New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 412470979 (0.860)14 (0.170) 9/164 NT 15.1% coding (2102/2199 nt) priA Primosome factor n' (replication factor Y)
?NC_000913 = 4124729 85 (1.010)coding (2082/2199 nt) priA Primosome factor n' (replication factor Y)

Only 100 of 141 total aligned reads displayed.

GTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCT  >  NC_000913/4124610‑4124808
                                                                                                   |                                                                                                   
gTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCA                                                                                                     >  1:822033‑M1/1‑100 (MQ=255)
gTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCA                                                                                                     >  2:1371240‑M1/1‑100 (MQ=255)
    aaCCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAgcg                                                                                                 >  1:405759/1‑100 (MQ=255)
    aaCCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAgcg                                                                                                 <  2:2024355/100‑1 (MQ=255)
     aCCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAgcgc                                                                                                >  2:1649697/1‑100 (MQ=255)
      cccTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCa                                                                                               <  1:1647569/100‑1 (MQ=255)
       ccTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCAc                                                                                              >  1:868802/1‑100 (MQ=255)
           aaTCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCAcgcg                                                                                           <  1:140968/99‑1 (MQ=255)
           aaTCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCgg                                                                                          >  2:597906/1‑100 (MQ=255)
           aaTCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCgg                                                                                          <  2:1304320/100‑1 (MQ=255)
            aTCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCAcgc                                                                                            >  1:98702/1‑97 (MQ=255)
             tCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGa                                                                                        <  2:1349303/100‑1 (MQ=255)
              cGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcg                                                                                       >  2:972348‑M1/1‑86 (MQ=255)
              cGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGaa                                                                                       >  2:1180090/1‑100 (MQ=255)
               ggATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAg                                                                                      >  1:2022756/1‑100 (MQ=255)
                gATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAgg                                                                                     >  1:1942676/1‑100 (MQ=255)
                  tCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGt                                                                                   <  2:1140736/100‑1 (MQ=255)
                    aaCATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGtgc                                                                                 >  2:796240/1‑100 (MQ=255)
                    aaCATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGtgc                                                                                 >  2:1136430/1‑100 (MQ=255)
                    aaCATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGtgc                                                                                 <  2:1482572/100‑1 (MQ=255)
                      cATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCtg                                                                               <  2:2572980‑M2/100‑3 (MQ=255)
                      cATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCtg                                                                               >  1:1456111‑M2/1‑98 (MQ=255)
                      cATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCtg                                                                               >  1:2488101‑M2/1‑98 (MQ=255)
                      cATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCtg                                                                               <  2:1636045‑M2/100‑3 (MQ=255)
                       aTCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAagcgcacccttcccgcgtgcgct                                                                              <  1:570931‑M1/100‑24 (MQ=255)
                         ccAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaa                                                                            <  2:1424958‑M2/100‑6 (MQ=255)
                         ccAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCtgca                                                                             >  1:1290325‑M2/1‑95 (MQ=255)
                           aGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaaca                                                                          <  2:1214463‑M1/100‑28 (MQ=255)
                            gCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGcaacaa                                                                         >  2:2374765/1‑100 (MQ=255)
                             cACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacaca                                                                        <  2:1752687‑M1/100‑30 (MQ=255)
                              aCCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacat                                                                       <  1:972345‑M1/100‑31 (MQ=255)
                              aCCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacat                                                                       <  1:772549‑M1/100‑31 (MQ=255)
                              aCCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacat                                                                       <  2:2148396‑M1/100‑31 (MQ=255)
                               cccATTTGACCTTACGAGAATCCGGTCTTGTATTGATGAGCTCCAGCGGACCGTTAGTGATGTGTTGCACGCGCGCGGGGGAAGGGTACTGcaacaa                                                                         >  1:1783820/1‑97 (MQ=255)
                               cacatTTCACCTTACGGTAATCCGTTATTGTAATGCTGACCGGCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacatc                                                                      <  1:1820491‑M1/98‑32 (MQ=255)
                                 cATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacatcat                                                                    <  2:730123‑M1/100‑34 (MQ=255)
                                 cATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacatcat                                                                    <  1:1588182‑M1/100‑34 (MQ=255)
                                  aTTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTg                                                                   >  2:478432/1‑100 (MQ=255)
                                      cACCTTACGGTAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacatcattaacg                                                               <  2:478547‑M1/100‑39 (MQ=255)
                                        ccTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgccagcg                                                             >  1:2374340/1‑100 (MQ=255)
                                           tACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgccagcgcca                                                          >  2:1068304/1‑100 (MQ=255)
                                            aCGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgccagcgccag                                                         <  2:1953076/100‑1 (MQ=255)
                                             cGGGGAGCCGGTATTGTATTGGTGAGCGCCAGCGTAGCGTTAATGATTTGTTGCAAGCGCACGCGGGAAGGGTGTTGCAACAATATCTgccagcgcc                                                           <  1:1501021/97‑1 (MQ=255)
                                             cGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgccagcgccagc                                                        <  1:1471170/100‑1 (MQ=255)
                                             cGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgccagcgccagc                                                        <  1:2268862/100‑1 (MQ=255)
                                               ggAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGCAGGGTGCTGCAACAATATCTgccagcgcca                                                          >  1:1054209/1‑96 (MQ=255)
                                               ggAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGa                                                      >  1:2040246/1‑100 (MQ=255)
                                                  aTCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCg                                                   >  2:561958/1‑100 (MQ=255)
                                                  aTCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCg                                                   <  2:1963898/100‑1 (MQ=255)
