BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	805804 =	NA (NA)	15 (0.100)	10/164	NT	NA	noncoding (1/178 nt)	REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
*	?	NC_000913	805836 =	NA (NA)	15 (0.100)	10/164	NT	NA	noncoding (33/178 nt)	REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 219 total aligned reads displayed.

TAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAA  >  NC_000913/805737‑805934

tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                                                    <  2:3292862/100‑1 (MQ=255)

tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                                                    <  2:646364/100‑1 (MQ=255)

  aCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTa                                                                                                  <  1:200512/100‑1 (MQ=255)

  aCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTAAATGTAGCTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTa                                                                                                  >  1:1337850/1‑100 (MQ=255)

   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                                                 >  2:2476598/1‑100 (MQ=255)

    ttCAATAAAAACCGTCAGATGTAAAAAGCTCCATGTGAATGTCGGTCGCATTCGGCACTTATTGTCAGATGCGCTGCTTGCGCATCTTATCCGACCTACg                                                                                                <  1:1301891/100‑1 (MQ=37)

    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                                                >  1:1288370/1‑100 (MQ=255)

    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                                                >  1:2088622/1‑100 (MQ=255)

    tccAATAAAAACCATCAGATGTAAAAAGCGCCATGTGAATGTCGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                                                >  2:2987821/3‑100 (MQ=255)

     tCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGa                                                                                               >  2:1931835/1‑100 (MQ=255)

      cAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGaa                                                                                              >  2:270149/1‑100 (MQ=255)

       aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                                                             <  2:3732545/100‑1 (MQ=255)

       aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                                                             >  2:2847421/1‑100 (MQ=255)

        aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATc                                                                                            >  1:861570/1‑100 (MQ=255)

         tAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCg                                                                                           <  2:3142553/100‑1 (MQ=255)

         tAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCg                                                                                           <  2:3009948/100‑1 (MQ=255)

            aaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCAt                                                                                        <  2:2525630/100‑1 (MQ=255)

             aaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATc                                                                                       <  1:651101/100‑1 (MQ=255)

              aCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCg                                                                                      <  2:2253627/100‑1 (MQ=255)

               ccGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGa                                                                                     >  1:2398064/1‑100 (MQ=255)

                cGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGaa                                                                                    <  1:609585/100‑1 (MQ=255)

                 gTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGa                                                                                     >  1:718937/1‑98 (MQ=255)

                 gTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAAt                                                                                   <  2:2267425/100‑1 (MQ=255)

                   cAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCt                                                                                 >  2:3118813/1‑100 (MQ=255)

                   cAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCt                                                                                 >  2:3490366/1‑100 (MQ=255)

                   cAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCt                                                                                 >  2:562876/1‑100 (MQ=255)

                    aGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTg                                                                                >  2:3347518/1‑100 (MQ=255)

                    aGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTg                                                                                <  2:1003854/100‑1 (MQ=255)

                    aGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTCATCCGACCTACGAATCGCATCGAATCTg                                                                                >  1:3720896/1‑100 (MQ=255)

                      aTGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTa                                                                              >  2:2537678/1‑100 (MQ=255)

                      aTGTAAAAAGCGCCATGTGAATGTAGGTCGCATTAGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTTTa                                                                              >  2:4291247/1‑100 (MQ=255)

                        gTAAAAAGCGCCATGTGAATGTAGGTCGCTTTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAgg                                                                            <  1:3795404/100‑1 (MQ=255)

                        gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAgg                                                                            <  2:1279368/100‑1 (MQ=255)

                        gTAAAAAGCGCAATGTGACTGTAGTTCGCATTCGGCACTTATTGTCGGATGCGATGTTTGCGCATATTACCCGACCTACGAatcgaatcgatatcgtagg                                                                            >  1:1168787/1‑91 (MQ=18)

                        cgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAgg                                                                            >  2:1725046‑M1/44‑100 (MQ=255)

                         tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGc                                                                           <  2:11475/100‑1 (MQ=255)

                          aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGcc                                                                          >  2:1562771/1‑100 (MQ=255)

                           aaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCa                                                                         >  2:2010119/1‑100 (MQ=255)

                           aaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCa                                                                         <  1:1808087/100‑1 (MQ=255)

                            aaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAg                                                                        <  2:91831/100‑1 (MQ=255)

                              aGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACTTCCGAATCGCACCGAATCTGTAGGCCAGa                                                                       >  1:2772832/1‑99 (MQ=255)

                              aGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGAt                                                                      >  2:2019136/1‑100 (MQ=255)

                               gcgcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGAtn                                                                     <  1:1103057/100‑2 (MQ=255)

                                 gcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAg                                                                   >  1:2661779/1‑100 (MQ=255)

                                  ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGCCCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                                                  >  2:1092843/1‑100 (MQ=255)

                                  ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                                                  >  2:1018275/1‑100 (MQ=255)

                                  ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                                                  >  1:2213697/1‑100 (MQ=255)

                                       tgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAttt                                                             >  1:4061617/1‑100 (MQ=255)

                                       tgAATGTAGGTCGCATTCGCCACTTATCGTCGGATGCGATCCTTGCACATCTTATCCGACCTACGAATCTCATCCTACCTGTAGGCCAGATAAGGCAtt                                                              <  1:1641792/99‑1 (MQ=18)

