New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 805804 =NA (NA)15 (0.100) 10/164 NT NA noncoding (1/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 805836 = NA (NA)noncoding (33/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 219 total aligned reads displayed.

GAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805705‑805903
                                                                                                   |                                                                                                   
ttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagg                                                                                                     >  1:2374072‑M1/100‑100 (MQ=255)
 tgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGt                                                                                                    <  1:2244909‑M1/2‑1 (MQ=255)
  gcgcGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTc                                                                                                   >  2:4105651/1‑100 (MQ=255)
    gcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCgg                                                                                                 >  1:500748/1‑100 (MQ=255)
     ggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttttctggctttcagattcgatgcgattcgtagg                                                                                                     <  2:4407822‑M1/1‑1 (MQ=255)
      gtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGgat                                                                                               >  1:2468589‑M1/94‑100 (MQ=255)
      gagaTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgat                                                                                               <  2:3968246/100‑1 (MQ=255)
        gaTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgattc                                                                                             <  2:2987410/100‑3 (MQ=255)
         ggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgatttgtagGTCGga                                                                                                <  1:2281759‑M1/6‑1 (MQ=255)
          ttATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcga                                                                                           <  2:2071368/100‑1 (MQ=255)
           tATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgat                                                                                          <  2:3948222/100‑1 (MQ=255)
              cAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCt                                                                                       >  1:1010886/1‑100 (MQ=255)
               aaGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCtt                                                                                      >  2:1589203/1‑100 (MQ=255)
                aGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTg                                                                                     <  2:2043651/100‑1 (MQ=255)
                aGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTg                                                                                     >  2:3521530/1‑100 (MQ=255)
                 ggCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgc                                                                                    <  1:2074499/100‑1 (MQ=255)
                  gCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgcg                                                                                   <  2:577925/100‑1 (MQ=255)
                    gggTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCa                                                                                 >  1:642422/1‑100 (MQ=255)
                     ggTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCAt                                                                                <  2:3671063/100‑1 (MQ=255)
                     caagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCAt                                                                                >  2:681221‑M1/79‑100 (MQ=255)
                       tAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCt                                                                              <  2:1830971/100‑1 (MQ=255)
                         gTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTa                                                                            >  1:3787865/1‑100 (MQ=255)
                           tcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATc                                                                          >  2:3424472‑M1/73‑100 (MQ=255)
                            cgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  2:3782778‑M1/72‑100 (MQ=255)
                            cgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  2:1123‑M1/72‑100 (MQ=255)
                            cgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATAAGATGCTTGCGCATCTTATcc                                                                         >  2:2241962‑M1/72‑100 (MQ=255)
                             gATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCg                                                                        >  2:2953714/1‑100 (MQ=255)
                             gATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCg                                                                        >  1:4004127/1‑100 (MQ=255)
                               ttAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAc                                                                      <  2:3444330/100‑1 (MQ=255)
                               ttAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAc                                                                      <  2:786967/100‑1 (MQ=255)
                               atccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGAc                                                                      >  1:4350409‑M1/69‑100 (MQ=255)
                                tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     <  2:3292862/100‑1 (MQ=255)
                                tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     <  2:646364/100‑1 (MQ=255)
                                  aCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTa                                                                   >  1:4253476/1‑100 (MQ=255)
                                   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  >  1:3133641/1‑100 (MQ=255)
                                    ttCAATAAAACCCGTCACATGTAAAAATCGCAATGTGAAAGTAGGTCGCATTCGGCACTTATTGTCGGATGCTATGCTTGCGAATCTTATCCGACCTACg                                                                 <  1:1301843/100‑1 (MQ=21)
                                    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 >  1:4131716/1‑100 (MQ=255)
                                    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 <  1:1302998/100‑1 (MQ=255)
                                    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 >  1:2088622/1‑100 (MQ=255)
                                      cAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGaa                                                               >  2:270149/1‑100 (MQ=255)
                                       aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                              >  2:2847421/1‑100 (MQ=255)
                                       aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                              >  2:1149934/1‑100 (MQ=255)
                                       aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                              <  2:3732545/100‑1 (MQ=255)
                                        aTAAAAACCGTCAGATGTAAAAAGCGCTATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATc                                                             <  1:2620450/100‑1 (MQ=255)
                                        aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATc                                                             >  1:861570/1‑100 (MQ=255)
                                        aTAAAAACCGGCAGATGTAAACAGCGCCATGTGAATGTAGGGCGCATTCGGCACTTATTGTCGCATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                              <  1:1646951/99‑1 (MQ=25)
                                         tAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCg                                                            <  2:3142553/100‑1 (MQ=255)
                                           aaaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCa                                                          >  2:1922773/1‑100 (MQ=255)
                                            aaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCAt                                                         <  2:2525630/100‑1 (MQ=255)
                                             aaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATc                                                        <  1:651101/100‑1 (MQ=255)
                                             aaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATc                                                        <  1:629017/100‑1 (MQ=255)
                                               ccGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGa                                                      >  2:1066151/1‑100 (MQ=255)
                                                cGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGaa                                                     <  1:609585/100‑1 (MQ=255)
                                                cGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGaa                                                     >  1:1418859/1‑100 (MQ=255)
                                                 gTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGa                                                      >  1:718937/1‑98 (MQ=255)
                                                 gTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAAt                                                    <  2:2267425/100‑1 (MQ=255)
                                                   cAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCt                                                  >  2:562876/1‑100 (MQ=255)
                                                    aGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTg                                                 >  2:3347518/1‑100 (MQ=255)
                                                    aGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTCATCCGACCTACGAATCGCATCGAATCTg                                                 >  1:3720896/1‑100 (MQ=255)
                                                      aTGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTa                                               >  2:4364925/1‑100 (MQ=255)
                                                      aTGTAAAAAGCGCCATGTGAATGTAGGTCGCATTAGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTTTa                                               >  2:4291247/1‑100 (MQ=255)
                                                       tGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAg                                              >  2:2209986/1‑100 (MQ=255)
                                                        gTAAAAAGCGCAATGTGACTGTAGTTCGCATTCGGCACTTATTGTCGGATGCGATGTTTGCGCATATTACCCGACCTACGAatcgaatcgatatcgtagg                                             >  1:1168787/1‑91 (MQ=18)
                                                        cgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAgg                                             >  2:1725046‑M1/44‑100 (MQ=255)
                                                          aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGcc                                           >  2:1562771/1‑100 (MQ=255)
                                                           aaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCa                                          <  1:1808087/100‑1 (MQ=255)
                                                            aaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAg                                         <  2:91831/100‑1 (MQ=255)
                                                             aaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGa                                        >  2:2990562/1‑100 (MQ=255)
                                                              aGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGAt                                       >  2:2019022/1‑100 (MQ=255)
                                                               gcgcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGAtn                                      <  1:1103057/100‑2 (MQ=255)
                                                                  ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGCCCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                   >  2:1092843/1‑100 (MQ=255)
                                                                  ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                   >  1:2213697/1‑100 (MQ=255)
                                                                  ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                   <  2:3082294/100‑1 (MQ=255)
                                                                  ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                   <  2:1010888/100‑1 (MQ=255)
                                                                     tgtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAt                                >  2:1973451/1‑100 (MQ=255)
                                                                      gtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAtt                               <  1:1023853/100‑1 (MQ=255)
                                                                      gtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAt                                <  1:1797264/99‑1 (MQ=255)
                                                                       tgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAttt                              >  2:2742385/1‑100 (MQ=255)
                                                                           tGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                          <  1:379748/100‑1 (MQ=255)
                                                                           tGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                          <  1:3328120/100‑1 (MQ=255)
                                                                            gTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgca                         <  2:3699387/100‑1 (MQ=255)
                                                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                        <  1:15018/100‑1 (MQ=255)
                                                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                        <  2:3541787/100‑1 (MQ=255)
                                                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                        <  1:2002456/100‑1 (MQ=255)
                                                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                        <  1:2986890/100‑1 (MQ=255)
                                                                                gTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAACCTGTAGCCCAGTTAAGGCATTTTCgc                          >  1:31943/1‑95 (MQ=255)
                                                                                    cATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGTATTTTCGCAGCATCCgg                 >  2:2163819/1‑100 (MQ=255)
                                                                                     aTTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGc                <  1:2019015/100‑1 (MQ=255)
                                                                                     aTTCGGAACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGc                <  2:1611323/100‑1 (MQ=255)
                                                                                          gCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTa           <  2:1500455/100‑1 (MQ=255)
                                                                                             cTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTAt          >  1:3537662/1‑98 (MQ=255)
                                                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      <  2:942737/100‑1 (MQ=255)
                                                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      <  2:417285/100‑1 (MQ=255)
                                                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      >  2:1291349/1‑100 (MQ=255)
                                                                                                aTTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCg     <  1:2990544/100‑1 (MQ=255)
                                                                                                aTTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCg     <  1:3860283/100‑1 (MQ=255)
                                                                                                 ttGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATGCGGCACTTATTGTCgg    >  1:2581121/1‑100 (MQ=255)
                                                                                                  tGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGga   <  2:824603/100‑1 (MQ=255)
                                                                                                  tGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGga   <  2:3053142/100‑1 (MQ=255)
                                                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat  <  2:2433643‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805705‑805903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.