New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3622174NA (NA)14 (0.090) 6/168 NT 100% coding (2983/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3622205 0 (0.000)coding (3014/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

AGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGacccg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3622076‑3622174
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGACT  <  NC_000913/3622205‑3622102
                                                                                                                                                                                                           
AGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGA                                                                                                         >  2:1745006/1‑100
AGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGA                                                                                                         >  2:349066/1‑100
AGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGA                                                                                                         >  1:2619853/1‑100
AGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGA                                                                                                         >  2:51587/1‑100
 GCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGAC                                                                                                        >  1:1715690/1‑100
 GCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGAC                                                                                                        >  1:68251/1‑100
  CGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACC                                                                                                       <  2:490852/100‑1
   GGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCC                                                                                                      >  1:3823034/1‑100
    GACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCG                                                                                                     >  1:2054813/1‑100
         ACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAAAATGAAGACCCGCTGGTCGAAAGTCGCTATCTTTACGACCC                                                                                                      >  1:776335/1‑94
                                CACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCG                                                                         <  2:2601372/100‑1
                                 ACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGT                                                                        <  1:4252340/100‑1
                                  CCGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGCCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTA                                                                       <  2:895314/100‑1
                                   CGGCTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCG                                                                         <  1:1630595/97‑1
                                    GGCTGGTGCACTACACGCGGCCACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAA                                                                     <  1:553499/100‑1
                                     GCTGGTGCACTACACGCGGACACAATATGCAGCGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTCTTGCCACCCTGCGGCCCAGCGGGTCGTAAAG                                                                    <  1:4031176/100‑1
                                     GCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAG                                                                    <  1:3159990/100‑1
                                      CTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGCCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGA                                                                   <  2:2558700/100‑1
                                      CTGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGCCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGA                                                                   <  1:4248529/100‑1
                                       TGGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGAT                                                                  <  2:1151426/100‑1
                                        GGTGCACTACACGCGGACACAATATGCAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATA                                                                 <  1:459167/100‑1
                                          TGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGC                                                               <  2:1554076/100‑1
                                          TGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGC                                                               <  1:1868180/100‑1
                                           GCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCG                                                              <  2:3185076/100‑1
                                                                                                   ACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCT      <  2:902480/100‑1
                                                                                                   ACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCT      >  2:152227/1‑100
                                                                                                   ACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCT      >  2:4204518/1‑100
                                                                                                   ACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGC       <  1:1871477/99‑1
                                                                                                   ACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGC       <  1:3463660/99‑1
                                                                                                    CCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCGGCGGCCCTTCATATTGTGTCCGCGTGTCGTGCACCCGCCGGTGCT      >  1:707444/1‑99
                                                                                                    CCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCac     <  2:126750/100‑3
                                                                                                    CCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCac     <  1:3069457/100‑3
                                                                                                    CCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTG     >  1:2997115/1‑100
                                                                                                    CCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTG     <  2:103091/100‑1
                                                                                                    CCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTG     >  1:4362681/1‑100
                                                                                                    CCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCT      <  1:1593391/99‑1
                                                                                                    CCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGGGTAGTGCACCAGCCGGTGCTG     <  1:1230280/100‑1
                                                                                                    CCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGACCGCGTGTAGTGCACCAGCCGGTGCTG     >  1:4151143/1‑100
                                                                                                     CCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCact    <  2:2563037/100‑4
                                                                                                     CCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCact    <  2:1010435/100‑4
                                                                                                     CCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCact    <  2:2609317/100‑4
                                                                                                     CCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCact    <  2:432577/100‑4
                                                                                                     CCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCact    <  1:3513626/100‑4
                                                                                                     CCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGA    >  2:353721/1‑100
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGGTAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGAC   <  1:3697434/100‑1
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCacta   <  1:1314035/100‑5
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCacta   <  2:3958996/100‑5
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGAC   >  2:1364040/1‑100
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGAC   <  2:1311995/100‑1
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGAC   <  2:3516621/100‑1
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGAC   >  2:3106277/1‑100
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGAC   <  2:1596283/100‑1
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGAC   <  2:2381176/100‑1
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGAC   <  1:2841690/100‑1
                                                                                                      CGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGAC   >  2:2418249/1‑100
                                                                                                       GTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCGGCTGGTGCactac  <  1:637070/100‑6
                                                                                                       GTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGACT  <  2:3941593/100‑1
                                                                                                       GTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGACT  >  1:4048788/1‑100
                                                                                                       GTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGACT  <  2:1764764/100‑1
                                                                                                                                                                                                           
AGCGGACTCACCGGTACCATTACGACAGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGacccg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3622076‑3622174
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCCGTTTTGCCACCCTGCGGCCCAGCGGGTCGTAAAGATAGCGACTTTCGACCAGCGGCTCTTCATATTGTGTCCGCGTGTAGTGCACCAGCCGGTGCTGACT  <  NC_000913/3622205‑3622102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.