| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 39200 | NA (NA) | 12 (0.080) | 4/164 | NT | NA | noncoding (50/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 39232 | NA (NA) | noncoding (82/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 248 total aligned reads displayed.
TTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAGATCA > NC_000913/39133‑39331 | tttATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGC > 1:281127‑M2/1‑100 (MQ=255) ttATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCa > 2:2064000/1‑100 (MQ=255) tGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcg > 1:216954/1‑100 (MQ=255) gTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcgc < 1:2488284/100‑1 (MQ=255) tccgtgcgcTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACg < 1:2785194/92‑1 (MQ=255) cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc < 2:449214/100‑1 (MQ=255) cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc > 2:40132/1‑100 (MQ=255) cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc > 2:3040012/1‑100 (MQ=255) cATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGAc < 1:1608231/100‑1 (MQ=255) tGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACtt > 2:3054934/1‑100 (MQ=255) cTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGc > 2:2166612/1‑100 (MQ=255) aggccggataaagcgtttacgccgcatccggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGc > 1:1057559‑M2/33‑100 (MQ=255) ggccggataaagcgtttacgccgcatccggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCg > 2:3919036‑M2/32‑100 (MQ=255) gacggataaagcgtttacgccgcatccggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg > 2:2995089‑M2/31‑100 (MQ=255) GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg > 2:120459‑M1/1‑100 (MQ=255) GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg > 2:2467305‑M1/1‑100 (MQ=255) GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg < 2:963091‑M1/100‑1 (MQ=255) ccggataaagcgtttacgccgcatccggcCTACATTCGTGCTCCCGTACGCCGGATAAGACGCATCAGCGTCGCATCAGGCATCGCACGGGCTTAGCGGt > 1:1132577‑M2/30‑100 (MQ=255) CCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGt > 1:1837314‑M1/1‑100 (MQ=255) CCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGt > 1:4235894‑M1/1‑100 (MQ=255) GGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTagcgggac < 2:3963403‑M1/100‑4 (MQ=255) ATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTg > 2:630370‑M1/1‑100 (MQ=255) TGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGc < 2:2307754‑M1/100‑1 (MQ=255) gcggcgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCt < 2:3412564/100‑1 (MQ=255) ggcgTAAGCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTc < 1:78276/100‑1 (MQ=255) cgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAg < 2:738496/100‑1 (MQ=255) cgTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAg > 2:4365832/1‑100 (MQ=255) cgTAAACGCTTTATCCGGCCTAAATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAg > 1:1020302/1‑100 (MQ=255) gTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAAACGCATCAGCGTCGCATCATGCACCGCACGGACTTAGCGGTATTGCTTCa > 1:4114052/1‑98 (MQ=255) tAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCa > 2:2657737/1‑100 (MQ=255) aaaCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCAc > 1:3789304/1‑100 (MQ=255) aaCGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCAcc > 1:1378029/1‑100 (MQ=255) cTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCAc < 2:3537802/100‑1 (MQ=255) tATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGAc < 2:2795554/100‑1 (MQ=255) atccggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGAcc > 1:722159‑M2/8‑100 (MQ=255) ccggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCa > 2:3934235‑M2/6‑100 (MQ=255) cggcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAg < 2:182323‑M2/96‑1 (MQ=255) gcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCg < 2:1622477‑M2/98‑1 (MQ=255) gcCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCg > 2:1345645‑M2/3‑100 (MQ=255) cCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGt < 2:2782864‑M2/99‑1 (MQ=255) cTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTc > 1:1165934/1‑100 (MQ=255) cTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTc > 2:3250246/1‑100 (MQ=255) tACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCa > 2:1858356/1‑100 (MQ=255) tACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCa < 2:1113259/100‑1 (MQ=255) cATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAgg > 2:3635351/1‑100 (MQ=255) cATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAgg > 1:473059/1‑100 (MQ=255) ttCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGAt > 1:3080887/1‑100 (MQ=255) gTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTg < 2:4152500/100‑1 (MQ=255) ttcTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCACGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGc < 1:3630394/98‑1 (MQ=255) tGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGc < 1:2775784/100‑1 (MQ=255) tGCTCCCGTAGGCCTGATAAGAAGCATCAGCGACGCATCAGGCAGCGCACAGACTTAGCGGTATTGCTTCAGCACCGCAAGACCCAGCGTCAGGATCTGc > 1:1718101/1‑100 (MQ=38) gCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCa < 2:1454856/100‑1 (MQ=255) gCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCa > 2:4100268/1‑100 (MQ=255) cTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCa > 1:3957812/1‑99 (MQ=255) tCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCAtt > 2:2960435/1‑100 (MQ=255) cccGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgct < 2:2670649‑M2/100‑62 (MQ=255) cccGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCAttt > 2:286898/1‑100 (MQ=255) cGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCg < 1:1262981/100‑1 (MQ=255) gTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGt < 2:578817/100‑1 (MQ=255) tAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacat < 1:1942410‑M2/100‑66 (MQ=255) aGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTGGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCa < 1:4213616/100‑1 (MQ=255) aGGCCTGATAAGACGCAGCAGCGTTGCATCAGGCAGCGCACGGACTTAGCGGTATTGCCTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCa < 1:2413063/100‑1 (MQ=255) ggCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAg < 1:3001527/100‑1 (MQ=255) ggCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAg < 1:982582/100‑1 (MQ=255) ggCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAg < 2:1546492/100‑1 (MQ=255) gCCTGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaa < 2:224153‑M2/100‑69 (MQ=255) gCCTGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataa < 2:779599‑M2/99‑68 (MQ=255) gCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGa > 2:4123977/1‑100 (MQ=255) gCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGa > 2:4171499/1‑100 (MQ=255) ccTGATAAGACGCATCAGCGTCGCATCAGGCctacgggagcacgaatgtaggccggataaagagtttacgccgcatccggcagtcatgcgctacataaat < 1:2672070‑M2/100‑70 (MQ=255) ccTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGAt > 2:3675060/1‑100 (MQ=255) gATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATccc > 1:768990/1‑100 (MQ=255) gATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGAGGTATTGCTTCAGCACAGCACGAACAAGCGTCAGGATCTGCATTTCGTCAGAt > 1:3287236/1‑97 (MQ=39) aGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCgg < 1:4171370/100‑1 (MQ=255) aGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCgg < 2:2433755/100‑1 (MQ=255) cGCATCAGCGTCGCATCAGACAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGgaga > 1:499443/1‑100 (MQ=255) atacgCGTCGCATCACGCAGCCCACGGACGTAGCCGCATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCCGATCCCCCGGAGAcgc < 1:2630749/96‑1 (MQ=255) aTCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACAGCACGACCCCGCGTCAGGATCTGCATTTCGTCAGATACCCCGGAGAcg > 2:3297611/1‑99 (MQ=255) cAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCgg < 1:582505/100‑1 (MQ=255) gCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTc > 1:354330/1‑100 (MQ=255) gTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTa < 1:224783/100‑1 (MQ=255) cGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTaca < 1:3376505/100‑1 (MQ=255) cGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTaca < 1:3790751/100‑1 (MQ=255) cGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTaca > 2:217331/1‑100 (MQ=255) cATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACg < 2:316050/100‑1 (MQ=255) aTCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatca < 2:1880329‑M2/100‑94 (MQ=255) aTCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGc < 2:4225743/100‑1 (MQ=255) tCAGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcat < 2:3773242‑M2/100‑95 (MQ=255) tCAGCCAGCGCACGGACTTAGCGCTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTTGTCAGTTCCGCGGGCGCCGCGATCTACACGCa < 1:3899760/100‑1 (MQ=255) aGGCctacgggagcacgaatgtaggccggataaagcgtttacgcggcatccggcagtaatgcgcgacataaatttttcaagagcaactcagggatcatct < 1:1393546‑M2/100‑97 (MQ=255) aGGCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatct > 1:370490‑M2/1‑4 (MQ=255) aGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAGa > 1:1324096/1‑100 (MQ=255) ggCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatcta < 1:3225022‑M2/100‑98 (MQ=255) ggCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAGAt > 2:3503877/1‑100 (MQ=255) gCctacgggagcacgaatgtaggccggataaagtgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatctac < 1:1785954‑M2/100‑99 (MQ=255) gCctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggaagtcatgcgctacataaatttttcaggagcaaataatggatcatctac < 2:1976842‑M2/100‑99 (MQ=255) cctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatctacc > 2:1777366‑M2/1‑1 (MQ=255) cctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatctacc > 1:3537777‑M2/1‑1 (MQ=255) cctacgggagcacgaatgtaggccggataaagcgtttacgccgcatccggcagtcatgcgctacataaatttttcaggagcaaataatggatcatctacc > 1:1321568‑M2/1‑1 (MQ=255) cAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAGATCa > 2:3857907/1‑100 (MQ=255) | TTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGGTATTGCTTCAGCACCGCACGACCCAGCGTCAGGATCTGCATTTCGTCAGATCCCCCGGAGACGCGGTCTACACGCAGATCA > NC_000913/39133‑39331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |