New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 765068 =97 (1.060)15 (0.180) 8/166 NT 15.9% intergenic (+19/+85) sucD/mngR succinyl‑CoA synthetase, NAD(P)‑binding, alpha subunit/transcriptional repressor for the mannosyl‑D‑glycerate catabolic operon
?NC_000913 765107 = 68 (0.800)intergenic (+58/+46) sucD/mngR succinyl‑CoA synthetase, NAD(P)‑binding, alpha subunit/transcriptional repressor for the mannosyl‑D‑glycerate catabolic operon

Only 100 of 110 total aligned reads displayed.

CTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTAT  >  NC_000913/765008‑765205
                                                                                                   |                                                                                                  
cTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTg                                                                                                    >  1:269293/1‑100 (MQ=255)
cTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTg                                                                                                    <  1:1522324/100‑1 (MQ=255)
 atcatcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCACTTCCCTCTACAGGAATGGCGAAGGGCTGt                                                                                                   >  2:2140561‑M1/60‑100 (MQ=255)
    atcgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGGGAAGGGCTGTCgg                                                                                                >  2:1744292‑M1/57‑100 (MQ=255)
      cgcgataagcacaaaaaaggccatcatacgatggccaaccatgtcgaaaccgacAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGtt                                                                                              >  2:1919416‑M1/55‑100 (MQ=255)
        tatCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAGGGGCTGTCGGTTTc                                                                                            >  1:1085610/1‑100 (MQ=255)
        tatCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTc                                                                                            >  2:918747/1‑100 (MQ=255)
         atCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCg                                                                                           <  1:435110/100‑1 (MQ=255)
         atCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCg                                                                                           <  2:1571396/100‑1 (MQ=255)
          tCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGa                                                                                          >  1:1914298/1‑100 (MQ=255)
           cGGTGAAGCACTTAAAACTGATCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCATCCAACTACAGGAATGGCGAAGGGCTGTCGGTTTCGAc                                                                                         >  1:960453/1‑100 (MQ=255)
           cGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAAGAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGa                                                                                          <  1:1662751/99‑1 (MQ=255)
            ggTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACa                                                                                        >  2:30828/1‑100 (MQ=255)
               gAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATGGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATgg                                                                                     >  2:2072733/1‑100 (MQ=255)
               gAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATgg                                                                                     >  2:21216/1‑100 (MQ=255)
                aaGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGt                                                                                    <  2:228369/100‑1 (MQ=255)
                  gCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTg                                                                                  <  1:872052/100‑1 (MQ=255)
                  gCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTg                                                                                  >  1:2420343/1‑100 (MQ=255)
                   cACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTgg                                                                                 <  1:2454848/100‑1 (MQ=255)
                     cTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGc                                                                                >  1:573097/1‑99 (MQ=255)
                      tGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCa                                                                              >  2:366086/1‑100 (MQ=255)
                         aaaCTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCg                                                                           <  1:1337785/100‑1 (MQ=255)
                           aCTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTa                                                                         <  2:120640/100‑1 (MQ=255)
                           aCTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTa                                                                         <  2:639361/100‑1 (MQ=255)
                           aCTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTCCGACATGGTTGGCCATCGTa                                                                         <  1:1577519/100‑1 (MQ=255)
                            cTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTat                                                                        >  2:1607883/1‑100 (MQ=255)
                            cTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTat                                                                        >  2:1555701/1‑100 (MQ=255)
                             tGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTatg                                                                       <  1:822398/100‑1 (MQ=255)
                             tGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTatg                                                                       <  2:2504965/100‑1 (MQ=255)
                               ttCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTatgat                                                                     <  2:297846/100‑1 (MQ=255)
                                tCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTatgatg                                                                    >  1:241666/1‑100 (MQ=255)
                                tCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGCCGGTTTCGACCTGGTTGGCCATCGTatgat                                                                     >  1:502480/1‑99 (MQ=255)
                                 ttccgatctatatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATgg                                                                   <  1:2495372/91‑1 (MQ=255)
                                  tGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGc                                                                  >  2:2203550/1‑100 (MQ=255)
                                      ataaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaac                                                              <  1:2528335/100‑4 (MQ=255)
                                      ataaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaac                                                              <  2:2275879/100‑4 (MQ=255)
                                       taaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaacc                                                             <  2:557464/100‑5 (MQ=255)
                                        aaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaacca                                                            <  2:1987436/100‑6 (MQ=255)
                                        aaataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCATACGATGGccaacca                                                            <  2:933995/100‑6 (MQ=255)
                                         aataTCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCtttttt                                                           <  2:1898315/100‑1 (MQ=255)
                                          atatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATggagatcggaa                                                          >  2:2495391/1‑91 (MQ=255)
                                           tatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTtgt                                                         <  2:2031004/100‑1 (MQ=255)
                                           tatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTtgt                                                         <  1:1043651/100‑1 (MQ=255)
                                           tatCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTtgt                                                         >  2:1589048/1‑100 (MQ=255)
                                            atCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTtgtg                                                        >  1:2204004/1‑100 (MQ=255)
                                             tCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGTTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGc                                                       >  1:2536384/1‑100 (MQ=255)
                                              cTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTTCt                                                      >  1:792381/1‑100 (MQ=255)
                                                gTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTa                                                    >  2:33175/1‑100 (MQ=255)
                                                 taataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTAt                                                   >  1:1903208/1‑100 (MQ=255)
                                                  nataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATc                                                  >  1:695505/2‑100 (MQ=255)
                                                  aataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATAGCGAAGGGCTGCCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTAt                                                   >  1:611207/1‑99 (MQ=255)
                                                   ataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcg                                                 >  2:761152/1‑100 (MQ=255)
                                                   ataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcg                                                 >  1:2118236/1‑100 (MQ=255)
                                                   ataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcg                                                 >  2:1830704/1‑100 (MQ=255)
                                                   ataaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcg                                                 >  2:1523658/1‑100 (MQ=255)
                                                    taaGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcgc                                                >  1:2283852/1‑100 (MQ=255)
                                                     aaccgacagcccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATcgcg                                               >  2:1919416‑M2/47‑100 (MQ=255)
                                                       gAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCgat                                             <  1:2116437/100‑1 (MQ=255)
                                                       ccgacagcccttccccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCgat                                             >  2:1744292‑M2/45‑100 (MQ=255)
                                                          acagcccttcgccattcctgtagagggaagtggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCgatgat                                          >  2:2140561‑M2/42‑100 (MQ=255)
                                                            agcccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGAttt                                        >  1:469813‑M2/40‑100 (MQ=255)
                                                             gcccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGAtttt                                       >  2:2537950‑M2/39‑100 (MQ=255)
                                                             gcccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGAtttt                                       >  1:1959271‑M2/39‑100 (MQ=255)
                                                             gcccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGAtttt                                       >  1:962350‑M2/39‑100 (MQ=255)
                                                             gcccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGAtttt                                       >  2:725935‑M2/39‑100 (MQ=255)
                                                             gcccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGAtttt                                       >  1:2487566‑M2/39‑100 (MQ=255)
                                                             gcccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGAtttt                                       >  1:192332‑M2/39‑100 (MQ=255)
                                                             gcccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGAtttt                                       >  2:2012460‑M2/39‑100 (MQ=255)
                                                             GCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGAtttt                                       <  2:751780‑M1/100‑1 (MQ=255)
                                                              cccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTCTGATGGCCTTTTTTGTGCTTATCGCGATGATTTTc                                      >  1:1841610‑M2/38‑100 (MQ=255)
                                                              cccttcgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTc                                      >  2:1948236‑M2/38‑100 (MQ=255)
                                                              CCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTc                                      <  1:380617‑M1/100‑1 (MQ=255)
                                                              CCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTc                                      >  2:539056‑M1/1‑100 (MQ=255)
                                                              CCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTc                                      <  2:316428‑M1/100‑1 (MQ=255)
                                                               ctTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCg                                     >  1:2364052‑M1/3‑100 (MQ=255)
                                                               CCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCg                                     <  2:695370‑M1/100‑1 (MQ=255)
                                                                CTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGc                                    >  1:1839783‑M1/1‑100 (MQ=255)
                                                                 TCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCt                                   <  2:2386476‑M1/100‑1 (MQ=255)
                                                                   gccgcTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTgc                                 <  1:2203535/100‑1 (MQ=255)
                                                                   cgccattcctgtagagggaagcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTgc                                 >  2:1889676‑M2/33‑100 (MQ=255)
                                                                     cgcTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTgcgc                               >  2:2140617/1‑100 (MQ=255)
                                                                      gcTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATTTCGATGATGTTCGCTGCGCt                              >  1:352439/1‑100 (MQ=255)
                                                                       cTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTa                             >  2:14768/1‑100 (MQ=255)
                                                                          cccTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCa                          <  1:147798/100‑1 (MQ=255)
                                                                                aCAGGAATGGCGAAGGGCTGTAGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATTAGGGTaa                    >  1:2540905/1‑100 (MQ=255)
                                                                                 cAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTaaa                   <  1:1726610/100‑1 (MQ=255)
                                                                                   ggAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAAtt                 >  2:2227959/1‑100 (MQ=255)
                                                                                   ggAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAAtt                 >  2:1965659/1‑100 (MQ=255)
                                                                                      agcggcgagggctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTtat              <  1:1919406‑M2/87‑1 (MQ=255)
                                                                                        ggCGAAGGGTTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAg            <  2:2536403/100‑1 (MQ=255)
                                                                                        ggCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCTCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAg            <  1:1380692/100‑1 (MQ=255)
                                                                                        ggCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAg            <  1:2207496/100‑1 (MQ=255)
                                                                                        ggCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAg            >  1:2550973/1‑100 (MQ=255)
                                                                                        ggCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAg            >  2:857953/1‑100 (MQ=255)
                                                                                         gCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGt           <  2:337978/100‑1 (MQ=255)
                                                                                         gCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGt           <  2:1761663/100‑1 (MQ=255)
                                                                                         gCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGGATGATGGCCTTTTTTGTACTTATCGCGCTGATTTTCGCTGCGCTATCAGGGTAAATTTCTAg            >  1:884205/1‑99 (MQ=255)
                                                                                           gAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCa         <  1:1422456/100‑1 (MQ=255)
                                                                                                 ctGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTa   <  2:1900005‑M2/98‑1 (MQ=255)
                                                                                                  tGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTAt  <  1:1869951‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
CTGGCGGATATCGGTGAAGCACTGAAAACTGTTCTGAAATAAATATCTGTAATAAGAAATAGCCCTCGCCGCTTCCCTCTACAGGAATGGCGAAGGGCTGTCGGTTTCGACATGGTTGGCCATCGTATGATGGCCTTTTTTGTGCTTATCGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTAT  >  NC_000913/765008‑765205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.