                                           tGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                                                         >  2:1122803/1‑100 (MQ=255)

                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                                                       <  2:3541787/100‑1 (MQ=255)

                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                                                       <  1:2986890/100‑1 (MQ=255)

                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                                                       <  2:3693030/100‑1 (MQ=255)

                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                                                       >  2:4337772/1‑100 (MQ=255)

                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                                                       <  1:15018/100‑1 (MQ=255)

                                              aGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcagc                                                      >  2:2217210/1‑100 (MQ=255)

                                               ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCGAGATAAGGCATTTTGgc                                                         >  1:2263792/1‑96 (MQ=255)

                                                gattcgatgcgattcgtaggtcggataagatgcgcaagcatcgcatccaacCTACGAATTGCATCGAATATCTCGGCCAGATAAGACATATTCGCAGCAt                                                    >  1:1832893‑M2/52‑100 (MQ=255)

                                                gTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAACCTGTAGCCCAGTTAAGGCATTTTCgc                                                         >  1:31943/1‑95 (MQ=255)

                                                  cGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATcc                                                  >  2:3880870/1‑100 (MQ=255)

                                                     aTTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGc                                               <  1:2019129/100‑1 (MQ=255)

                                                       tCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCAc                                             <  1:3819938/100‑1 (MQ=255)

                                                        cGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACt                                            <  2:1607414/100‑1 (MQ=255)

                                                        cGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACt                                            <  2:794046/100‑1 (MQ=255)

                                                         ggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACtt                                           <  1:1959766/100‑1 (MQ=255)

                                                          gCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTa                                          <  2:1500455/100‑1 (MQ=255)

                                                           cACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTAt                                         >  2:3266968/1‑100 (MQ=255)

                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc                                     <  2:417285/100‑1 (MQ=255)

                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc                                     >  2:2912235/1‑100 (MQ=255)

                                                               gtaggtcggataagatgcgcaagcatcgaatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc                                     >  2:2714653‑M2/37‑100 (MQ=255)

                                                                aTTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCg                                    <  1:2990544/100‑1 (MQ=255)

                                                                 ttGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATGCGGCACTTATTGTCgg                                   >  1:2581121/1‑100 (MQ=255)

                                                                  tGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGga                                  <  2:3053142/100‑1 (MQ=255)

                                                                   gtcggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat                                 >  1:349852‑M2/33‑100 (MQ=255)

                                                                   gTCGGATGCGATGCTGGTGCATCTTATCCGACCTACGAATCGCATCGAATCTCTATGCCAGATAATGTATTTTCGCATTATACGGCACATATTGtttgat                                 <  1:1021610/100‑6 (MQ=18)

                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAATGCATTTTCCCAGCATCCGGCACTTATTGtcggct                                 <  1:2317215‑M1/100‑3 (MQ=255)

                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat                                 <  2:2433643‑M1/100‑1 (MQ=255)

                                                                     CGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgc                               <  2:2072893‑M1/100‑1 (MQ=255)

                                                                     CGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgc                               >  2:2205520‑M1/1‑100 (MQ=255)

                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcg                              >  2:4042154‑M2/30‑100 (MQ=255)

                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTAGCAGCATACGGCACTTATTGTCGgatgc                               >  1:414064‑M2/30‑99 (MQ=255)

                                                                      GGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCAATTATTGTCGgatgc                               <  1:3697893‑M1/99‑1 (MQ=255)

                                                                       gataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcga                             >  2:3424472‑M2/29‑100 (MQ=255)

                                                                       GATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcga                             >  1:2517883‑M1/1‑100 (MQ=255)

                                                                        ATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcgat                            >  2:1218558‑M1/1‑100 (MQ=255)

                                                                          aagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcgatgc                          <  1:1725039‑M2/75‑1 (MQ=255)

                                                                           cgatgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCt                         <  1:4337740/100‑1 (MQ=255)

                                                                            gatgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCtt                        >  2:867829/1‑100 (MQ=255)

                                                                              tgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTgc                      >  2:2170060/1‑100 (MQ=255)

                                                                               gcgcaagcATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTgcg                     <  1:2241952/94‑1 (MQ=255)

                                                                                 ttGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCa                   <  2:1875420/100‑1 (MQ=255)

                                                                                   gcgcATCTTATCCTACCTACTAATCGCATCGAAGCTGTAGGCCTGATGAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTgcgc                    <  1:465130/97‑1 (MQ=37)

                                                                                   gcgcATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATc                 >  2:4080788/1‑100 (MQ=255)

                                                                                   gcgcATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATc                 >  2:733052/1‑100 (MQ=255)

                                                                                    cgcATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCt                <  2:163798/100‑1 (MQ=255)

                                                                                        tCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATc            >  2:3706728/1‑100 (MQ=255)

                                                                                         cTTATCCGGCCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc           <  2:3787891/100‑1 (MQ=255)

                                                                                         cTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc           <  2:763628/100‑1 (MQ=255)

                                                                                             tacgacCTACGAATCGCATCGAATCTGTAGGGCGGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc       <  1:635969‑M2/94‑1 (MQ=255)

                                                                                                  cCTACGAATCGCATCGAATCTGAAAGCCAGAAAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc       <  2:4407822‑M2/94‑1 (MQ=255)

TAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAA  >  NC_000913/805737‑805934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.