BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	900753 =	NA (NA)	5 (0.060)	4/164	NT	NA	noncoding (5/87 nt)	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	900783 =	NA (NA)	5 (0.060)	4/164	NT	NA	noncoding (35/87 nt)	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP83 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 122 total aligned reads displayed.

TGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCG  >  NC_000913/900685‑900881

tGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcac                                                                                                   >  1:2092625/1‑100 (MQ=255)

tGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcac                                                                                                   >  2:294549/1‑100 (MQ=255)

 gAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                                                  >  1:1790953/1‑100 (MQ=255)

 gAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                                                  >  1:1272590/1‑100 (MQ=255)

 cgccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGcaca                                                                                                  >  2:176072‑M1/68‑100 (MQ=255)

  gccggggggttttgtaggtctgataagacgcgccagcgtcgcatcagacatcagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAg                                                                                                 >  1:59087‑M1/67‑100 (MQ=255)

    cggggggttttgtacgtctgataagacgcgccagcgtcgcatcagacaccagcacggtgcctgtGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                                               >  1:609527‑M1/65‑100 (MQ=255)

    aTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                                               >  1:2087091/1‑100 (MQ=255)

    aTAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTGCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGc                                                                                               <  2:1382161/100‑1 (MQ=255)

      naaaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCAc                                                                                             >  1:66/2‑100 (MQ=255)

        aaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCg                                                                                           <  2:1420678/100‑1 (MQ=255)

        aaaaGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCg                                                                                           <  2:93871/100‑1 (MQ=255)

            gACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCt                                                                                       >  2:669471/1‑100 (MQ=255)

              cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGGTAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGc                                                                                        >  1:47221/1‑97 (MQ=255)

              cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                                                     >  1:264006/1‑100 (MQ=255)

              cGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGa                                                                                     <  1:1262692/100‑1 (MQ=255)

               ggACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGAt                                                                                    >  1:1628989/1‑100 (MQ=255)

                gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                                                   >  2:2119904/1‑100 (MQ=255)

                gACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATg                                                                                   >  1:1870987/1‑100 (MQ=255)

                    aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTg                                                                               >  1:70002/1‑100 (MQ=255)

                    aCTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTg                                                                               >  2:768516/1‑100 (MQ=255)

                     cTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGa                                                                              >  1:827524/1‑100 (MQ=255)

                      ttAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGAt                                                                             <  2:2168172/100‑1 (MQ=255)

                         gTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGc                                                                           >  1:114799/1‑99 (MQ=255)

                           gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGa                                                                         >  2:919896/1‑99 (MQ=255)

                           gggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGAc                                                                        >  2:364886/1‑100 (MQ=255)

                            ggTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACg                                                                       <  2:500353/100‑1 (MQ=255)

                              ttGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCt                                                                     >  2:444891/1‑100 (MQ=255)

                               tGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTg                                                                    >  2:1543712/1‑100 (MQ=255)

                                 tCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgc                                                                  >  2:2298154/1‑100 (MQ=255)

                                   cctCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGgcgc                                                                >  1:2391598/3‑100 (MQ=255)

                                    gttttCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                                               <  2:2075981/97‑1 (MQ=255)

                                    gTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGcgcg                                                               <  1:1056899/100‑1 (MQ=255)

                                      cTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTc                                                             <  2:2095715/100‑1 (MQ=255)

                                      cTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTc                                                             >  1:97948/1‑100 (MQ=255)

                                        tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                                                           >  1:431487/1‑100 (MQ=255)

                                        tCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCtt                                                           >  1:1980284/1‑100 (MQ=255)

                                         cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTa                                                          >  2:1980651/1‑100 (MQ=255)

                                         cATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTa                                                          <  1:1045591/100‑1 (MQ=255)

                                           ttATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATc                                                        <  2:1920660/100‑1 (MQ=255)

                                            tataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCa                                                       <  2:1460596/100‑1 (MQ=255)

                                             ataAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATACGACGCTGGCGCGTCTTATCAg                                                      >  2:214113/1‑100 (MQ=255)

                                              taAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGa                                                     >  2:2193485/1‑100 (MQ=255)

                                              taAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGa                                                     >  2:1140161/1‑100 (MQ=255)

                                               aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAc                                                    >  2:468563/1‑100 (MQ=255)

                                               aaGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGACTGATGCGACGCTGGCGCGTCTTATCAGAc                                                    >  1:2012843/1‑100 (MQ=255)

                                                aGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGAcc                                                   >  2:383423/1‑100 (MQ=255)

                                                  aaTTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTa                                                 <  2:952999/100‑1 (MQ=255)

                                                        tGCACTATGTAGGTCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAc                                           <  1:48681/100‑1 (MQ=255)

                                                         gCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAcc                                          >  2:2135506/1‑100 (MQ=255)

                                                          cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGCTGCGACGCTGGCGCGTATTATAAGCCCTaaacaaacc                                         >  2:1119858/1‑92 (MQ=37)

                                                          cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                         <  2:1221012/100‑1 (MQ=255)

                                                          cACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAAccc                                         >  2:1091564/1‑100 (MQ=255)

                                                                ctgtgccggatgcggcggggacgccttatccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCg                                     >  1:1299336‑M2/35‑98 (MQ=255)

                                                                ctgtgccggatgcggcggggacgccttatccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGc                                   >  1:59087‑M2/35‑100 (MQ=255)

                                                                 tgtgccggatgcggcggggacgccttatccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCg                                  >  2:176072‑M2/34‑100 (MQ=255)

                                                                   ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                >  2:129996/1‑100 (MQ=255)

                                                                   ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                >  1:2553083/1‑100 (MQ=255)

                                                                   ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                >  2:61005/1‑100 (MQ=255)

                                                                   ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGAGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGaa                                >  2:1509723/1‑100 (MQ=255)

                                                                   ggCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCCGATGCGACGCTGGCGCGACCTAACAGACCTACAACACCCCCCGGCg                                  >  1:714028/1‑98 (MQ=38)

                                                                    GCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAAt                               <  2:1537491‑M1/100‑1 (MQ=255)

                                                                     ccggatgcggcggggacgccttatccggcAGAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                              <  1:176071‑M2/71‑1 (MQ=255)

                                                                     CCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                              >  1:614259‑M1/1‑100 (MQ=255)

                                                                     CCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                              >  1:36011‑M1/1‑100 (MQ=255)

                                                                     CCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATg                              >  1:1426073‑M1/1‑100 (MQ=255)

                                                                      CGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAAt                               >  2:2483803‑M1/1‑98 (MQ=255)

                                                                      CGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGt                             <  2:1998152‑M1/100‑1 (MQ=255)

                                                                       GGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTa                            >  2:1229616‑M1/1‑100 (MQ=255)

                                                                        GATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGtan                           >  2:66‑M1/1‑99 (MQ=255)

                                                                        GATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTAc                           >  1:1927803‑M1/1‑100 (MQ=255)

                                                                         ATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACg                          >  2:980105‑M1/1‑100 (MQ=255)

                                                                         ATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACg                          >  2:43396‑M1/1‑100 (MQ=255)

                                                                           aaGGCGTCCCCGCCGCATCCGGCCCCGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTTCAAAACCCCCCGGCGAATGTACg                          <  1:1210928/98‑1 (MQ=255)

                                                                           aaGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTCATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCa                        >  1:1377013/1‑100 (MQ=255)

                                                                            aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAg                       >  1:167748/1‑100 (MQ=255)

                                                                            aGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAg                       >  1:1648789/1‑100 (MQ=255)

                                                                             ggCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGc                      >  2:2450201/1‑100 (MQ=255)

                                                                             ggCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGc                      >  1:1149705/1‑100 (MQ=255)

                                                                             ggCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGc                      >  1:541841/1‑100 (MQ=255)

                                                                             ggCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGc                      >  2:740325/1‑100 (MQ=255)

                                                                              gCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGcc                     <  2:2520884/100‑1 (MQ=255)

                                                                                gTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGc                      <  1:1528655/97‑1 (MQ=255)

                                                                                  ccccGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAt                 >  1:2419461/1‑100 (MQ=255)

                                                                                  ccccGCAGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAt                 >  1:1326999/1‑100 (MQ=255)

                                                                                   cccGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAtt                >  2:305976/1‑100 (MQ=255)

                                                                                   cccGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACAtt                >  2:790490/1‑100 (MQ=255)

                                                                                    ccgccgCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTa               >  2:597930/1‑100 (MQ=255)

                                                                                       ccgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAAtt            <  2:25540/100‑1 (MQ=255)

                                                                                        cgcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAAttt           <  2:2251315/100‑1 (MQ=255)

                                                                                         gcctccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTc          <  2:1707716‑M2/91‑1 (MQ=255)

                                                                                         gcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTc          >  1:1267491/1‑100 (MQ=255)

                                                                                         gcATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTc          >  1:1233765/1‑100 (MQ=255)

                                                                                           atccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGc        <  1:1550109‑M2/93‑1 (MQ=255)

                                                                                           atccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGc        >  1:2175485‑M2/8‑100 (MQ=255)

                                                                                            tccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGcc       <  2:1611336‑M2/94‑1 (MQ=255)

                                                                                             ccggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCg      >  2:123505‑M2/6‑100 (MQ=255)

                                                                                               ggcACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGt     >  1:2523545‑M2/4‑99 (MQ=255)

                                                                                                 cACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg  <  2:490854‑M2/99‑1 (MQ=255)

                                                                                                 cACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCg  <  1:1140157‑M2/99‑1 (MQ=255)

TGAAATAAAAAAGACGGACAACTTAGTGGGTTGTCCGTCTTCATTATAAGAATTTATGCACTATGTAGGCCGGATAAGGCGTCCCCGCCGCATCCGGCACAGGCACCGTGCTGATGTCTGATGCGACGCTGGCGCGTCTTATCAGACCTACAAAACCCCCCGGCGAATGTACGCAGCCACATTAATTTCGCCGTTCG  >  NC_000913/900685‑900881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.