New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2662534NA (NA)12 (0.150)
+CGTTTGTAG
6/160 NT NA noncoding (226/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 = 3392342 NA (NA)noncoding (267/308 nt) REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences REP245 (repetitive extragenic palindromic) element; contains 7 REP sequences

GTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCC  >  NC_000913/2662440‑2662633
                                                                                              |                                                                                                   
gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGt                                                                                                >  2:407868/1‑100 (MQ=32)
 ttCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTGGATGCGCCTTTTACGTCTTTTCCGCTCTTCGGTTGTGGTCAgtgt                                                                                                >  1:871097/1‑99 (MQ=2)
  tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAg                                                                                              >  2:1907897/1‑100 (MQ=11)
                               cgTCGCATCAGGCAACGGCTGCCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatc                                                                 <  2:913176‑M1/100‑37 (MQ=255)
                                ggcgcATCAGGCAACGGCTGTCGGATGCGGCATAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatca                                                                <  1:218975‑M1/98‑38 (MQ=255)
                                  cGCATCAGGCAATGGCTGCCGGATGTGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcagg                                                              <  2:2080068‑M1/100‑40 (MQ=255)
                                  cGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcagg                                                              <  1:1637742‑M1/100‑40 (MQ=255)
                                  cGCATCAGGCAACGGCTGCCGGATGCGTCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcagg                                                              <  1:603763‑M1/100‑40 (MQ=255)
                                   gCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggc                                                             <  1:1917872‑M1/100‑41 (MQ=255)
                                    cATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggcc                                                            <  2:369386‑M1/100‑42 (MQ=255)
                                    cATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggcc                                                            <  1:1938448‑M1/100‑42 (MQ=255)
                                     aTCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggcct                                                           <  2:1653170‑M1/100‑43 (MQ=255)
                                      tCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcaggccta                                                          <  2:481035‑M1/100‑44 (MQ=255)
                                       cAGGCGACGGCTGCCGGATGCGGCGGAAACGCCTTATCCGACCTAGGGTTAGGTTCcgtttgtaggcctgatgcgacgctgtgcgtcttatcagg                                                              <  1:1716734‑M1/95‑40 (MQ=255)
                                              cGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTa                                                  <  1:660894/100‑1 (MQ=31)
                                                gCTGCCGGAGGCGGCGTAAACGCCTTATCCGACCTACGGTTATGTTCcgtctgtaggactgatgcgacgctgtgcgtcttatcaggcctacaaacggaa                                                 <  1:614873‑M1/99‑53 (MQ=255)
                                                 cTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTc                                               >  2:821631/1‑100 (MQ=35)
                                                 cTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTc                                               >  2:1407728/1‑100 (MQ=35)
                                                  tGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg                                              <  2:2453468/100‑1 (MQ=35)
                                                   gTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg                                             <  1:2251086/100‑1 (MQ=38)
                                                   gTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg                                             >  1:165218/1‑100 (MQ=38)
                                                    tCGGATGCGGAGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGc                                            <  1:1701358/100‑1 (MQ=255)
                                                      ggATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGcc                                           <  1:741075/99‑1 (MQ=40)
                                                      ggATGCGGCGCGAGCGCTTTATCCTGCCGTCGGTTCTGTGCACTGTAGGCCTGATAAGACGCATTACGCGGCGCATCAGGCAACGGCTGTTATTCGGc                                            <  2:2286833/98‑1 (MQ=14)
                                                       gATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCATGCAACGGCTGTTATTCGGCCtt                                         >  1:251802/1‑100 (MQ=255)
                                                        aTGCGGCGTGAACGCCTTATCCGCCCTAGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTg                                        <  1:1338445/100‑1 (MQ=255)
                                                        aTGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTg                                        <  2:2590739/100‑1 (MQ=255)
                                                        aTGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTg                                        <  2:2195706/100‑1 (MQ=255)
                                                         tGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGt                                       >  2:139463/1‑100 (MQ=255)
                                                           cggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa                                     >  2:1199311/1‑100 (MQ=255)
                                                           cggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa                                     <  1:1263680/100‑1 (MQ=255)
                                                            ggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCGTTACGCGTCGCATCAGGCAACGGCTGTCGTTCGGCCTGGTTAc                                    >  1:1650657/1‑100 (MQ=11)
                                                            ggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGttn                                     <  1:2207705/99‑2 (MQ=255)
                                                            ggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAc                                    >  2:1185618/1‑100 (MQ=255)
                                                             gcgTGAACGCCTTATCCGCCCTGCGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                   <  1:808094/100‑1 (MQ=255)
                                                             gcgTGAACGCCTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                   <  1:2313486/100‑1 (MQ=255)
                                                             gcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCCGGCAACGGCTGTTATTCGGCCTTGTTAcc                                   >  1:570093/1‑100 (MQ=255)
                                                             gcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                   <  2:874960/100‑1 (MQ=255)
                                                             gcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                   <  2:653968/100‑1 (MQ=255)
                                                              cttGAACGCCTTATCCGCCCTACGTTTCTGTTCACTGTAGGCCTGTTAATACTCATTCCGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCt                                  <  1:1526210/98‑1 (MQ=17)
                                                               gTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCtt                                 <  2:2421497/100‑1 (MQ=255)
                                                               gTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCtt                                 <  2:656023/100‑1 (MQ=255)
                                                                ttcaCGCCGCATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCttt                                >  2:720195/4‑100 (MQ=255)
                                                                 gAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa                               >  1:164053/1‑100 (MQ=255)
                                                                  aaCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt                              >  2:450124/1‑100 (MQ=255)
                                                                  aaCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt                              <  1:674824/100‑1 (MQ=255)
                                                                    cGCCTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc                            <  1:1677448/100‑1 (MQ=255)
                                                                    cGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc                            <  1:1497941/100‑1 (MQ=255)
                                                                    cGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc                            <  2:361001/100‑1 (MQ=255)
                                                                    cGCCTTATCCGACCTACGGTGCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc                            <  1:716480/100‑1 (MQ=255)
                                                                     gCCTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCGTTATTct                           <  2:482477/100‑1 (MQ=255)
                                                                     gCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTct                           <  1:320718/100‑1 (MQ=255)
                                                                      ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                          >  1:1779002/1‑100 (MQ=255)
                                                                      ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTATTctgc                         <  1:794278/100‑1 (MQ=255)
                                                                      ccTTATCCCACCCACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt                              <  1:408817/96‑1 (MQ=255)
                                                                       cTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgc                         <  1:1376680/100‑1 (MQ=255)
                                                                        ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                        <  2:397395/100‑1 (MQ=255)
                                                                        ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                        >  2:660834/1‑100 (MQ=255)
                                                                         tATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgctg                       <  2:1065324/100‑1 (MQ=255)
                                                                          aTCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                        <  1:1333387/98‑1 (MQ=255)
                                                                          aTCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCtgctgc                      <  2:2400494/100‑1 (MQ=255)
                                                                          aTCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCtgctgc                      <  2:903873/100‑1 (MQ=255)
                                                                            ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTc                    >  2:684761/1‑100 (MQ=255)
                                                                             cGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCCTCAGGCAACCGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTc                    >  1:677845/1‑99 (MQ=255)
                                                                             cGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCa                   <  1:139462/100‑1 (MQ=255)
                                                                              gACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCaa                  >  2:1928766/1‑100 (MQ=255)
                                                                                ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                <  1:2060140/100‑1 (MQ=255)
                                                                                ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                <  2:1650666/100‑1 (MQ=255)
                                                                                ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                >  1:279475/1‑100 (MQ=255)
                                                                                ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                <  2:822430/100‑1 (MQ=255)
                                                                                  tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa              >  2:1960494/1‑100 (MQ=255)
                                                                                    cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg            <  1:2317071/100‑1 (MQ=255)
                                                                                    cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg            <  2:1414942/100‑1 (MQ=255)
                                                                                     ggTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGc           <  2:1066464/100‑1 (MQ=255)
                                                                                      gTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc          <  1:740333/100‑1 (MQ=255)
                                                                                       ttCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCa         <  1:89479/100‑1 (MQ=255)
                                                                                        tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg        <  1:578205/100‑1 (MQ=255)
                                                                                         cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa       >  1:1945358/1‑100 (MQ=255)
                                                                                          tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGaa      >  2:444947/1‑100 (MQ=255)
                                                                                           gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt     >  2:863201/1‑100 (MQ=255)
                                                                                           gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt     <  2:1955143/100‑1 (MQ=255)
                                                                                           gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt     <  2:403916/100‑1 (MQ=255)
                                                                                           gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt     >  2:1432500/1‑100 (MQ=255)
                                                                                           gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt     >  2:1518294/1‑100 (MQ=255)
                                                                                             tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc   >  1:2097291/1‑100 (MQ=255)
                                                                                             tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc   >  1:71836/1‑100 (MQ=255)
                                                                                              cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc  >  2:631047/1‑100 (MQ=255)
                                                                                              |                                                                                                   
GTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCC  >  NC_000913/2662440‑2662633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.