New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1460515 =96 (1.050)15 (0.180) 9/164 NT 15.1% coding (45/423 nt) paaI hydroxyphenylacetyl‑CoA thioesterase
?NC_000913 1460544 = 80 (0.950)coding (74/423 nt) paaI hydroxyphenylacetyl‑CoA thioesterase

Only 100 of 127 total aligned reads displayed.

AACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCAT  >  NC_000913/1460417‑1460614
                                                                                                  |                                                                                                   
aaatagctgcccgccgtggcaactttgatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCg                                                                                                    <  1:2325242‑M1/2‑1 (MQ=255)
aaatagctgcccgccgtggcaactttgatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCg                                                                                                    >  2:1702292‑M1/99‑100 (MQ=255)
  atagctgcccgccgtggcaactttgatgtccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtc                                                                                                     >  1:1272584‑M1/97‑97 (MQ=255)
  atagctgcccgccgtggcaactttgatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGAt                                                                                                  >  2:1136897‑M1/97‑100 (MQ=255)
   gCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATg                                                                                                 <  1:1019051/100‑1 (MQ=255)
   gCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATg                                                                                                 >  1:1281875/1‑100 (MQ=255)
    cTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGAACTGAAAAAAAGCCCATGCAATGTATGAGAACGATGc                                                                                                >  2:15885/1‑100 (MQ=255)
     tATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGcc                                                                                               >  2:2155104/1‑100 (MQ=255)
     gctgcccgccgtggcaactttgatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGcc                                                                                               <  1:2284721‑M1/7‑1 (MQ=255)
     gctgcccgccgtggcaactttgatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGcc                                                                                               <  1:1297260‑M1/7‑1 (MQ=255)
          cccATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTgcgc                                                                                          <  1:1706504/100‑1 (MQ=255)
          cccATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTgcgc                                                                                          >  2:1056726/1‑100 (MQ=255)
            cATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCa                                                                                        >  1:1360184/1‑100 (MQ=255)
               gTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAg                                                                                     <  2:2444961/100‑1 (MQ=255)
               gTTCATTGCTGCGCCAACGGGCGCTTCGGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCa                                                                                        <  1:2112168/97‑1 (MQ=255)
                ttCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAgc                                                                                    <  1:1708279/100‑1 (MQ=255)
                   aTTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCt                                                                                 <  2:1003249/100‑1 (MQ=255)
                    ttGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCtt                                                                                <  2:24454/100‑1 (MQ=255)
                     tgctgcGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGACTGGCAAAATGCAAATGCAATATATGAGAACGCTGCATGCGCCAAAGCGCTTg                                                                               <  1:860903/100‑1 (MQ=255)
                      gctgcGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTgg                                                                              >  1:389165/1‑100 (MQ=255)
                      gctgcGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTgg                                                                              >  2:1987784/1‑100 (MQ=255)
                      gctgcGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGACATAAGGCCTGGCAAAATGCCCATGTAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTgg                                                                              >  1:1377556/1‑100 (MQ=255)
                       ctgcGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGc                                                                             >  2:1104198/1‑100 (MQ=255)
                         gcgcCAACGGGCGCTTCTGGCGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCGAAAGCGCTTGGCAt                                                                           >  1:1578132/1‑100 (MQ=255)
                         gcgcCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCAt                                                                           >  2:539566/1‑100 (MQ=255)
                          gatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATc                                                                          >  2:686422‑M1/73‑100 (MQ=255)
                          gatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATc                                                                          >  1:327312‑M1/73‑100 (MQ=255)
                          gatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATc                                                                          >  2:2325256‑M1/73‑100 (MQ=255)
                          gatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATc                                                                          >  1:1417308‑M1/73‑100 (MQ=255)
                          gatgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCCCCAAAGCGCTTGGCATc                                                                          >  1:684078‑M1/73‑100 (MQ=255)
                           gcCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCg                                                                         >  1:1539562/1‑100 (MQ=255)
                           atgaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCg                                                                         >  2:34612‑M1/72‑100 (MQ=255)
                             gaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGAc                                                                       >  1:1892362‑M1/70‑100 (MQ=255)
                             gaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGAc                                                                       >  1:566054‑M1/70‑100 (MQ=255)
                             cAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGAc                                                                       <  2:1595699/100‑1 (MQ=255)
                              accgttaagcatttgtgcagtgacggtcagggtcactacagcaaggccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGACa                                                                      >  1:296728‑M1/69‑100 (MQ=255)
                              aaCGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACa                                                                      <  1:2496516/100‑1 (MQ=255)
                               cctgtcgcTTGTGGAGAGAGGATATGAGCCATAAGGCCTGGCTAAATGCACATGCCATGTATGAGAACGATTCCTGCGCCAAAGCGCTTGGCATCg                                                                         <  1:1134863/91‑1 (MQ=255)
                               ccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGACAt                                                                     >  1:1255837‑M1/68‑100 (MQ=255)
                                 gttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGACATTa                                                                   >  1:453014‑M1/66‑100 (MQ=255)
                                 gggCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTa                                                                   <  2:81797/100‑1 (MQ=255)
                                    cgcTTCTGGAGAGCGGTTATGTGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtct                                                                <  2:924499/100‑1 (MQ=255)
                                     gcTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAACTGCCCATGCAATGTATGAGAACGATACCTGCGCCAAAGCGCTTGGCATCGACCTTAtctc                                                               <  1:1024626/100‑1 (MQ=255)
                                     gcTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCGCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                               <  1:1306873/100‑1 (MQ=255)
                                     gcTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                               <  2:1915754/100‑1 (MQ=255)
                                     gcTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                               <  2:883660/100‑1 (MQ=255)
                                     gcTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                               <  1:1473/100‑1 (MQ=255)
                                     agcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                               >  2:2495765‑M1/62‑100 (MQ=255)
                                      cTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                               >  2:745929/1‑99 (MQ=255)
                                          tGGAGAGCGGTTATGAGTCATGAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATgg                                                          <  2:441575/100‑1 (MQ=255)
                                           tcttccgatctATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                         <  2:631385/90‑1 (MQ=255)
                                           ggATAGCGGTTATGAGTAATAAGGCCTGGAAAAATGCCCATGTAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                         <  1:1636000/100‑1 (MQ=255)
                                           ggAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                         >  2:2205222/1‑100 (MQ=255)
                                           ggAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                         >  2:1941762/1‑100 (MQ=255)
                                           ggAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                         >  2:342356/1‑100 (MQ=255)
                                           ggAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAAGGGa                                                         >  2:296661/1‑100 (MQ=255)
                                             agagCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATg                                                       >  1:31609/1‑100 (MQ=255)
                                                gCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAg                                                    >  2:458054/1‑100 (MQ=255)
                                                 cGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAgg                                                   <  1:485594/100‑1 (MQ=255)
                                                  ggTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGc                                                  >  2:2081764/1‑100 (MQ=255)
                                                  ggTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGc                                                  >  1:1274569/1‑100 (MQ=255)
                                                   gTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAgg                                                   <  1:2261228/98‑1 (MQ=255)
                                                   gTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGc                                                  <  1:464646/99‑1 (MQ=255)
                                                   gTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCt                                                 >  1:2111739/1‑100 (MQ=255)
                                                     tATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCttt                                               >  1:1807486/1‑100 (MQ=255)
                                                     tATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCttt                                               >  1:924825/1‑100 (MQ=255)
                                                       tGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGc                                             <  2:1176513/100‑1 (MQ=255)
                                                        gAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCt                                            >  2:1878184/1‑100 (MQ=255)
                                                         aGTGATGAGGCCTGTCAAAATGGCCATGCAATGTATGAGAACGATGCCTGCGCAAAAGCGCTTGGCCTTGTCATTAGCTCAATGGATGAAGGCTTTGCTg                                           <  1:885378/100‑1 (MQ=255)
                                                          gTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGt                                          <  1:2205207/100‑1 (MQ=255)
                                                            cATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAg                                        <  2:1539571/100‑1 (MQ=255)
                                                            cATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAg                                        >  2:1799534/1‑100 (MQ=255)
                                                             aTAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGt                                       >  2:2299983/1‑100 (MQ=255)
                                                              tAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTg                                      <  2:615034/100‑1 (MQ=255)
                                                              tAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTg                                      >  1:392957/1‑100 (MQ=255)
                                                               aaGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTg                                      <  2:2371702/99‑1 (MQ=255)
                                                                 ggCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGAcc                                   <  1:1646549/100‑1 (MQ=255)
                                                                   ccTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCAt                                 >  2:1373803/1‑100 (MQ=255)
                                                                    cTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCAt                                 <  1:1116622/99‑1 (MQ=255)
                                                                    cTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATg                                >  1:2437002/1‑100 (MQ=255)
                                                                      ggCAAAATGCCCATGCAATGTATTAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCACTGGATGAAGGCTTTGCTGTAGTGACCATGAc                              >  1:395851/1‑100 (MQ=255)
                                                                       gCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGAcc                             >  1:1404964/1‑100 (MQ=255)
                                                                        cAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCg                            >  2:1170097/1‑100 (MQ=255)
                                                                           aaTGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCa                         <  2:108364/100‑1 (MQ=255)
                                                                            aTGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGAGCGTCAc                        <  2:335153/100‑1 (MQ=255)
                                                                             tGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACt                       <  2:538140/100‑1 (MQ=255)
                                                                                  aTGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGcaca                  <  1:2010112/100‑1 (MQ=255)
                                                                                        tGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCt            <  2:1404972/100‑1 (MQ=255)
                                                                                         gTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCCTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCtt           >  1:62072/1‑100 (MQ=255)
                                                                                           aTGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTaa         >  1:2113275/1‑100 (MQ=255)
                                                                                            tGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAAc        <  2:1155304/100‑1 (MQ=255)
                                                                                            tGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAAc        >  1:381427/1‑100 (MQ=255)
                                                                                             gagaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACg       <  1:2485781/100‑1 (MQ=255)
                                                                                             gagaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACg       <  1:2536755/100‑1 (MQ=255)
                                                                                              agaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACgg      <  1:2155090/100‑1 (MQ=255)
                                                                                              agaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACgg      <  1:1545958/100‑1 (MQ=255)
                                                                                              agaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACgg      >  1:1397007/1‑100 (MQ=255)
                                                                                              agaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACgg      <  1:4494/100‑1 (MQ=255)
                                                                                                aaCGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtc    <  2:230238/100‑1 (MQ=255)
                                                                                                  CGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcat  <  2:1381127‑M1/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
AACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCAT  >  NC_000913/1460417‑1460614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.