| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3622174 | NA (NA) | 14 (0.090) | 6/168 | NT | 100% | coding (2983/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3622205 | 0 (0.000) | coding (3014/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
AGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTAC > NC_000913/3622102‑3622272 | gtagtgcaccaGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAAC < 1:637070‑M2/95‑1 (MQ=255)aGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAAC < 2:3941593‑M2/100‑1 (MQ=255)aGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAAC < 2:1764764‑M2/100‑1 (MQ=255)aGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAAC > 1:4048788‑M2/1‑100 (MQ=255) tagtgcaccAGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG < 1:1314035‑M2/96‑1 (MQ=255) tagtgcaccAGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG < 2:3958996‑M2/96‑1 (MQ=255) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG < 2:2381176‑M2/100‑1 (MQ=255) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG > 2:2418249‑M2/1‑100 (MQ=255) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG < 2:1596283‑M2/100‑1 (MQ=255) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG > 2:1364040‑M2/1‑100 (MQ=255) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG > 2:3106277‑M2/1‑100 (MQ=255) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG < 2:1311995‑M2/100‑1 (MQ=255) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG < 2:3516621‑M2/100‑1 (MQ=255) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG < 1:2841690‑M2/100‑1 (MQ=255) gTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTACCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACG < 1:3697434‑M2/100‑1 (MQ=255) tCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGG > 2:353721‑M2/1‑100 (MQ=255) agtgcacCAGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGG < 2:1010435‑M2/97‑1 (MQ=255) agtgcacCAGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGG < 2:2563037‑M2/97‑1 (MQ=255) agtgcacCAGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGG < 1:3513626‑M2/97‑1 (MQ=255) agtgcacCAGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGG < 2:2609317‑M2/97‑1 (MQ=255) agtgcacCAGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGG < 2:432577‑M2/97‑1 (MQ=255) gtgcaCCAGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGG < 1:3069457‑M2/98‑1 (MQ=255) gtgcaCCAGCCGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGG < 2:126750‑M2/98‑1 (MQ=255) cAGCACCGGCTGGTGCACTACCCGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGG < 1:1230280‑M2/100‑1 (MQ=255) cAGCACCGGCTGGTGCACTACACGCGGTCACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGG > 1:4151143‑M2/1‑100 (MQ=255) cAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGG < 2:103091‑M2/100‑1 (MQ=255) cAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGG > 1:2997115‑M2/1‑100 (MQ=255) cAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGG > 1:4362681‑M2/1‑100 (MQ=255) aGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGT < 2:902480‑M2/100‑1 (MQ=255) aGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGT > 2:152227‑M2/1‑100 (MQ=255) aGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGT > 2:4204518‑M2/1‑100 (MQ=255) aGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGG < 1:1593391‑M2/99‑1 (MQ=255) aGCACCGGCGGGTGCACGACACGCGGACACAATATGAAGGGCCGCCGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGG > 1:707444‑M2/1‑99 (MQ=255) gCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGT < 1:3463660‑M2/99‑1 (MQ=255) gCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGT < 1:1871477‑M2/99‑1 (MQ=255) cGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgc < 2:3185076‑M2/100‑57 (MQ=255) gCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgca < 1:1868180‑M2/100‑58 (MQ=255) gCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgca < 2:1554076‑M2/100‑58 (MQ=255) tATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtgcacc < 1:459167‑M2/100‑60 (MQ=255) aTCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtgcacca < 2:1151426‑M2/100‑61 (MQ=255) tCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcggctttcgaccagcggctctgcatattgtgtccgcgtgtagtgcaccag < 1:4248529‑M2/100‑62 (MQ=255) tCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcggctttcgaccagcggctctgcatattgtgtccgcgtgtagtgcaccag < 2:2558700‑M2/100‑62 (MQ=255) cTTTACGACCCGCTGGGCCGCAGGGTGGCAAGACGGGTcgtaaagatagcgactttcgaccagcggcgctgcatattgtgtccgcgtgtagtgcaccagc < 1:4031176‑M2/100‑63 (MQ=255) cTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagc < 1:3159990‑M2/100‑63 (MQ=255) tttACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctcttcatattgtggccgcgtgtagtgcaccagcc < 1:553499‑M2/100‑64 (MQ=255) tACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcggctttcgaccagcggctctgcatattgtgtccgcgtgtagtgcaccagccgg < 2:895314‑M2/100‑66 (MQ=255) aCGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggt < 1:4252340‑M2/100‑67 (MQ=255) cGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtg < 2:2601372‑M2/100‑68 (MQ=255) cGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTcgtaaagatagcgactttcgaccagcggctctgcatattgtgtccgcgtgtagtgcaccagccg < 1:1630595‑M2/97‑65 (MQ=255) | AGTCAGCACCGGCTGGTGCACTACACGCGGACACAATATGAAGAGCCGCTGGTCGAAAGTCGCTATCTTTACGACCCGCTGGGCCGCAGGGTGGCAAAACGGGTGTGGCGGCGTGAACGGGACCTGACGGGCTGGATGTCGCTGTCACGGAAACCGCAAGTGACCTGGTAC > NC_000913/3622102‑3622272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |