New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 900753 =NA (NA)5 (0.060) 4/164 NT NA noncoding (5/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 900783 = NA (NA)noncoding (35/87 nt) REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 125 total aligned reads displayed.

ATATGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAAT  >  NC_000913/900654‑900852
                                                                                                   |                                                                                                   
cgaacggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtg                                                                                                     <  1:1140157‑M1/1‑1 (MQ=255)
cgaacggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtg                                                                                                     <  2:490854‑M1/1‑1 (MQ=255)
  atGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGcc                                                                                                   >  1:43395/1‑100 (MQ=255)
  atGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGcc                                                                                                   >  2:454832/1‑100 (MQ=255)
   tGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCg                                                                                                  <  1:104674/100‑1 (MQ=255)
   acggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGcc                                                                                                   >  1:2523545‑M1/97‑99 (MQ=255)
   acggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCg                                                                                                  <  2:2175499‑M1/4‑1 (MQ=255)
    gtaaTAAACATGATTAAATAATTTAAAGGAAATAAAAAAGACGGATAACGTAGCGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCgg                                                                                                 <  1:1184888/98‑1 (MQ=255)
    gCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCgg                                                                                                 >  2:1303447/1‑100 (MQ=255)
    gCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCgg                                                                                                 >  2:943226/1‑100 (MQ=255)
     ggcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGa                                                                                                <  2:1611336‑M1/6‑1 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGa                                                                                                >  2:966118/1‑100 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGa                                                                                                >  1:2168158/1‑100 (MQ=255)
     cAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGa                                                                                                >  2:71276/1‑100 (MQ=255)
      gcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGAt                                                                                               <  1:1550109‑M1/7‑1 (MQ=255)
      gcgaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGAt                                                                                               >  1:2175485‑M1/94‑100 (MQ=255)
      aaTAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGAt                                                                                               >  2:1688299/1‑100 (MQ=255)
       aTAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATa                                                                                              >  1:1316954/1‑100 (MQ=255)
        tAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATaa                                                                                             >  2:2482176/1‑100 (MQ=255)
        tAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATaa                                                                                             >  1:811152/1‑100 (MQ=255)
        gaaattaatgtggctgcgtacattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCcggaggc                                                                                             <  2:1707716‑M1/9‑4 (MQ=255)
          aaCATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAgg                                                                                           >  1:25539/1‑100 (MQ=255)
            cATGATTAAATAATTTACATGAAATAAAAAAGACGGACAACTTAGTGCGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCg                                                                                         <  1:1019478/100‑1 (MQ=255)
            cATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCg                                                                                         <  1:870779/100‑1 (MQ=255)
            cATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATCCACTATGTAGGCCGGATAAGGCg                                                                                         <  1:2091032/100‑1 (MQ=255)
                  tAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCCCTATGTAGGCCGGATAAGGCGTCCccg                                                                                   >  2:2184796/1‑100 (MQ=255)
                  tAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCccg                                                                                   >  2:2184812/1‑100 (MQ=255)
                   aaaTAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCccgc                                                                                  <  1:578331/100‑1 (MQ=255)
                    aataatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCccgcc                                                                                 <  1:1259619/100‑1 (MQ=255)
                    aataatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCccgcc                                                                                 <  2:1316961/100‑1 (MQ=255)
                      taatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCcgccgc                                                                               >  1:726890/1‑100 (MQ=255)
                       aatTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCa                                                                              <  1:125359/100‑1 (MQ=255)
                        atTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCAt                                                                             >  2:899945/1‑100 (MQ=255)
                         tttAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATc                                                                            >  2:137702/1‑100 (MQ=255)
                         tttAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATc                                                                            >  1:745515/1‑100 (MQ=255)
                          ttAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATcc                                                                           <  1:1851208/100‑1 (MQ=255)
                          ttAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATcc                                                                           <  2:454371/100‑1 (MQ=255)
                          ttAAATGAAATAAAAAAGACGGACAACTTAGGGGGTTGGCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATcc                                                                           <  2:351872/100‑1 (MQ=255)
                           tAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTTTCCGTCTTCAGTATAAGAATTTATGCACTATGTAGGCCGGCTAAGGCGTCCCCGCCGCATCCg                                                                          >  1:925054/1‑100 (MQ=255)
                            cattcgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctctGCCGGATAAGGCGTCCCCGCCGCATCCgg                                                                         <  1:176071‑M1/29‑1 (MQ=255)
                              aTGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCACTATAAGAATTTACGCACCATTTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGc                                                                        <  1:1181854/99‑1 (MQ=38)
                               tGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcac                                                                      >  2:294549/1‑100 (MQ=255)
                                gAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                     >  1:1272590/1‑100 (MQ=255)
                                gAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                     >  1:1790953/1‑100 (MQ=255)
                                cgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                     >  2:176072‑M1/68‑100 (MQ=255)
                                 gccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAg                                                                    >  1:59087‑M1/67‑100 (MQ=255)
                                 aaaTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAg                                                                    <  2:613885/100‑1 (MQ=255)