                                                    ccGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGcc                                                 >  1:1307645/1‑100 (MQ=255)
                                                         attgtattgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGtt                                            >  2:1456380/1‑100 (MQ=255)
                                                           tgtattgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTa                                          >  1:1676477/1‑100 (MQ=255)
                                                           tgtattgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTa                                          <  2:1263631/100‑1 (MQ=255)
                                                           tgtattgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTa                                          <  2:1579005/100‑1 (MQ=255)
                                                             tattgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAgg                                        <  1:1452449/100‑1 (MQ=255)
                                                             tattgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAgg                                        >  2:1622210/1‑100 (MQ=255)
                                                              attgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGt                                       >  1:462092/1‑100 (MQ=255)
                                                                 gatgaGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGcc                                    >  1:499164/1‑100 (MQ=255)
                                                                  atgaGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCa                                   <  1:1008369/100‑1 (MQ=255)
                                                                  atgaGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCa                                   >  2:1952829/1‑100 (MQ=255)
                                                                   tgaGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCag                                  >  2:964249/1‑100 (MQ=255)
                                                                     aGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCagag                                >  2:532206/1‑100 (MQ=255)
                                                                      gcgcCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGc                               >  2:1012017/1‑100 (MQ=255)
                                                                      gcgcCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGc                               >  1:676163/1‑100 (MQ=255)
                                                                        gcCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCg                             <  2:2374355/100‑1 (MQ=255)
                                                                             cGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAAcc                        >  1:343232/1‑100 (MQ=255)
                                                                                aCCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGa                     >  2:2050090/1‑100 (MQ=255)
                                                                                 ccGTTAATGATGTGTTGCTAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAc                    >  1:631129/1‑100 (MQ=255)
                                                                                 ccGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAc                    <  2:1194177/100‑1 (MQ=255)
                                                                                 ccGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAc                    >  2:767890/1‑100 (MQ=255)
                                                                                  cGTTAATTATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTCGGTGCCAGAGCCGGAACCGGa                     >  1:1158669/1‑98 (MQ=255)
                                                                                  cGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCTACGTTTAGGTGCCAGAGCCGGAACCGGAcc                   <  2:922437/100‑1 (MQ=255)
                                                                                  cGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAcc                   >  1:1943747/1‑100 (MQ=255)
                                                                                  cGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAcc                   <  1:1825788/100‑1 (MQ=255)
                                                                                       atgatgTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatg              <  1:1588182‑M2/100‑68 (MQ=255)
                                                                                       atgatgTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatg              <  2:730123‑M2/100‑68 (MQ=255)
                                                                                       atgatgTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattccagtaaggtgaaatg              <  2:346749‑M2/100‑68 (MQ=255)
                                                                                         gatgTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctgccggtcagcattacaataacggattaccgtaaggtgaaatgtg            <  1:1820491‑M2/100‑70 (MQ=255)
                                                                                          atgTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggt           <  1:807993‑M2/100‑71 (MQ=255)
                                                                                          atgTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggt           <  1:972345‑M2/100‑71 (MQ=255)
                                                                                          atgTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggt           <  1:772549‑M2/100‑71 (MQ=255)
                                                                                          atgTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggt           <  2:2148396‑M2/100‑71 (MQ=255)
                                                                                           tgtgTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtg          <  2:1752687‑M2/100‑72 (MQ=255)
                                                                                            gtgtTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCcac         <  2:869281/100‑1 (MQ=255)
                                                                                            gtgtTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGCTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCcac         >  1:1453955/1‑100 (MQ=255)
                                                                                             tgtTGCAgcacccttcctgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgct        >  1:1939361‑M1/1‑7 (MQ=255)
                                                                                              gtTGCTAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAg       <  2:631132/100‑1 (MQ=255)
                                                                                                tGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCTGCGACAGCCACGTGTAGGTGCCAGCGCGGGCACACGACCGAGAAcca           >  1:2086351/1‑93 (MQ=255)
                                                                                                 gcagcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggat    >  2:868805‑M1/1‑3 (MQ=255)
                                                                                                 gCAAGCGCACGCGGGCAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGCGCTGGAACCGGACCGAGCACCCACAGtct    >  1:2587560/1‑98 (MQ=255)
                                                                                                  cagcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatg   <  2:2572980‑M1/100‑99 (MQ=255)
                                                                                                  cagcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatg   <  2:1636045‑M1/100‑99 (MQ=255)
                                                                                                  cagcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatg   >  1:2482123‑M1/1‑2 (MQ=255)
                                                                                                  cagcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatg   >  1:2488101‑M1/1‑2 (MQ=255)
                                                                                                  cAAGCGCACGCGGGAAGGGTGCgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctgg   <  2:589983‑M2/100‑79 (MQ=255)
                                                                                                  cAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTtc   >  1:703460/1‑100 (MQ=255)
                                                                                                   agcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatgt  <  1:227048‑M1/100‑100 (MQ=255)
                                                                                                   agcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatgt  >  2:2026534‑M1/1‑1 (MQ=255)
                                                                                                   aaGCGCCAGCGGGAAGGGTGCTGCAATAATGGATGTCAGCGCCAGCGACCGCCACGTTGAGGTGCCGGAGCCGAAACCGGACCTAGAGCCCACAGTTtct  <  1:592906/100‑1 (MQ=255)
                                                                                                   aaGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTtct  >  1:2454937/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCT  >  NC_000913/4124610‑4124808

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.