New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1460515 =96 (1.050)15 (0.180) 9/164 NT 15.1% coding (45/423 nt) paaI hydroxyphenylacetyl‑CoA thioesterase
?NC_000913 1460544 = 80 (0.950)coding (74/423 nt) paaI hydroxyphenylacetyl‑CoA thioesterase

Only 100 of 128 total aligned reads displayed.

CCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGCTATTTTC  >  NC_000913/1460445‑1460643
                                                                                                   |                                                                                                   
ccAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGa                                                                                                     >  1:128328/1‑100 (MQ=255)
 gaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGAc                                                                                                    >  1:1892362‑M1/70‑100 (MQ=255)
 gaccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGAc                                                                                                    >  1:566054‑M1/70‑100 (MQ=255)
 cAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGAc                                                                                                    <  2:1595699/100‑1 (MQ=255)
  aaCGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACa                                                                                                   <  1:2496516/100‑1 (MQ=255)
   ccgttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGACAt                                                                                                  >  1:1255837‑M1/68‑100 (MQ=255)
     gttaagcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGACATTa                                                                                                >  1:453014‑M1/66‑100 (MQ=255)
     gggCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTa                                                                                                <  2:81797/100‑1 (MQ=255)
        cgcTTCTGGAGAGCGGTTATGTGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtct                                                                                             <  2:924499/100‑1 (MQ=255)
        aagcatttgttcagtgacggtcatggttactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtct                                                                                             >  1:2338226‑M1/63‑100 (MQ=255)
         gcTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAACTGCCCATGCAATGTATGAGAACGATACCTGCGCCAAAGCGCTTGGCATCGACCTTAtctc                                                                                            <  1:1024626/100‑1 (MQ=255)
         gcTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                                                            <  1:1473/100‑1 (MQ=255)
         gcTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                                                            <  2:1915754/100‑1 (MQ=255)
         gcTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                                                            <  2:883660/100‑1 (MQ=255)
         agcatttgtgcagtgacggtcatggtcactacagcaaagccttcatccattgagataatgtCGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                                                            >  2:2495765‑M1/62‑100 (MQ=255)
          cTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTAtctc                                                                                            >  2:745929/1‑99 (MQ=255)
          cTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCa                                                                                           >  1:144967/1‑100 (MQ=255)
             cTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATg                                                                                        >  1:1760792/1‑100 (MQ=255)
              tGGAGAGCGGTTCTGAGTCATAAGGTCTGGCAAATTGAACATGCAATGTATGAGAACGATGCCTGCGCGCAAGCACTTGGCATCGATGTCATGTCAAt                                                                                         >  1:2187761/1‑98 (MQ=255)
               tcttccgatctATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                                                      <  2:631385/90‑1 (MQ=255)
               ggATAGCGGTTATGAGTAATAAGGCCTGGAAAAATGCCCATGTAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                                                      <  1:1636000/100‑1 (MQ=255)
               ggAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                                                      >  2:2205222/1‑100 (MQ=255)
               ggAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                                                      >  2:342356/1‑100 (MQ=255)
               ggAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGa                                                                                      <  2:605908/100‑1 (MQ=255)
               ggAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAAGGGa                                                                                      >  2:296661/1‑100 (MQ=255)
                 agagCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATg                                                                                    >  1:31609/1‑100 (MQ=255)
                    gCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAg                                                                                 >  2:458054/1‑100 (MQ=255)
                     cGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAgg                                                                                <  1:485594/100‑1 (MQ=255)
                     cGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAgg                                                                                <  1:1184321/100‑1 (MQ=255)
                      ggTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGc                                                                               >  1:1274569/1‑100 (MQ=255)
                      ggTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGc                                                                               >  2:2081764/1‑100 (MQ=255)
                       gTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAgg                                                                                <  1:2261228/98‑1 (MQ=255)
                       gTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCt                                                                              >  1:2111739/1‑100 (MQ=255)
                       gTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCt                                                                              <  1:289813/100‑1 (MQ=255)
                         tATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCttt                                                                            >  1:924825/1‑100 (MQ=255)
                           tGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGc                                                                          <  2:1176513/100‑1 (MQ=255)
                            gAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCt                                                                         >  2:1878184/1‑100 (MQ=255)
                             aGTGATGAGGCCTGTCAAAATGGCCATGCAATGTATGAGAACGATGCCTGCGCAAAAGCGCTTGGCCTTGTCATTAGCTCAATGGATGAAGGCTTTGCTg                                                                        <  1:885378/100‑1 (MQ=255)
                                cATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAg                                                                     <  2:1539571/100‑1 (MQ=255)
                                  tAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTg                                                                   >  1:392957/1‑100 (MQ=255)
                                   aaGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTg                                                                   <  2:2371702/99‑1 (MQ=255)
                                    aGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGAc                                                                 >  2:129346/1‑100 (MQ=255)
                                     ggCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGAcc                                                                <  1:1646549/100‑1 (MQ=255)
                                      gCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCa                                                               <  2:392959/100‑1 (MQ=255)
                                       ccTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCAt                                                              >  2:1373803/1‑100 (MQ=255)
                                        cTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCAt                                                              <  1:1116622/99‑1 (MQ=255)
                                          ggCAAAATGCCCATGCAATGTATTAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCACTGGATGAAGGCTTTGCTGTAGTGACCATGAc                                                           >  1:395851/1‑100 (MQ=255)
                                           gCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGAcc                                                          <  2:1833180/100‑1 (MQ=255)
                                            cAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCg                                                         >  2:1170097/1‑100 (MQ=255)
                                            cAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTACTGTAGTGACCATGACCg                                                         >  2:1138841/1‑100 (MQ=255)
                                                aTGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGAGCGTCAc                                                     <  2:335153/100‑1 (MQ=255)
                                                 tGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACt                                                    <  2:538140/100‑1 (MQ=255)
                                                     cATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCGTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGcac                                                >  1:1381983/1‑100 (MQ=255)
                                                      aTGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGcaca                                               <  1:2010112/100‑1 (MQ=255)
                                                            tGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCt                                         <  2:1404972/100‑1 (MQ=255)
                                                            gagataatgtcgatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCt                                         >  2:2495765‑M2/40‑100 (MQ=255)
                                                             agataatgtcgatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTAACCATGACCGTCACTGAACAAATGCtt                                        >  1:2338226‑M2/39‑100 (MQ=255)
                                                               aTGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTaa                                      >  1:2113275/1‑100 (MQ=255)
                                                                taatgtcgatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAAc                                     >  1:453014‑M2/36‑100 (MQ=255)
                                                                tGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAAc                                     >  1:381427/1‑100 (MQ=255)
                                                                 gagaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACg                                    <  1:2485781/100‑1 (MQ=255)
                                                                 gagaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACg                                    <  1:2536755/100‑1 (MQ=255)
                                                                 aatgtcgatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACg                                    >  1:36290‑M2/35‑100 (MQ=255)
                                                                  agaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACgg                                   <  1:1545958/100‑1 (MQ=255)
                                                                  agaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACgg                                   >  1:1397007/1‑100 (MQ=255)
                                                                  agaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACgg                                   <  1:2155090/100‑1 (MQ=255)
                                                                  agaACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACgg                                   <  1:4494/100‑1 (MQ=255)
                                                                   tgtcgatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCCTTGCTGTAGTGACCCTGACCGTCACTGCACAAATGCTTAACGGt                                  >  1:296728‑M2/33‑100 (MQ=255)
                                                                    gtcgatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtc                                 >  1:1892362‑M2/32‑100 (MQ=255)
                                                                    gtcgatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtc                                 >  1:566054‑M2/32‑100 (MQ=255)
                                                                    aaCGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtc                                 <  2:230238/100‑1 (MQ=255)
                                                                      cgatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcat                               >  2:34612‑M2/30‑100 (MQ=255)
                                                                       gatgccaagcgctttggggcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcatc                              >  1:684078‑M2/29‑100 (MQ=255)
                                                                       gatgccaagcgctttggcgcaggcatcgACATTATCTTAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcatc                              >  1:518675‑M2/29‑100 (MQ=255)
                                                                       gatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcatc                              >  2:686422‑M2/29‑100 (MQ=255)
                                                                       gatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcatc                              >  1:327312‑M2/29‑100 (MQ=255)
                                                                       gatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcatc                              >  1:1417308‑M2/29‑100 (MQ=255)
                                                                       gatgccaagcgctttggcgcaggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcatc                              >  2:2325256‑M2/29‑100 (MQ=255)
                                                                       GATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcatc                              >  2:2033254‑M1/1‑100 (MQ=255)
                                                                       GATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGtcatc                              <  1:1437978‑M1/100‑1 (MQ=255)
                                                                          GCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCaaa                           <  2:1631896‑M1/100‑1 (MQ=255)
                                                                           CCTGCGCCAAAGCGTTTGGCATCGACATTATCTCAATGTATTAATGCTTTGCTGTAGTGACCATGACCTTCACTGCACAAATGCTTAACGGTCATCAAAg                          >  2:671144‑M1/1‑100 (MQ=255)
                                                                           CCTGCGCCAAAGCGCTTGGCCTCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCAtcaagg                          <  1:1576064‑M1/100‑3 (MQ=255)
                                                                           CCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAg                          >  2:1437986‑M1/1‑100 (MQ=255)
                                                                               cgcCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGc                      <  2:1115423/100‑1 (MQ=255)
                                                                                  cAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCAc                   >  2:2302454/1‑100 (MQ=255)
                                                                                        gcTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCggg             >  2:2284736/1‑100 (MQ=255)
                                                                                        gcTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCggg             >  1:1307236/1‑100 (MQ=255)
                                                                                         cTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGc            >  1:223578/1‑100 (MQ=255)
                                                                                          ttGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCa           <  2:1584953/100‑1 (MQ=255)
                                                                                           tGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAg          <  1:148469/100‑1 (MQ=255)
                                                                                            ggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGc         <  1:2284721‑M2/93‑1 (MQ=255)
                                                                                            ggcatcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGc         <  1:1297260‑M2/93‑1 (MQ=255)
                                                                                               atcgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGCTAt      >  2:1136897‑M2/5‑100 (MQ=255)
                                                                                                 cgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGCTAttt    >  2:1702292‑M2/3‑100 (MQ=255)
                                                                                                 cgACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGCTAttt    <  1:2325242‑M2/98‑1 (MQ=255)
                                                                                                  gACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGACATCAAAGTTGCCACGGCGGGCAGCTAt      >  1:1272584‑M2/2‑97 (MQ=255)
                                                                                                  gACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACGGCACAAATGCGTAGCGGTAATCAAGGTTGGCACGGCGGGTGGCTa       >  1:2229209/1‑96 (MQ=255)
                                                                                                   aCATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGCTATTTTc  >  1:714180/1‑100 (MQ=255)
                                                                                                   aCATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGCTATTTTc  <  1:1734033/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGCTTGGCATCGACATTATCTCAATGGATGAAGGCTTTGCTGTAGTGACCATGACCGTCACTGCACAAATGCTTAACGGTCATCAAAGTTGCCACGGCGGGCAGCTATTTTC  >  NC_000913/1460445‑1460643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.