                                   cggggggttttgtacgtctgataagacgcgccagcgtcgcatcagacaccagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                  >  1:609527‑M1/65‑100 (MQ=255)
                                   aTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                  >  1:2087091/1‑100 (MQ=255)
                                     naaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCAc                                                                >  1:66/2‑100 (MQ=255)
                                       aaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCg                                                              <  2:93871/100‑1 (MQ=255)
                                       aaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCg                                                              <  2:1420678/100‑1 (MQ=255)
                                          ttccgatctaCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGc                                                           <  2:1206448/91‑1 (MQ=255)
                                           gACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCt                                                          >  2:669471/1‑100 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGGTAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGc                                                           >  1:47221/1‑97 (MQ=255)
                                             cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                        <  1:1262692/100‑1 (MQ=255)
                                              ggACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                       >  1:1628989/1‑100 (MQ=255)
                                               gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                      >  2:2119904/1‑100 (MQ=255)
                                               gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                      >  1:1870987/1‑100 (MQ=255)
                                                   aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTg                                                  >  2:768516/1‑100 (MQ=255)
                                                        gTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGc                                              >  1:114799/1‑99 (MQ=255)
                                                          gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGa                                            >  2:919896/1‑99 (MQ=255)
                                                          gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGAc                                           >  2:364886/1‑100 (MQ=255)
                                                           ggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACg                                          <  2:325320/100‑1 (MQ=255)
                                                                tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                     >  2:2298154/1‑100 (MQ=255)
                                                                  cctCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcgc                                   >  1:2391598/3‑100 (MQ=255)
                                                                   gTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                  <  1:1056899/100‑1 (MQ=255)
                                                                    tCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGt                                 >  2:822560/1‑100 (MQ=255)
                                                                     cTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTc                                <  2:2095715/100‑1 (MQ=255)
                                                                     cTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTc                                >  1:97948/1‑100 (MQ=255)
                                                                      ttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCt                               >  1:1430993/1‑100 (MQ=255)
                                                                       tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                              >  1:1980284/1‑100 (MQ=255)
                                                                       tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                              >  1:431487/1‑100 (MQ=255)
                                                                        cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTa                             <  1:1045591/100‑1 (MQ=255)
                                                                        cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTa                             >  2:1980651/1‑100 (MQ=255)
                                                                        cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCAGCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTa                             <  1:879917/100‑1 (MQ=255)
                                                                          ttATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATc                           <  2:159119/100‑1 (MQ=255)
                                                                          ttATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATc                           <  2:1920660/100‑1 (MQ=255)
                                                                           tataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCa                          <  2:1460596/100‑1 (MQ=255)
                                                                            ataAGAATTTATGCACTATGTAGTCCGGATAAGGCGTCCCCGTCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATc                           <  2:1772462/98‑1 (MQ=255)
                                                                            ataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATACGACGCTGGCGCGTCTTATCAg                         >  2:214113/1‑100 (MQ=255)
                                                                             taAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGa                        >  2:2193485/1‑100 (MQ=255)
                                                                             taAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGa                        >  2:1140161/1‑100 (MQ=255)
                                                                              aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAc                       >  2:468563/1‑100 (MQ=255)
                                                                              aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGACTGATGCGACGCTGGCGCGTCTTATCAGAc                       >  1:2012843/1‑100 (MQ=255)
                                                                               aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                      >  2:383423/1‑100 (MQ=255)
                                                                                 aaTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTa                    <  2:952999/100‑1 (MQ=255)
                                                                                 aaTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTa                    <  1:2593144/100‑1 (MQ=255)
                                                                                       tGCACTATGTAGGTCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc              <  1:48681/100‑1 (MQ=255)
                                                                                        gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcc             >  1:2247556/1‑100 (MQ=255)
                                                                                        gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcc             >  2:2135506/1‑100 (MQ=255)
                                                                                        gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcc             >  2:2500148/1‑100 (MQ=255)
                                                                                         cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGCTGCGACGCTGGCGCGTATTATAAGCCCTaaacaaacc            >  2:1119858/1‑92 (MQ=37)
                                                                                         cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc            <  2:1221012/100‑1 (MQ=255)
                                                                                                  ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa   >  2:61005/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa   >  1:2553083/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa   >  2:129996/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGAGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa   >  2:1509723/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCCGATGCGACGCTGGCGCGACCTAACAGACCTACAACACCCCCCGGCg     >  1:714028/1‑98 (MQ=38)
                                                                                                   GCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAAt  <  2:1537491‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATATGCAATAAACATGATTAAATAATTTAAATGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAAT  >  NC_000913/900654‑900852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.