New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1040547 =NA (NA)15 (0.110) 8/158 NT NA noncoding (5/36 nt) REP89 (repetitive extragenic palindromic) element; contains 1 REP sequences REP89 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 1040579 = NA (NA)intergenic (+42/‑38) cbdX/appA putative cytochrome bd‑II oxidase subunit/phosphoanhydride phosphorylase

Only 100 of 205 total aligned reads displayed.

GATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATT  >  NC_000913/1040480‑1040678
                                                                                                   |                                                                                                   
gATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGca                                                                                                     <  2:1864945/100‑1 (MQ=255)
  tgtgTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGcaat                                                                                                   >  2:3491396/1‑100 (MQ=255)
   gtgtTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGcaatc                                                                                                  >  2:1446316/1‑100 (MQ=255)
     gtTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGcaatcaa                                                                                                >  2:1047984/1‑100 (MQ=255)
      ttCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGcaatcaat                                                                                               <  2:3697169/100‑1 (MQ=255)
        cGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCaataa                                                                                             >  2:4222334/1‑100 (MQ=255)
        cGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCaataa                                                                                             >  1:2154139/1‑100 (MQ=255)
          ctctCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATg                                                                                           <  2:1357742/100‑1 (MQ=255)
           tctcCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGt                                                                                          >  1:1882531/1‑100 (MQ=255)
            ctcCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTc                                                                                         >  1:1175573/1‑100 (MQ=255)
                 cccTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGata                                                                                    >  2:4001177/1‑100 (MQ=255)
                 cccTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGata                                                                                    >  2:1203564/1‑100 (MQ=255)
                 cccTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGata                                                                                    >  1:2064220/1‑100 (MQ=255)
                   cTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATg                                                                                  >  2:961820/1‑100 (MQ=255)
                   cTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATg                                                                                  <  2:902571/100‑1 (MQ=255)
                    ttGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGa                                                                                 <  1:961818/100‑1 (MQ=255)
                       tgtTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGaaaa                                                                              >  1:469499/1‑100 (MQ=255)
                         ttGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGc                                                                            <  2:3303590/100‑1 (MQ=255)
                          tGGTATGGCTGGTCCCGCGTCTGAAAAGTTAACGAACGAAGGCCTGATGCGGCGCAATAGCATCGCATCAGGCAACCAATAATGTCAGATATGAAAAGCg                                                                           <  1:241283/100‑1 (MQ=255)
                          tGGTATGGCTCGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCg                                                                           <  1:2898744/100‑1 (MQ=255)
                           ggTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCgg                                                                          >  1:3935252/1‑100 (MQ=255)
                               tGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAAc                                                                      <  1:2208447/100‑1 (MQ=255)
                               tGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAAc                                                                      <  2:1642106/100‑1 (MQ=255)
                                ngCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACa                                                                     >  1:1344535/2‑100 (MQ=255)
                                gtcTGGACCCGCGTCTGAAAAGTTAACGGACGTTGGTCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAAc                                                                      <  2:4202819/97‑1 (MQ=255)
                                ggCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACa                                                                     >  2:2773136/1‑100 (MQ=255)
                                 gCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACat                                                                    <  2:3618297/100‑1 (MQ=255)
                                  cTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACata                                                                   >  1:2920865/1‑100 (MQ=255)
                                    gggcccGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATc                                                                 <  1:3536118/97‑1 (MQ=255)
                                    ggACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATc                                                                 <  2:3013977/100‑1 (MQ=255)
                                     ttccgcttttcatatctgacattattgattgcctgatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCg                                                                >  2:3930298‑M2/63‑100 (MQ=255)
                                      aCCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGa                                                               >  1:1847550/1‑100 (MQ=255)
                                       cccGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGa                                                               <  2:181785/99‑1 (MQ=255)
                                        ccGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATg                                                             >  2:2258877/1‑100 (MQ=255)
                                         cgcgTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGa                                                            >  1:4028447/1‑100 (MQ=255)
                                         cgcgTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGa                                                            <  1:93460/100‑1 (MQ=255)
                                              cTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGGAAAGCGGAAACATATCGATGAAAGCg                                                       <  2:2683769/100‑1 (MQ=255)
                                               tGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGACAAGCGGAAACATATCGATGAAAg                                                         >  1:4161083/1‑97 (MQ=255)
                                                gAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAATATATCGATGAAAGCGAt                                                     >  1:3179353/1‑100 (MQ=255)
                                                gAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGa                                                      <  1:1232647/99‑1 (MQ=255)
                                                gAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGAt                                                     >  2:2607408/1‑100 (MQ=255)
                                                 aaaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATTGATGAAAGCGaac                                                    >  1:3759974/1‑98 (MQ=255)
                                                 aaaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATc                                                    >  2:3193877/1‑100 (MQ=255)
                                                 aaaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATc                                                    <  2:2955679/100‑1 (MQ=255)
                                                 aaaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATc                                                    >  2:1275291/1‑100 (MQ=255)
                                                 aaaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATc                                                    <  1:809201/100‑1 (MQ=255)
                                                  aaaGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCt                                                   >  2:85844/1‑100 (MQ=255)
                                                    aGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTa                                                 >  2:3030969/1‑100 (MQ=255)
                                                    aGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTa                                                 >  2:1627253/1‑100 (MQ=255)
                                                     tgacattattgattgcctgacgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTaa                                                >  1:2695068‑M2/47‑100 (MQ=255)
                                                     gTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTaa                                                >  1:3978918/1‑100 (MQ=255)
                                                     gTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTaa                                                >  1:148263/1‑100 (MQ=255)
                                                        aacgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATcc                                             >  2:3907267/1‑100 (MQ=255)
                                                        aacgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATcc                                             >  2:915912/1‑100 (MQ=255)
                                                        aacgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATc                                              >  1:2466997/1‑99 (MQ=255)
                                                        aacgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGAAATGAAAAGCGGAAACATAACCATGAAAGCGATCTTAATcc                                             >  2:867698/1‑100 (MQ=255)
                                                         acgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATccc                                            >  2:1963170/1‑100 (MQ=255)
                                                          cgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCa                                           >  1:554810/1‑100 (MQ=255)
                                                          cgaacgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCa                                           >  1:65918/1‑100 (MQ=255)
                                                           gaacgTATGCCTGATGCGGCGCGTTAGCATCGCATCAGGCAACCAATAATGGCAGAGATTAAAAGCGGAAACATATCGATGAAAGCGATCTTAATc                                              <  1:3658763/96‑1 (MQ=255)
                                                             acgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCAttt                                        >  2:443335/1‑100 (MQ=255)
                                                             acgTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGACAGATATGAAAAGCGGACACATATCGATGAAAGCGATCTTAATCCCAt                                          >  1:818014/1‑98 (MQ=255)
                                                                  tgcctgatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCAtgttt                                      >  1:606749‑M2/34‑97 (MQ=255)
                                                                  tgcctgatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtc                                   >  2:1702025‑M2/34‑100 (MQ=255)
                                                                  ggaCTGATGCGGCTCATTAGCATCGCATTAGGCAATCAATAATGTCAGATATGAAAAGCGGATACATATCGATTAAAGCGATCTTAATCccatttttttc                                   >  1:1500776‑M1/4‑97 (MQ=255)
                                                                  ggCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtc                                   <  1:4204562/100‑1 (MQ=255)
                                                                   gcctgatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtct                                  >  1:3723105‑M2/33‑100 (MQ=255)
                                                                   GCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCGGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtct                                  <  1:507307‑M1/100‑1 (MQ=255)
                                                                    cctgatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTAtctc                                 >  2:2167397‑M2/32‑100 (MQ=255)
                                                                    cctgatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTCAATCCCATTTTTAtctc                                 >  2:825528‑M2/32‑100 (MQ=255)
                                                                     ctgatgcgatgctaatgcgccgcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATctct                                >  1:1075741‑M2/31‑100 (MQ=255)
                                                                     CTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATctct                                <  1:255606‑M1/100‑1 (MQ=255)
                                                                      ngatgcgatgctaatgcgccggatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCtctt                               >  1:3058999‑M2/30‑100 (MQ=255)
                                                                      TGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCtctt                               <  2:2830758‑M1/100‑1 (MQ=255)
                                                                      TGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCtctt                               <  2:3253130‑M1/100‑1 (MQ=255)
                                                                        ATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCtcttct                             >  2:3191685‑M1/1‑100 (MQ=255)
                                                                         TGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTg                            >  1:1031974‑M1/1‑100 (MQ=255)
                                                                          GCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGa                           <  2:787921‑M1/100‑1 (MQ=255)
                                                                          GCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGa                           <  1:1396620‑M1/100‑1 (MQ=255)
                                                                           CGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGa                           <  1:4102659‑M1/99‑1 (MQ=255)
                                                                            GGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGAtt                         <  2:3114967‑M1/100‑1 (MQ=255)
                                                                             gcgcATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTc                        >  2:2570342/1‑100 (MQ=255)
                                                                              cgcATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGTAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTc                        <  1:1759128/99‑1 (MQ=255)
                                                                              cgcATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTcc                       <  2:743863/100‑1 (MQ=255)
                                                                                cATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGt                     >  2:467875/1‑100 (MQ=255)
                                                                                 cgatctatcgcatcAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGtt                    <  2:1269316/94‑1 (MQ=255)
                                                                                    aGCATCTCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAAc                 >  1:733361/1‑100 (MQ=255)
                                                                                    aGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAAc                 >  1:276847/1‑100 (MQ=255)
                                                                                       atcgcatcAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAAcccc              >  2:3151174/1‑100 (MQ=255)
                                                                                        tcgcatcAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCg             >  2:2432311/1‑100 (MQ=255)
                                                                                          gcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCa           >  2:2337905‑M2/10‑100 (MQ=255)
                                                                                          gcatcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCa           <  1:1446310‑M2/91‑1 (MQ=255)
                                                                                           catcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCaa          >  1:1293869‑M2/9‑100 (MQ=255)
                                                                                           catcaggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCaa          >  1:2659666‑M2/9‑100 (MQ=255)
                                                                                              caggcAATCAATAATGTCAGATATGAAAAGCGGAAACAGATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCt       <  2:1121086‑M2/95‑1 (MQ=255)
                                                                                               aggcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTg      >  2:2135839‑M2/5‑100 (MQ=255)
                                                                                                ggcAATCAATAATGTCCGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGc     >  2:515071‑M2/4‑100 (MQ=255)
                                                                                                 gcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGc     >  1:1656394‑M2/3‑99 (MQ=255)
                                                                                                 gcAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCa    <  2:4299226‑M2/98‑1 (MQ=255)
                                                                                                   aatcaatAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCAtt  <  1:90961/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GATGTGTTCGCTCTCCACCCTTGTGTTGGTATGGCTGGACCCGCGTCTGAAAAGTTAACGAACGTAGGCCTGATGCGGCGCATTAGCATCGCATCAGGCAATCAATAATGTCAGATATGAAAAGCGGAAACATATCGATGAAAGCGATCTTAATCCCATTTTTATCTCTTCTGATTCCGTTAACCCCGCAATCTGCATT  >  NC_000913/1040480‑1040678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.