BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4621981	175 (1.110)	11 (0.080)	7/166	NT	6.2%	coding (213/1332 nt)	yjjJ	putative protein kinase
*	?	NC_000913	= 4622003	168 (1.150)	11 (0.080)	7/166	NT	6.2%	coding (235/1332 nt)	yjjJ	putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 205 total aligned reads displayed.

CGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGAC  >  NC_000913/4621904‑4622102

 gggCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAt                                                                                                    <  1:2551597‑M2/100‑2 (MQ=255)

  ggCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtc                                                                                                   <  2:4302251‑M2/100‑3 (MQ=255)

      aCGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggt                                                                                               >  1:936885‑M2/1‑94 (MQ=255)

        gcgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggt                                                                                               >  2:1724358‑M2/1‑92 (MQ=255)

        gcgATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTtg                                                                                             >  2:2250825/1‑100 (MQ=255)

          gATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTtgtg                                                                                           <  2:3790743/100‑1 (MQ=255)

           atatGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTtgtg                                                                                           >  2:2028877/1‑99 (MQ=255)

             atGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTg                                                                                        >  2:1072823/1‑100 (MQ=255)

              tgtaCTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTgg                                                                                       >  2:717386/4‑100 (MQ=255)

               gCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGc                                                                                      >  1:1036502/1‑100 (MQ=255)

               gCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGc                                                                                      <  1:1181601/100‑1 (MQ=255)

               gCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGc                                                                                      <  1:1446520/100‑1 (MQ=255)

               gCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGc                                                                                      >  2:679046/1‑100 (MQ=255)

                cACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGcc                                                                                     <  2:4359275/100‑1 (MQ=255)

                cACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGcc                                                                                     <  2:2161877/100‑1 (MQ=255)

                cACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGCGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGcc                                                                                     >  1:1493586/1‑100 (MQ=255)

                  ctgctgCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGc                                                                                   >  2:210133/1‑100 (MQ=255)

                   tgctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCa                                                                                  <  2:3281707/100‑1 (MQ=255)

                    gctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAg                                                                                 >  2:1647495/1‑100 (MQ=255)

                    gctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTCGCGGGTGCACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCg                                                                                    <  1:2056073/97‑1 (MQ=255)

                     ctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAgg                                                                                <  2:2921475/100‑1 (MQ=255)

                     ctgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAg                                                                                 <  1:966266/99‑1 (MQ=255)

                      tgcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAggg                                                                               <  1:81203/100‑1 (MQ=255)

                       gcGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGa                                                                              <  1:2920471/100‑1 (MQ=255)

                         gTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAg                                                                            <  2:1913258/100‑1 (MQ=255)

                         gTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAg                                                                            <  2:1442524/100‑1 (MQ=255)

                         gTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAg                                                                            >  1:2094910/1‑100 (MQ=255)

                            cTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTg                                                                         <  1:3484743/100‑1 (MQ=255)

                            cTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTg                                                                         >  1:3782337/1‑100 (MQ=255)

                               aTCGCGGAATTGAGCGTATTCCCGTTTGGCGGGGGGGCGATACGGGAAAGGCGCATAACTTCGCCGACATTCGGTTGTGCTGGCCGCGGGGACGTTGt                                                                        >  1:3743810/1‑98 (MQ=255)

                               aTCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCt                                                                      <  2:3517174/100‑1 (MQ=255)

                                tCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTg                                                                     <  2:1182228/100‑1 (MQ=255)

                                tCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTg                                                                     >  2:2814767/1‑100 (MQ=255)

                                 ngcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTgg                                                                    >  1:1083897/2‑100 (MQ=255)

                                 cgcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTgg                                                                    <  1:4068565/100‑1 (MQ=255)

                                 cgcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTgg                                                                    <  1:419051/100‑1 (MQ=255)

                                  gcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGt                                                                   <  2:2484754/100‑1 (MQ=255)

                                  gcgGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGt                                                                   >  2:3657327/1‑100 (MQ=255)

                                    ggAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTaa                                                                 >  2:1774851/1‑100 (MQ=255)

                                       aTTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAg                                                              >  2:535366/1‑100 (MQ=255)

                                         tGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTgagatcggaa                                                            >  2:856946/1‑91 (MQ=255)

                                         tGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgc                                                            >  2:3341845/1‑100 (MQ=255)

                                           aGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGgcgc                                                          <  1:3310852/100‑1 (MQ=255)

                                           aGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCCGGTAACAGgcgc                                                          >  1:1984319/1‑100 (MQ=255)

                                            gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCa                                                         <  1:1774844/100‑1 (MQ=255)

                                            gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCa                                                         >  2:30686/1‑100 (MQ=255)

                                            gCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCa                                                         >  1:2592163/1‑100 (MQ=255)

                                              gTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGa                                                       >  2:2305143/1‑100 (MQ=255)

                                               tATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGAt                                                      >  2:3592619/1‑100 (MQ=255)

                                               tATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGAt                                                      >  1:3608353/1‑100 (MQ=255)

                                                  tCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGc                                                   <  1:142365/100‑1 (MQ=255)

                                                  tCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGc                                                   <  2:1894698/100‑1 (MQ=255)

                                                   cccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcg                                                  <  1:4086133/100‑1 (MQ=255)

                                                    ccGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGcga                                                 >  1:2791827/1‑100 (MQ=255)

                                                         tGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAAc                                            <  1:193674/100‑1 (MQ=255)

                                                         tGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAAc                                            >  1:4009084/1‑100 (MQ=255)

                                                         tGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGAGCAGATGGCGACGaa                                             >  2:4019867/1‑99 (MQ=255)

                                                            cGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGt                                         <  1:3515279/100‑1 (MQ=255)

                                                              ggTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGt                                         <  1:839303/98‑1 (MQ=255)

                                                               gTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGt                                      <  2:3919027/100‑1 (MQ=255)

                                                               gTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGt                                      <  2:3731265/100‑1 (MQ=255)

                                                                tGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGtt                                     <  1:789962/100‑1 (MQ=255)

                                                                  gACGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcata                                   <  1:42158‑M2/100‑67 (MQ=255)

                                                                  gACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTg                                   >  2:2188708/1‑100 (MQ=255)

                                                                   aCGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatat                                  <  2:4273641‑M2/100‑68 (MQ=255)

                                                                    cGATACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatc                                 <  1:1359107‑M2/100‑69 (MQ=255)

                                                                    cGATACCGGAAAGGCGCATAAATTCGCCGACAGCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGAt                                 <  1:2147717/100‑1 (MQ=255)

                                                                     gttACGGGAAAGGCGCATAAATTCGCCGACATCCGGTGGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATg                                <  1:3835039/98‑1 (MQ=255)

                                                                     gATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATg                                <  1:3952525/100‑1 (MQ=255)

                                                                      aTACCGGAAAGGCGCATAAATTCGCCGACAtccggtatcgtccacccgccagacgggaatacgctcaattccgcgataaggacgcagcagtgcatatcgc                               <  1:1688697‑M2/100‑71 (MQ=255)

                                                                       tACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGt                              >  2:1523566/1‑100 (MQ=255)

                                                                       tACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGt                              >  1:3709726/1‑100 (MQ=255)

                                                                       tACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGt                              <  2:2685919/100‑1 (MQ=255)

                                                                       tACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGt                              >  2:2714106/1‑100 (MQ=255)

                                                                       gacgggAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATg                                <  2:312056/94‑1 (MQ=255)

                                                                        aCCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGtt                             <  2:3249431/100‑1 (MQ=255)

                                                                         ccGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGttt                            >  2:781850/1‑100 (MQ=255)

                                                                           ggAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGc                          >  1:2274712/1‑100 (MQ=255)

                                                                             aaaGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGccc                        <  2:578186/100‑1 (MQ=255)

                                                                             aaaGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCCGGTAACAGGCGCGGATGGCGACGAACAGGGGTTTGATGGTTGGcgc                        >  1:4316321/1‑98 (MQ=255)

                                                                                 gcgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGt                    <  1:1457379/100‑1 (MQ=255)

                                                                                 gcgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGt                    <  1:1647488/100‑1 (MQ=255)

                                                                                  cgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTa                   <  1:533714/100‑1 (MQ=255)

                                                                                  cgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTa                   >  2:3936187/1‑100 (MQ=255)

                                                                                  cgcATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTa                   <  1:7194/100‑1 (MQ=255)

                                                                                      tAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTg               <  2:160745/100‑1 (MQ=255)

                                                                                        aaTTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTTGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGAc             <  1:2672354/100‑1 (MQ=255)

                                                                                        aaTTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGAc             >  1:2812465/1‑100 (MQ=255)

                                                                                        aaTTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGAc             >  1:581690/1‑100 (MQ=255)

                                                                                         aTTCGCCTACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGGAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGAcc            <  1:857863/100‑1 (MQ=255)

                                                                                          ttCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCg           >  1:305279/1‑100 (MQ=255)

                                                                                           tCGCCGACACCCAGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTCACTGACGCTGACGGCGACGAACAGTGGTTTCATGGTTTGCCCTAGTATTTGACCGa          <  2:4395144/100‑1 (MQ=255)

                                                                                            cGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGAt         >  1:3388821/1‑100 (MQ=255)

                                                                                            cGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCGGGTATTTGACCGAt         >  1:3008395/1‑100 (MQ=255)

                                                                                             gCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGAtc        >  2:1361690/1‑100 (MQ=255)

                                                                                             gCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGAtc        <  2:3814804/100‑1 (MQ=255)

                                                                                              ccGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGagatcgga       >  1:599771/1‑93 (MQ=255)

                                                                                              ccGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGAtct       >  2:2440914/1‑100 (MQ=255)

                                                                                                 aCATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCTTGGTATTTGACCGATCTCCg    <  2:4149869/100‑1 (MQ=255)

                                                                                                   aTCCGGTTGTGCTGGCCGCAGGGAAGTTGTCAGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGAc  >  2:1049106/1‑100 (MQ=255)

CGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGCGGGTGGACGATACCGGAAAGGCGCATAAATTCGCCGACATCCGGTTGTGCTGGCCGCAGGGAAGTTGTCTGGTAACAGGCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGAC  >  NC_000913/4621904‑4622102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.