BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3255217 =	NA (NA)	8 (0.090)	5/164	NT	NA	noncoding (1/103 nt)	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3255247 =	NA (NA)	8 (0.090)	5/164	NT	NA	noncoding (31/103 nt)	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 149 total aligned reads displayed.

CTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATC  >  NC_000913/3255148‑3255345

gatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                                                                    >  2:1497085‑M1/70‑100 (MQ=255)

cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                                                                    <  2:1069478/100‑1 (MQ=255)

 tGGAAGCCATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCt                                                                                                   <  1:704340/100‑1 (MQ=255)

  tgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgtttgattttgtagGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa                                                                                                  >  1:345817‑M1/68‑100 (MQ=255)

  tgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa                                                                                                  >  1:792937‑M1/68‑100 (MQ=255)

  ggAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa                                                                                                  >  2:1500201/1‑100 (MQ=255)

  ggAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa                                                                                                  >  1:1524490/1‑100 (MQ=255)

   gAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTAc                                                                                                 <  1:2417547/100‑1 (MQ=255)

   gAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTAc                                                                                                 <  1:1109937/100‑1 (MQ=255)

    cgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggcttttgtaggccggataaggcgttttcgccgcatccggccacc                                                                                                 >  1:617332‑M2/96‑96 (MQ=255)

      gCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACaaa                                                                                              >  2:202868/1‑100 (MQ=255)

       cTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACaaaa                                                                                             >  1:306307/1‑100 (MQ=255)

        tATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAAt                                                                                            <  2:2469201/100‑1 (MQ=255)

         aTCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATc                                                                                           >  1:1159693/1‑100 (MQ=255)

         aTCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATc                                                                                           <  1:2046232/100‑1 (MQ=255)

           cgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                                                                                         <  1:2011739/100‑1 (MQ=255)

           cgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                                                                                         >  2:305858/1‑100 (MQ=255)

            gtcgCGGTTGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTGAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATcc                                                                                          >  1:313899/1‑98 (MQ=255)

            gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaa                                                                                        >  1:1050610/1‑100 (MQ=255)

             tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                                                                                       <  2:1612623/100‑1 (MQ=255)

             tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                                                                                       <  2:700718/100‑1 (MQ=255)

             tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                                                                                       <  2:1086353/100‑1 (MQ=255)

              cgcgGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                                                                                       <  2:400111/99‑1 (MQ=255)

               gcgGATGCTGAAACGCGTTTAGCCGAGGATGAACCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAGAATCcaacaa                                                                                     >  1:1696926/1‑100 (MQ=255)

                    tGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTa                                                                                >  2:1790981/1‑100 (MQ=255)

                    tGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTa                                                                                >  2:515392/1‑100 (MQ=255)

                      cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc                                                                              <  2:2299502/100‑1 (MQ=255)

                      cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc                                                                              >  2:1124949/1‑100 (MQ=255)

                      cTGAAACGCGTTTAGCCGAGGAGGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACCTTAAc                                                                              >  2:665504/1‑100 (MQ=255)

                       tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACg                                                                             <  1:1977762/100‑1 (MQ=255)

                       tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACg                                                                             <  1:60530/100‑1 (MQ=255)

                        gAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGa                                                                            <  2:170326/100‑1 (MQ=255)

                          aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAt                                                                          >  1:940648/1‑100 (MQ=255)

                          aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAt                                                                          <  2:2543680/100‑1 (MQ=255)

                          aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAt                                                                          <  1:1244286/100‑1 (MQ=255)

                           aCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAtt                                                                         >  2:2534755/1‑100 (MQ=255)

                             gcgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTaa                                                                       <  2:2440038/100‑1 (MQ=255)

                             gcgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTaa                                                                       <  1:197901/100‑1 (MQ=255)

                               gTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGTTTGCCGGATGCGGCAAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAaac                                                                     <  1:606842/100‑1 (MQ=255)

                                   aGCCTAGGATGAACCTAGCGCGTAAAGACAGCTTGCGAGATGCGGCGAAAACGGCTTATCCGGCCTACAAAATCCAACAACATTAACTAATTAATCAAcc                                                                 <  1:1146872/100‑1 (MQ=25)

                                   aGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAcc                                                                 <  2:403923/100‑1 (MQ=255)

                                    gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                                                                >  1:1722984/1‑100 (MQ=255)

                                    gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                                                                >  1:345438/1‑100 (MQ=255)

                                    gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                                                                >  1:2132234/1‑100 (MQ=255)

                                    gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                                                                >  2:1025373/1‑100 (MQ=255)

                                     ccgatcttGAAGCTACCGCGTAAAGACAGGTTGCCAGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCg                                                               <  1:137498/93‑1 (MQ=38)

                                     ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCg                                                               <  1:1898134/100‑1 (MQ=255)

                                      cGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGt                                                              >  2:1046088/1‑100 (MQ=255)

                                         ggATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAgg                                                           >  2:2039856/1‑100 (MQ=255)

                                         ggATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAgg                                                           >  2:228738/1‑100 (MQ=255)

                                            tGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCg                                                        >  1:914313/1‑100 (MQ=255)

                                            tGAAGCTACCGCGTAAAGACAGGTTGCCAGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCgagatcgg                                                        >  2:137499/1‑93 (MQ=38)

                                               aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGAc                                                     <  2:371945/100‑1 (MQ=255)

                                                 cTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACaa                                                   <  1:185951/100‑1 (MQ=255)

                                                 cTACCGCGTAAAGACAGGTTGCCGGATGCGGCAAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACa                                                    <  1:848220/99‑1 (MQ=255)

                                                  tACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAg                                                  >  1:1021085/1‑100 (MQ=255)

                                                    ccGCGTAAAGACAGGTGGCCGGATGCGGCGAACACGCCTTCTCCGGCCGACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAg                                                  <  1:631146/98‑1 (MQ=39)

                                                      gcgTAAAGACAGGTTGCCGGATGCGGCGACAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATCACACACCCCCTAGCCCGCACAAgctcc                                              >  1:1007326/1‑96 (MQ=25)

                                                      gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc                                              >  2:2536591/1‑100 (MQ=255)

                                                      gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc                                              >  2:25087/1‑100 (MQ=255)

                                                      gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc                                              <  1:583729/100‑1 (MQ=255)

                                                         tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc                                           <  1:2059010/100‑1 (MQ=255)

                                                         tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc                                           >  1:2249204/1‑100 (MQ=255)

                                                         tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc                                           <  2:2008522/100‑1 (MQ=255)

                                                           aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg                                         <  2:1335773/100‑1 (MQ=255)

                                                           aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg                                         <  1:2267559/100‑1 (MQ=255)

                                                           aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg                                         <  2:1783576/100‑1 (MQ=255)

                                                            aGACAGGTGGCCGGATGCGGCGAAAAGGCCTTATCCGGCCTACAAAAGCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgc                                        <  2:2157026/100‑1 (MQ=255)

                                                             gACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgca                                       <  2:1056220/100‑1 (MQ=255)

                                                               cAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatc                                     <  2:1604462/100‑1 (MQ=255)

                                                                aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcg                                    <  2:2012056/100‑1 (MQ=255)

                                                                  taggccggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgca                                  >  1:792937‑M2/34‑100 (MQ=255)

                                                                    ggccggataaggcgttttcgccacatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgcatc                                >  1:1504600‑M2/32‑100 (MQ=255)

                                                                     gccggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATcc                               >  1:2054413‑M2/31‑100 (MQ=255)

                                                                     GCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATcc                               <  1:402160‑M1/100‑1 (MQ=255)

                                                                       cggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCgg                             >  1:1495945‑M2/29‑100 (MQ=255)

                                                                        ggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGc                            >  1:68925‑M2/28‑100 (MQ=255)

                                                                        GGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGc                            >  2:655557‑M1/1‑100 (MQ=255)

                                                                        GGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGc                            >  2:1505842‑M1/1‑100 (MQ=255)

                                                                        GGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGc                            <  2:332488‑M1/100‑1 (MQ=255)

                                                                         GATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCa                           >  2:392009‑M1/1‑100 (MQ=255)

                                                                         GATGCGGCGAAAACGCATTATCCGTCCTACAAAATCCAACAACATTAACGAATTAAACGGCCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCg                              >  2:532795‑M1/1‑97 (MQ=255)

                                                                              ggcgAAAACGCCTTATCCGGCTTACAAAATCCAACAACATTTACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATc                      >  2:1109538/1‑100 (MQ=255)

                                                                              ggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATc                      >  2:2145356/1‑100 (MQ=255)

                                                                               gcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcc                     >  2:1090339/1‑100 (MQ=255)

                                                                               gcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcc                     <  2:940651/100‑1 (MQ=255)

                                                                                    aaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCaaa                <  1:2531366/100‑1 (MQ=255)

                                                                                       gCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAAcc             >  2:193541/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCt            >  1:1303564/1‑100 (MQ=255)

                                                                                          ttATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTgg          <  1:2510664/100‑1 (MQ=255)

                                                                                          ttATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTgg          <  2:1265636/100‑1 (MQ=255)

                                                                                           tATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTg           <  1:579893/98‑1 (MQ=255)

                                                                                           tATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGc         >  1:24336/1‑100 (MQ=255)

                                                                                            atccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCg        <  2:290851‑M2/93‑1 (MQ=255)

                                                                                            atccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCg        >  2:936043‑M2/8‑100 (MQ=255)

                                                                                            atccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCACATCCGGCACGATCACCAAAACCTgg          >  1:11115‑M2/8‑98 (MQ=255)

                                                                                             tccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCAAGCATAGAATCCGGAACGATAACCAAAACCTGGCGt       >  1:424126‑M2/7‑100 (MQ=255)

                                                                                               cggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGttt     >  1:2189981‑M2/5‑100 (MQ=255)

                                                                                                ggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTa    >  2:364461‑M2/4‑100 (MQ=255)

                                                                                                  cCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATc  >  2:70395‑M2/2‑100 (MQ=255)

CTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATC  >  NC_000913/3255148‑3255345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.