTc                                                           >  1:2730525/1‑98 (MQ=255)
                                            aTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTccc                                                         >  1:1571585/1‑100 (MQ=255)
                                            aTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGCCGCATCCGGCAACTACGTGTATTccc                                                         >  1:4071453/1‑100 (MQ=255)
                                             tCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGCAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCg                                                        <  2:3094329/100‑1 (MQ=255)
                                              ccAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGt                                                       >  2:145230/1‑100 (MQ=255)
                                               cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      <  2:3952210/100‑1 (MQ=255)
                                               cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      >  2:3770536/1‑100 (MQ=255)
                                                  tccgatcttGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAAc                                                   <  2:832303/92‑1 (MQ=255)
                                                  aGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAAc                                                   <  1:3204587/100‑1 (MQ=255)
                                                  aGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAAc                                                   <  1:3110237/100‑1 (MQ=255)
                                                    tgtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTa                                                 <  1:2196001/100‑1 (MQ=255)
                                                       tGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaac                                              >  2:4037368/1‑100 (MQ=255)
                                                       tGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaac                                              <  2:1632737/100‑1 (MQ=255)
                                                       tGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaac                                              >  2:2234882/1‑100 (MQ=255)
                                                         aTGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAcaca                                             >  1:1518298/1‑99 (MQ=255)
                                                          tGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAAcagatcgga                                           >  1:832302/1‑92 (MQ=255)
                                                          tGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaac                                           <  1:3393041/100‑1 (MQ=255)
                                                           ggCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacagat                                          >  1:2802555/1‑97 (MQ=255)
                                                           ggCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcg                                          >  1:579724/1‑100 (MQ=255)
                                                           ggCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcg                                          >  2:512646/1‑100 (MQ=255)
                                                           ggCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcg                                          >  2:4135259/1‑100 (MQ=255)
                                                            gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         >  2:2596571/1‑100 (MQ=255)
                                                                aTTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACgccgcc                                     <  1:3636651/100‑1 (MQ=255)
                                                                 tttAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCa                                    >  2:2226731/1‑100 (MQ=255)
                                                                   tAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGa                                  >  2:2083927/1‑100 (MQ=255)
                                                                   tAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGa                                  >  1:3263791/1‑100 (MQ=255)
                                                                    aGGGTAAGCGATGAAACTCGTCGGATGCCACATGCGTCACCCTCGTAAGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAACGAACgccgcc                                     <  1:768177/96‑1 (MQ=255)
                                                                    aGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGat                                 >  1:4125843/1‑99 (MQ=255)
                                                                    aGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAc                                 >  1:397781/1‑100 (MQ=255)
                                                                     gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAcc                                <  2:26713/100‑1 (MQ=255)
                                                                     gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAcc                                <  1:3298790/100‑1 (MQ=255)
                                                                     gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAcc                                <  2:715878/100‑1 (MQ=255)
                                                                      gggaaGCGCTGACAATCGTCGGTTGCGACATGCGTAACACTCGTACGTCGCATTCGGCAATGACGATTATTCCCGTTAAGTAAACAACGCCGTCatag                                 <  1:1083066/95‑4 (MQ=255)
                                                                        tAAGCGATGAAACTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACt                             <  1:2844938/100‑1 (MQ=255)
                                                                            cGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgcgc                         <  2:1876620/100‑1 (MQ=255)
                                                                              aTGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAAATACGTTTATTCCCGTGCACTAAACAACGCCGCCAGACCACTgcgc                         >  1:1217184/1‑98 (MQ=255)
                                                                               tGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgccgc                      >  2:1279879/1‑100 (MQ=255)
                                                                                gAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCt                     >  1:2099068/1‑100 (MQ=255)
                                                                                  aaaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCa                   >  1:3787842/1‑100 (MQ=255)
                                                                                  aaaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCa                   >  1:1506599/1‑100 (MQ=255)
                                                                                  aaaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCa                   >  1:2879363/1‑100 (MQ=255)
                                                                                    aTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGt                 <  1:224731/100‑1 (MQ=255)
                                                                                       gtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACg              >  2:106381/1‑100 (MQ=255)
                                                                                       gtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACg              >  1:1849332/1‑100 (MQ=255)
                                                                                         cggatgcgacCTGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACCACGCCGCCAGACCACTGCGCCGCTCAGTACGAg            >  1:2901941‑M1/11‑100 (MQ=255)
                                                                                             tgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGc        >  2:2652796‑M1/7‑100 (MQ=255)
                                                                                               cgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGa      <  1:393588‑M1/96‑1 (MQ=255)
                                                                                               cgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGa      <  2:2959332‑M1/96‑1 (MQ=255)
                                                                                               cgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGa      <  2:1849732‑M1/96‑1 (MQ=255)
                                                                                               cgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGCCGa      <  1:1724686‑M1/96‑1 (MQ=255)
                                                                                                  cATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTg   <  2:4021690‑M1/99‑1 (MQ=255)
                                                                                                  cATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTg   >  2:422786‑M1/2‑100 (MQ=255)
                                                                                                   aTGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGc  >  2:4176413/1‑100 (MQ=255)
                                                                                                   aTGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGc  <  2:2341849/100‑1 (MQ=255)
                                                                                                   |                                                                                                    
TTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950499‑2950697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.