| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2151683 | NA (NA) | 10 (0.120) | 8/156 | NT | NA | noncoding (10/28 nt) | REP148 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP148 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 2151691 | NA (NA) | noncoding (18/28 nt) | REP148 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP148 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
TACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2151574‑2151683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggttgaaGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTGA < NC_000913/2151691‑2151594 TACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACT > 1:2559308/1‑100TACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACT > 1:329727/1‑100 CCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGG > 1:1640682/1‑100 CCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGG > 2:1374991/1‑100 CCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGG > 2:1136191/1‑100 CATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC > 2:2145876/1‑100 ATTGCTCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTGCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC < 1:635887/99‑1 ATTGATCCTTTATTGGTCACCTATCTAAAAGAAGAAGCCGACGAGATAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGC < 1:1635907/99‑1 ATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCG < 1:1777214/100‑1 GATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTT > 1:753951/1‑100 CCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAA > 2:2182155/1‑100 ATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCG < 1:1175374/100‑1 CCAAAAGAAGAAGCCGACGAGCTAATAGTAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCC < 1:1063325/100‑1 CCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCC < 1:932300/100‑1 CCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCC < 2:351087/100‑1 CAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGATCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCCA < 2:2469186/100‑1 AAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCCAG < 2:1171482/100‑1 AAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTGCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCCAGT < 1:690760/100‑1 AGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCCAGTTT < 1:26402/100‑1 AGAAGCCGACGATCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAA < 1:1443820/100‑1 GAAGCCGACGAGCTAATAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAAC < 1:353738/100‑1 TGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAATCAATCAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTG < 2:53441/100‑1 TGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTG < 2:351233/100‑1 TGGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTG < 2:884644/100‑1 GGCGGTTGAAGGCAACAGTTCGACCGGCAGTTTAAACAATAAATATAGCGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTG < 1:2483176/99‑1 GGCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGG > 2:2018355/1‑100 GCGGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGA < 1:1313760/100‑1 GGTTGAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTTTTTTGGATA > 2:486186/1‑100 GAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTG < 2:1616501/100‑1 GAAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTG < 2:378810/100‑1 AAGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTGA < 2:1346884/100‑1 TACCATTGATCCTTTATTGGTCACCTATCCAAAAGAAGAAGCCGACGAGCTAAGAGCAAAATTAGTTCGCTAATCAGCCGTTATATTTATTGTTTAAACTGGCGGTTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2151574‑2151683‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcggttgaaGACAACAATTCAACCGCCAGTTTAAACAATAAATATAACGGCTGATTAGCGAACTAATTTTGCTCTTAGCTCGTCGGCTTCTTCTTTTGGATAGGTGA < NC_000913/2151691‑2151594 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |