New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 765068 =97 (1.060)15 (0.180) 8/166 NT 15.9% intergenic (+19/+85) sucD/mngR succinyl‑CoA synthetase, NAD(P)‑binding, alpha subunit/transcriptional repressor for the mannosyl‑D‑glycerate catabolic operon
?NC_000913 765107 = 68 (0.800)intergenic (+58/+46) sucD/mngR succinyl‑CoA synthetase, NAD(P)‑binding, alpha subunit/transcriptional repressor for the mannosyl‑D‑glycerate catabolic operon

Only 100 of 118 total aligned reads displayed.

GCTGCTCTGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGAT  >  NC_000913/764969‑765162
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ataccgatgactataaatttaccctgatagcgcagcgaaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgaca                                                                                                <  1:1869951‑M1/1‑1 (MQ=255)
 taccgatgactataaatttaccctgatagcgcagcgaaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAg                                                                                               <  2:1900005‑M1/2‑1 (MQ=255)
 taccgatgactataaatttaccctgatagcgcagcgaaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAg                                                                                               >  1:2512795‑M1/99‑100 (MQ=255)
   gctCTGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGcc                                                                                             >  1:115573/1‑100 (MQ=255)
   gctCTGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGcc                                                                                             <  1:299288/100‑1 (MQ=255)
      ctGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTc                                                                                          >  1:1954373/1‑100 (MQ=255)
       tGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGCAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTcg                                                                                         >  1:1092973/1‑100 (MQ=255)
        ggAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTcgc                                                                                        <  2:1856815/100‑1 (MQ=255)
         gAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTcgcc                                                                                       <  2:1417478/100‑1 (MQ=255)
         gAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTcgcc                                                                                       <  1:648330/100‑1 (MQ=255)
          aaGCCGCAGGCGTGAAATCCGTTCGCATCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCGcgcc                                                                                       <  2:341042/99‑1 (MQ=255)
            gCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATAGTTGTAATAAGAAATAGCACTcgccgc                                                                                     >  1:2550262/1‑99 (MQ=255)
            ataaatttaccctgatagcgcagcgaaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCt                                                                                    <  1:1919406‑M1/13‑1 (MQ=255)
             ncGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCtt                                                                                   >  1:1266473/2‑100 (MQ=255)
              cGCCGGCGTGAAATCCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAGACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTc                                                                                  <  2:608590/100‑1 (MQ=255)
              cGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTc                                                                                  <  2:1567771/100‑1 (MQ=255)
               gCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTcc                                                                                 <  2:2156268/100‑1 (MQ=255)
                cAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTccc                                                                                <  2:533492/100‑1 (MQ=255)
                  ggCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCctc                                                                              <  2:1193063/100‑1 (MQ=255)
                  ggCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCctc                                                                              >  2:2423753/1‑100 (MQ=255)
                   gCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCctct                                                                             <  1:1163571/100‑1 (MQ=255)
                    cGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTa                                                                            >  2:1708154/1‑100 (MQ=255)
                    cGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTa                                                                            >  1:1073589/1‑100 (MQ=255)
                     gTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTAc                                                                           >  1:1409371/1‑100 (MQ=255)
                      tGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACa                                                                          >  1:1862715/1‑100 (MQ=255)
                       gAAAACCGTTCTCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAg                                                                         >  1:1987425/1‑100 (MQ=255)
                       gAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAg                                                                         >  1:391028/1‑100 (MQ=255)
                       gAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAg                                                                         >  2:1344350/1‑100 (MQ=255)
                       gAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAg                                                                         >  2:2381852/1‑100 (MQ=255)
                       gAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAg                                                                         <  1:1897159/100‑1 (MQ=255)
                       gAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAAAAAGAAATAACCCTCGCCGCTTCCCTCTACAg                                                                         >  1:1744067/1‑100 (MQ=255)
                         aaaCCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGa                                                                       >  2:1839793/1‑100 (MQ=255)
                         aaaCCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGa                                                                       >  1:72786/1‑100 (MQ=255)
                          aaCCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGaa                                                                      <  2:560115/100‑1 (MQ=255)
                          aaCCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGaa                                                                      <  2:192664/100‑1 (MQ=255)
                             cGTTCGCAGCTTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATg                                                                    <  1:502475/99‑1 (MQ=255)
                               ttCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCg                                                                 >  1:539054/1‑100 (MQ=255)
                                  gCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAg                                                              <  1:2172823/100‑1 (MQ=255)
                                   cAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAgg                                                             >  2:1337792/1‑100 (MQ=255)
                                    gaaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAggg                                                            >  2:1948236‑M1/64‑100 (MQ=255)
                                    gaaaatcatcgcgataagcacaaaaaaggccatcagacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAggg                                                            >  1:1841610‑M1/64‑100 (MQ=255)
                                     gCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGc                                                           <  2:64790/100‑1 (MQ=255)
                                     gCCTGGAGGATATCGGTGAAGCACTGAAAACTGGTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGc                                                           <  1:543432/100‑1 (MQ=255)
                                     aaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGc                                                           >  1:1959271‑M1/63‑100 (MQ=255)
                                     aaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGc                                                           >  1:192332‑M1/63‑100 (MQ=255)
                                     aaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGc                                                           >  2:2537950‑M1/63‑100 (MQ=255)
                                     aaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGc                                                           >  1:2487566‑M1/63‑100 (MQ=255)
                                     aaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGc                                                           >  2:725935‑M1/63‑100 (MQ=255)
                                     aaaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGc                                                           >  1:962350‑M1/63‑100 (MQ=255)
                                      aaatcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCt                                                          >  1:469813‑M1/62‑100 (MQ=255)
                                       cTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTg                                                         >  1:269293/1‑100 (MQ=255)
                                       cTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTg                                                         <  1:1522324/100‑1 (MQ=255)
                                        atcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCACTTCCCTCTACAGGAATGGCGAAGGGCTGt                                                        >  2:2140561‑M1/60‑100 (MQ=255)
                                           atcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGGGAAGGGCTGTCgg                                                     >  2:1744292‑M1/57‑100 (MQ=255)
                                             cgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGtt                                                   >  2:1919416‑M1/55‑100 (MQ=255)
                                               tatCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAGGGGCTGTCGGTTTc                                                 >  1:1085610/1‑100 (MQ=255)
                                               tatCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTc                                                 >  2:918747/1‑100 (MQ=255)
                                                atCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCg                                                <  2:1571396/100‑1 (MQ=255)
                                                 tCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGa                                               >  1:1914298/1‑100 (MQ=255)
                                                  cGGTGAAGCACTTAAAACTGATCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCATCCAACTACAGGAATGGCGAAGGGCTGTCGGTTTCGAc                                              >  1:960453/1‑100 (MQ=255)
                                                  cGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAAGAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGa                                               <  1:1662751/99‑1 (MQ=255)
                                                   ggTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACa                                             >  2:30828/1‑100 (MQ=255)
                                                      gAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATGGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATgg                                          >  2:2072733/1‑100 (MQ=255)
                                                      gAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATgg                                          >  2:21216/1‑100 (MQ=255)
                                                       aaGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGt                                         <  2:228369/100‑1 (MQ=255)
                                                         gCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTg                                       >  1:2420343/1‑100 (MQ=255)
                                                          cACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTgg                                      <  1:2454848/100‑1 (MQ=255)
                                                            cTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGc                                     >  1:573097/1‑99 (MQ=255)
                                                             tGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCa                                   >  2:366086/1‑100 (MQ=255)
                                                                aaaCTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCg                                <  1:1337785/100‑1 (MQ=255)
                                                                  aCTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTa                              <  2:120640/100‑1 (MQ=255)
                                                                  aCTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTCCGACATGGTTGGCCATCGTa                              <  1:1577519/100‑1 (MQ=255)
                                                                   cTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTat                             >  2:1555701/1‑100 (MQ=255)
                                                                    tGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTatg                            <  2:2504965/100‑1 (MQ=255)
                                                                    tGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTatg                            <  1:822398/100‑1 (MQ=255)
                                                                      ttCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTatgat                          <  2:297846/100‑1 (MQ=255)
                                                                       tCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTatgatg                         >  1:241666/1‑100 (MQ=255)
                                                                       tCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGCCGGTTTCGACCTGGTTGGCCATCGTatgat                          >  1:502480/1‑99 (MQ=255)
                                                                        ttccgatctatatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATgg                        <  1:2495372/91‑1 (MQ=255)
                                                                         tGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGc                       >  2:2203550/1‑100 (MQ=255)
                                                                             ataaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaac                   <  2:2275879/100‑4 (MQ=255)
                                                                              taaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaacc                  <  2:557464/100‑5 (MQ=255)
                                                                               aaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaacca                 <  2:933995/100‑6 (MQ=255)
                                                                               aaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaacca                 <  2:2452885/100‑6 (MQ=255)
                                                                               aaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaacca                 <  2:1987436/100‑6 (MQ=255)
                                                                                aataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCtttttt                <  2:1898315/100‑1 (MQ=255)
                                                                                 atatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATggagatcggaa               >  2:2495391/1‑91 (MQ=255)
                                                                                  tatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTtgt              >  2:1589048/1‑100 (MQ=255)
                                                                                  tatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTtgt              <  1:1043651/100‑1 (MQ=255)
                                                                                  tatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTtgt              <  2:2031004/100‑1 (MQ=255)
                                                                                   atCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTtgtg             >  1:2204004/1‑100 (MQ=255)
                                                                                    tCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGTTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGc            >  1:2536384/1‑100 (MQ=255)
                                                                                     cTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTTCt           >  1:792381/1‑100 (MQ=255)
                                                                                         nataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATc       >  1:695505/2‑100 (MQ=255)
                                                                                          ataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcg      >  1:2118236/1‑100 (MQ=255)
                                                                                          ataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcg      >  2:1830704/1‑100 (MQ=255)
                                                                                          ataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcg      >  2:761152/1‑100 (MQ=255)
                                                                                          ataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcg      >  2:1523658/1‑100 (MQ=255)
                                                                                           taaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcgc     >  1:2283852/1‑100 (MQ=255)
                                                                                              gAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCgat  <  1:2116437/100‑1 (MQ=255)
                                                                                                   |                                                                                              
GCTGCTCTGGAAGCCGCAGGCGTGAAAACCGTTCGCAGCCTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGAT  >  NC_000913/764969‑765162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.