| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4168341 | 16 (0.100) | 14 (0.100) | 10/158 | NT | 49.7% | intergenic (+141/‑31) | rrsB/gltT | 16S ribosomal RNA of rrnB operon/tRNA‑Glu |
| ? | NC_000913 | = 4168363 | NA (NA) | intergenic (+163/‑9) | rrsB/gltT | 16S ribosomal RNA of rrnB operon/tRNA‑Glu | |||||
Only 100 of 128 total aligned reads displayed.
GATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCC > NC_000913/4168242‑4168435 | gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT > 1:3616032‑M1/1‑100 (MQ=255)gATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT > 1:3368501‑M1/1‑100 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:868689‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:4021748‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:3860332‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:3810097‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 1:3972992‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:3628979‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:1388684‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:330950‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:3273744‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:1855808‑M1/10‑1 (MQ=255)ctcacaaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAat < 2:2085451‑M1/10‑1 (MQ=255) tataaaGTGAAAAGCAAGGCGTTTACGCGTTGGTAGTGAGTCTGAAGAGAATAAGGCCGTCCACTTTCTATTACTAAAAGCTCACCCTACACGAAAat‑‑‑‑‑a < 1:2999259/96‑1 (MQ=11) gAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAat‑‑‑‑‑at > 1:2303031/1‑98 (MQ=33) gAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCa > 2:2587271/1‑100 (MQ=35) gAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCa < 1:3804824/100‑1 (MQ=33) caaaccagcaagtggcgtcccctaggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCa < 1:582395‑M1/14‑1 (MQ=255) aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCAc < 1:4400797/100‑1 (MQ=33) aaaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCAc < 2:3601870/100‑1 (MQ=33) aaGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCAc > 1:1732752/1‑99 (MQ=33) aggggaaagcaaagcGTTTACGCGTTGGGGGTGAGGCTGAAGAGAATACGGCCGTTCGCTTTGTATGGATGGCAGGTTACCCTACACGAAAat‑‑‑‑‑at < 1:2421539/90‑1 (MQ=11) aGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCAc < 1:3662070/98‑1 (MQ=32) gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGATAAT‑‑‑‑‑ATCACGCa > 1:3971309/1‑100 (MQ=18) gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCACGCa > 1:2085444/1‑100 (MQ=33) gTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCACGCa < 2:2607260/100‑1 (MQ=33) tGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCACGCaa > 1:4309897/1‑100 (MQ=32) tGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCACGCaa > 1:4098694/1‑100 (MQ=32) gAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCACGCAAc > 1:1083158/1‑100 (MQ=32) gAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCACGCAAc > 2:3860938/1‑100 (MQ=32) gAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCACGCAAc > 1:313510/1‑100 (MQ=32) tACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAatcacgcgttgcgtgatattttcgt < 2:3648894‑M1/100‑26 (MQ=255) taggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAATTGCTTATCACGCAACGCGTGATAAGc > 2:915961‑M1/65‑100 (MQ=255) ggggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAATTGCTTATCACGCAACGCGTGATAAGCaa > 2:2519273‑M1/63‑100 (MQ=255) ggattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgt > 1:514304‑M1/61‑100 (MQ=255) ttGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtg < 2:3753982‑M1/100‑32 (MQ=255) ttGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtg < 2:1991365‑M1/100‑32 (MQ=255) gattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTcgtn > 2:2119281‑M1/60‑99 (MQ=255) gattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgtg > 1:2749771‑M1/60‑100 (MQ=255) gattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgtg > 1:2467133‑M1/60‑100 (MQ=255) gattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgtg > 2:367409‑M1/60‑100 (MQ=255) gattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgtg > 2:4066993‑M1/60‑100 (MQ=255) gattcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgtg > 2:2744052‑M1/60‑100 (MQ=255) tGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgt < 1:675916‑M1/100‑33 (MQ=255) attcgtgcccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAAGTTTCgtgt > 1:2054931‑M1/59‑100 (MQ=255) attcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgtgt > 2:3295721‑M1/59‑100 (MQ=255) attcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgtgt > 1:3061834‑M1/59‑100 (MQ=255) attcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgtgt > 2:582397‑M1/59‑100 (MQ=255) attcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCgtgt > 1:1643585‑M1/59‑100 (MQ=255) ttcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTc > 2:1199612‑M1/58‑100 (MQ=255) gggAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgta < 2:3402547‑M1/100‑34 (MQ=255) tcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTcc > 1:706973‑M1/57‑100 (MQ=255) tcgaacccctgttaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTcc > 2:1705484‑M1/57‑100 (MQ=255) tcgaacccctgtgaccgccgtgaaagggcggtgtcctgggcctctagacgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTcc > 2:4126619‑M1/57‑100 (MQ=255) gAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagg < 2:2380068‑M1/100‑36 (MQ=255) gAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagg < 1:3754392‑M1/100‑36 (MQ=255) gAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtag < 1:3340865‑M1/99‑35 (MQ=255) tGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcatgatattttcgtgtagggtg < 1:1994802‑M1/100‑39 (MQ=255) cccctgttaccgccgtgaaagggcggtgtcctgggcctctcgccgaaggggACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCtt > 2:3927780‑M1/52‑99 (MQ=255) cTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctt < 1:1202709‑M1/100‑44 (MQ=255) cttccgatctcgaaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctc < 1:3460658‑M1/90‑84 (MQ=255) tACACGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactccc > 2:1463204‑M1/1‑11 (MQ=255) ACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAt > 2:2810698‑M1/1‑100 (MQ=255) ACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAt > 2:406528‑M1/1‑100 (MQ=255) ACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAt < 2:193601‑M1/100‑1 (MQ=255) cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa > 2:2609043‑M1/1‑9 (MQ=255) cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa > 1:1160289‑M1/1‑9 (MQ=255) cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa > 1:530086‑M1/1‑9 (MQ=255) cacGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaa > 2:3316632‑M1/1‑9 (MQ=255) CACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc < 2:3151883‑M1/100‑1 (MQ=255) CACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc > 2:756131‑M1/1‑100 (MQ=255) CACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc < 2:3731202‑M1/100‑1 (MQ=255) CACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc < 1:412353‑M1/100‑1 (MQ=255) CACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATc > 1:1691486‑M1/1‑100 (MQ=255) CACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGATCGAATc < 1:1211967‑M1/100‑1 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgcacggccttattctcttcagcctcactcccaacg > 1:2018925‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcagatcggaag > 2:3460681‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg > 2:3972419‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg < 1:2814807‑M1/100‑94 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg > 1:280734‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg > 1:3239823‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg > 2:642948‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg > 1:1374509‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg < 1:1463198‑M1/100‑94 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg > 1:2476649‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacg > 1:1863427‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaac > 2:1293977‑M1/1‑7 (MQ=255) cGAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcataaatagaaagcgaacggccttattctcttcagcctcactcccaacg > 2:3460844‑M1/1‑7 (MQ=255) naaaattgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgc > 2:4381739‑M1/2‑6 (MQ=255) gAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaccggccttattctcttcagcctcactcccaacgc < 2:491379‑M1/100‑95 (MQ=255) gAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgc < 1:1077548‑M1/100‑95 (MQ=255) gAAAATtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgc > 2:4409822‑M1/1‑6 (MQ=255) aaaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcg < 1:301297‑M1/100‑96 (MQ=255) aaaaTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcg < 1:749466‑M1/100‑96 (MQ=255) aTtgcttatcaggcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacgaccttattctcttcagcctcactcccaacgcgtaa > 1:2317220‑M1/1‑2 (MQ=255) aTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaa < 2:4357006‑M1/100‑99 (MQ=255) aTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaa < 1:1167311‑M1/100‑99 (MQ=255) aTtgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaa > 1:3797409‑M1/1‑2 (MQ=255) ttgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaan < 1:2446338‑M1/100‑100 (MQ=255) ttgcttatcacgcgttgcgtgatattttcgtgtagggtgagctttcattaatagaaagcgaacggccttattctcttcagcctcactcccaacgcgtaaa < 2:3589919‑M1/100‑100 (MQ=255) | GATAGAAAGTGAAAAGCAAGGCGTTTACGCGTTGGGAGTGAGGCTGAAGAGAATAAGGCCGTTCGCTTTCTATTAATGAAAGCTCACCCTACACGAAAAT‑‑‑‑‑ATCACGCAACGCGTGATAAGCAATTTTCGTGTCCCCTTCGTCTAGAGGCCCAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAATCCCC > NC_000913/4168242‑4168435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |