| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3255217 = | NA (NA) | 8 (0.090) | 5/164 | NT | NA | noncoding (1/103 nt) | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 3255247 = | NA (NA) | noncoding (31/103 nt) | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 171 total aligned reads displayed.
TTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCC > NC_000913/3255120‑3255316 | aaacgccaggttttggggatcgtgccggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCg > 1:2189981‑M1/97‑100 (MQ=255) ttGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGG < 2:561910‑M1/100‑1 (MQ=255) ggCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGAT > 2:1587572‑M1/1‑100 (MQ=255) cgccaggttttggggatcgtgccggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGAt > 2:936043‑M1/94‑100 (MQ=255) ccaggttttggtgatcgtgccggatgtgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGAt > 1:11115‑M1/92‑98 (MQ=255) cTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgc > 2:270959/1‑100 (MQ=255) tATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcg < 2:314041/100‑1 (MQ=255) aaGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGa > 2:423835/1‑100 (MQ=255) gagaTGTTGAGCGAGCTGGAAGCTATCGGCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGaaa < 1:403607/100‑1 (MQ=255) gaTGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAAc > 2:2246431/1‑100 (MQ=255) tGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGc > 2:1192778/1‑100 (MQ=255) gTTGAGGGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc < 1:2025598/100‑1 (MQ=255) gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc > 2:342660/1‑100 (MQ=255) gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc > 1:288993/1‑100 (MQ=255) gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc < 1:2118171/100‑1 (MQ=255) ttGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCt < 2:743200/100‑1 (MQ=255) tGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCtt < 1:974940/100‑1 (MQ=255) gagcgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTa < 1:1019339‑M2/100‑2 (MQ=255) agcgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTat < 1:2299488‑M2/100‑3 (MQ=255) gcgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTatc < 1:2130130‑M2/100‑4 (MQ=255) gccggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGATGCGGCGAAAACGCCTTATcc > 1:1797432‑M1/74‑100 (MQ=255) cgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTatcc < 2:761356‑M2/100‑5 (MQ=255) ccggatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGATGCGGCGAAAACGCCTTATCCg > 1:1495945‑M1/73‑100 (MQ=255) gcTGGAAGCTATCGTCGCGGATGCTGAACCGCGGTGAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATaaggcgttttcgccgcagccggc < 1:1227539‑M1/100‑24 (MQ=255) gcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATaaggcgttttcgccgcatccggc < 1:2377570‑M1/100‑24 (MQ=255) gcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTatccggc < 2:1966502‑M2/100‑8 (MQ=255) gcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTatccggc > 2:51405‑M2/1‑93 (MQ=255) tGGAAGCCATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCt < 1:704340/100‑1 (MQ=255) ggAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa > 2:1500201/1‑100 (MQ=255) ggAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa > 1:1524490/1‑100 (MQ=255) gAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTAc < 1:1109937/100‑1 (MQ=255) gAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTAc < 1:2417547/100‑1 (MQ=255) gAAGCGATCGTCGCGGATGCTGAAGCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACCGGTTGCCGGATaaggcgttttcgctgcatccggcaacc < 1:1598442‑M1/100‑28 (MQ=255) gCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACaaa > 2:60531/1‑100 (MQ=255) cTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACaaaa > 1:306307/1‑100 (MQ=255) aTCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATc > 1:1159693/1‑100 (MQ=255) tcgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATcc < 1:2053768/100‑1 (MQ=255) cgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca < 1:2011739/100‑1 (MQ=255) cgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca > 2:305858/1‑100 (MQ=255) gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaa > 1:1050610/1‑100 (MQ=255) gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaa > 2:2471533/1‑100 (MQ=255) tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac < 2:1612623/100‑1 (MQ=255) tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac < 2:700718/100‑1 (MQ=255) cgcgGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaaca < 2:1155746/100‑1 (MQ=255) cgcgGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac < 2:400111/99‑1 (MQ=255) gcgGATGCTGAAACGCGTTTAGCCGAGGATGAACCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAGAATCcaacaa > 1:1696926/1‑100 (MQ=255) cgGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCaacaac < 2:1788186/100‑1 (MQ=255) gATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACAt < 2:1965214/100‑1 (MQ=255) gATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACAt < 1:1134194/100‑1 (MQ=255) cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc < 2:2299502/100‑1 (MQ=255) cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc > 2:1124949/1‑100 (MQ=255) cTGAAACGCGTTTAGCCGAGGAGGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACCTTAAc > 2:665504/1‑100 (MQ=255) tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACg < 1:60530/100‑1 (MQ=255) aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAt < 1:1244286/100‑1 (MQ=255) gcgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTaa < 2:2440038/100‑1 (MQ=255) gcgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTaa < 1:197901/100‑1 (MQ=255) gTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAaac < 1:2471515/100‑1 (MQ=255) gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc < 2:482251/100‑1 (MQ=255) gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc > 1:345438/1‑100 (MQ=255) gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc > 2:1025373/1‑100 (MQ=255) gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGACCTACATAATCCAACAACATTAACGATTTAAACAAcc > 1:191943/1‑99 (MQ=255) ccgatcttGAAGCTACCGCGTAAAGACAGGTTGCCAGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCg < 1:137498/93‑1 (MQ=38) ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCg < 1:1898134/100‑1 (MQ=255) cGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGt > 2:365444/1‑100 (MQ=255) cGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGt > 2:1046088/1‑100 (MQ=255) aGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAg < 1:921090/100‑1 (MQ=255) ggATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAgg > 2:2039856/1‑100 (MQ=255) tGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCg > 1:914313/1‑100 (MQ=255) tGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCg > 2:2120901/1‑100 (MQ=255) tGAAGCTACCGCGTAAAGACAGGTTGCCAGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCgagatcgg > 2:137499/1‑93 (MQ=38) aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGAc < 2:371945/100‑1 (MQ=255) gCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACa > 2:2017815/1‑100 (MQ=255) ccGCGTAAAGACAGGTGGCCGGATGCGGCGAACACGCCTTCTCCGGCCGACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAg < 1:631146/98‑1 (MQ=39) gcgTAAAGACAGGTTGCCGGATGCGGCGACAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATCACACACCCCCTAGCCCGCACAAgctcc > 1:1007326/1‑96 (MQ=25) gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc > 2:25087/1‑100 (MQ=255) gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc > 2:2536591/1‑100 (MQ=255) gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc < 1:583729/100‑1 (MQ=255) cgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTatccggcaacctgtctttacgcggtagcttcatcctcggctaaacgcgtttcagcatccgcga < 2:847807‑M2/100‑64 (MQ=255) tAAAGACGGGTGGCCGGATGGGGCGGAAGCGCCTGATCCGGCCTACGGAATCCAACAGCATGAGCGGATTAAACAACCCGTAGGCCGGACAAGAGGCGcc < 1:117751/100‑1 (MQ=255) tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc < 2:2008522/100‑1 (MQ=255) tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc < 1:82055/100‑1 (MQ=255) tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc > 1:2249204/1‑100 (MQ=255) tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc < 1:2059010/100‑1 (MQ=255) tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc > 2:1098156/1‑100 (MQ=255) aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg < 2:1335773/100‑1 (MQ=255) aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg < 2:1783576/100‑1 (MQ=255) aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg < 1:2267559/100‑1 (MQ=255) aGACAGGTTGCCGGATGCGGCGAAAACGCCTTatccggcaacctgtctttacgcggtagcttcatcctcggctaaacgcgtttcagcatccgcgacgata > 1:847804‑M2/1‑32 (MQ=255) aGACAGGTGGCCGGATGCGGCGAAAAGGCCTTATCCGGCCTACAAAAGCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgc < 2:2157026/100‑1 (MQ=255) gACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgca < 2:1543544/100‑1 (MQ=255) gACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgca < 2:1056220/100‑1 (MQ=255) cAGGTTGCCGGGTGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCACCACCATTCACGAATTAAACAAACCGCAGGCCGGACAACATGCGCCAgcatc > 1:664954/1‑100 (MQ=25) aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcg < 2:2536268/100‑1 (MQ=255) ggtgGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAAGCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcg > 1:617332‑M1/5‑99 (MQ=255) ggTTGCCGGATGCGGCGAAAACGCCTTatccggcaacctgtctttacgcggtagcttcatcctcggctaaacgcgtttcagcatccgcgacgatagcttc < 2:360849‑M2/100‑74 (MQ=255) ggTTGCCGGATGCAGCGAAAACGCCTTatccggcaaccggtctttacgcggtagcttcatcctcggctaaacgcgcttcagcatccgcgacgatcgcttc < 1:1598442‑M2/100‑74 (MQ=255) gTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgca > 1:747676/1‑100 (MQ=255) gTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgca < 2:1082441/100‑1 (MQ=255) gCCGGATGCGGCGAAAACGCCTTatccggcaacctgtctttacgcggtagcttcatcctcggctaaacgcgtttcagcatccgcgacgatagcttccagc < 1:2521387‑M2/100‑78 (MQ=255) GCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATcc < 1:402160‑M1/100‑1 (MQ=255) | TTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCC > NC_000913/3255120‑3255316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |