BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4148421 =	NA (NA)	4 (0.050)	4/168	NT	NA	intergenic (‑104/+111)	yijO/eptC	AraC family putative transcriptional activator/LPS heptose I phosphoethanolamine transferase
*	?	NC_000913	4148465 =	NA (NA)	4 (0.050)	4/168	NT	NA	noncoding (36/82 nt)	REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 123 total aligned reads displayed.

TCCCTTAGGTATGTAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCG  >  NC_000913/4148323‑4148519

tCCCTTAGGTATGTAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAg                                                                                                   <  2:936115/100‑1 (MQ=255)

 cccTTAGGTATGTAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGt                                                                                                  >  2:605533/1‑100 (MQ=255)

 cccTTAGGTATGTAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGt                                                                                                  >  2:1916650/1‑100 (MQ=255)

 cccTTAGGTATGTAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGt                                                                                                  >  2:2190356/1‑100 (MQ=255)

  ccTTAGGTATGTAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGtt                                                                                                 >  2:2185950/1‑100 (MQ=255)

  ccTTAGGGATGTAGACGGGAAAACAGTCACTGGCATTATTAAAAAAGGCCACCTGAAACGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGtt                                                                                                 >  1:604394/1‑100 (MQ=255)

     tAGGTATGTAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTa                                                                                              <  2:544689/100‑1 (MQ=255)

       ggTATGTAGACGGGAAAACAGTAGCTGGCATTATCAAAAAAGGCCACCTGGAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTAtt                                                                                            <  1:1364379/100‑1 (MQ=255)

        gTATGTAGACGGGAAAACAGTAGCTGGCATTATTAAATAAGGCAACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTAtt                                                                                            <  1:829195/99‑1 (MQ=255)

            gTAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCgg                                                                                       <  1:382640/100‑1 (MQ=255)

             tAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCgg                                                                                       >  1:1254105/1‑99 (MQ=255)

             tAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCgg                                                                                       >  1:776048/1‑99 (MQ=255)

             tAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGa                                                                                      <  2:1526945/100‑1 (MQ=255)

             tAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGa                                                                                      >  1:956944/1‑100 (MQ=255)

             tAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGa                                                                                      >  1:2454879/1‑100 (MQ=255)

              aGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGAt                                                                                     >  2:2252298/1‑100 (MQ=255)

              aGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGAt                                                                                     >  2:953164/1‑100 (MQ=255)

               gACGGGAAAACAGTAACTGGCATTATTAAAAGAGGCCAACTGAAACGTGTGGCCTGGGGGGAGTTCGATGTAAACATTGCGGCAGGTGTATTga                                                                                          >  1:1587870/1‑93 (MQ=255)

               gACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGAtg                                                                                    <  1:2126656/100‑1 (MQ=255)

               atctggAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGAtg                                                                                    <  2:1388243/96‑1 (MQ=255)

                  gggAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTgg                                                                                 >  1:869310/1‑100 (MQ=255)

                   ggAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGAtgagat                                                                                >  1:1388235/1‑96 (MQ=255)

                   ggAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGc                                                                                >  2:1917248/1‑100 (MQ=255)

                    gAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCg                                                                               >  2:799386/1‑100 (MQ=255)

                     gatctaGTAACTGGCATTATTACAAAAGGCCTCCTGATAAGTGTGGCTTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGt                                                                              <  1:1749603/95‑1 (MQ=255)

                      aaaCAGTAACTGGCATTATCAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTa                                                                             <  2:1622074/100‑1 (MQ=255)

                         cAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAAc                                                                          >  1:1830179/1‑100 (MQ=255)

                          actAACTGGCATTGTTAAAAAAGGCCACCTGTAAAGTGTGGCGTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTagatc                                                                         >  2:1749612/3‑96 (MQ=255)

                            tcttccgatctattaAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGcc                                                                       <  1:1375788/90‑1 (MQ=255)

                            tAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGcc                                                                       <  1:1443389/100‑1 (MQ=255)

                             aaCTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCt                                                                      <  1:69125/100‑1 (MQ=255)

                              aCTGGCATTATTAAAAAAGGCCACCGGAAAAGTCTGGCCTGAGGGGGGTTCGAAGTAAACCTTGCGGAAGTTGTATAGCCGGCTGTGGCGGAAAc                                                                          >  1:1820225/1‑95 (MQ=255)

                               cTGGCATTATTAAAAAAGGCCACCTGAAGTGGGTGGCCTGAGGGGGGTGCGATGTAGAGATGGGGGGAGGTGTATTTGCGGATGGGGCGTAGACGCCTTa                                                                    >  2:2064738/1‑100 (MQ=255)

                                 ggCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATc                                                                  >  1:27181/1‑100 (MQ=255)

                                 ggCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATc                                                                  >  1:1498021/1‑100 (MQ=255)

                                     ttattaAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGc                                                              <  2:1626311/100‑1 (MQ=255)

                                     ttattaAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGc                                                              >  1:9623/1‑100 (MQ=255)

                                      tattaAAAAAGGCCGCCTGAAAAGTGTGGCCTGAGGGGAGTTCGAGGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGcc                                                             <  2:1202508/100‑1 (MQ=255)

                                      tattaAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGcc                                                             <  2:1720168/100‑1 (MQ=255)

                                       attaAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCt                                                            >  2:533939/1‑100 (MQ=255)

                                       attaAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCt                                                            >  2:533714/1‑100 (MQ=255)

                                       attaAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCt                                                            >  2:606404/1‑100 (MQ=255)

                                        ttaAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTa                                                           >  1:930515/1‑100 (MQ=255)

                                        ttaAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGGATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTa                                                           <  2:1214647/100‑1 (MQ=255)

                                         taAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAc                                                          >  2:1142855/1‑100 (MQ=255)

                                         taAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAc                                                          <  1:162060/100‑1 (MQ=255)

                                          aaaaaaGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAcc                                                         >  1:1449802/1‑100 (MQ=255)

                                          aaaaaaGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAcc                                                         >  1:934777/1‑100 (MQ=255)

                                                ggCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCcgcg                                                   >  2:1705237/1‑100 (MQ=255)

                                                ggCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCcgcg                                                   <  2:157778/100‑1 (MQ=255)

                                                ggCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCcgcg                                                   <  1:326224/100‑1 (MQ=255)

                                                 gCCACCTGAAAAGTGTGGCCCTATGTGGGTTCGATGTAAACATTGAGGAAGATATATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCcgcg                                                   >  1:1227777/1‑99 (MQ=25)

                                                  tgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGAt                                                 >  2:762387‑M1/49‑100 (MQ=255)

                                                  ccACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGAt                                                 >  1:30453/1‑100 (MQ=255)

                                                  ccACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGAt                                                 <  2:934780/100‑1 (MQ=255)

                                                   gccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATc                                                >  1:377676‑M1/48‑100 (MQ=255)

                                                       tGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGTGGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTa                                            >  2:746302/1‑100 (MQ=255)

                                                       tGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTa                                            >  2:670898/1‑100 (MQ=255)

                                                        gAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAg                                           >  1:223628/1‑100 (MQ=255)

                                                         aaaaGTGTGGGCTGAGGGGAGTGCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAgg                                          <  1:2042706/100‑1 (MQ=255)

                                                         aaaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAgg                                          <  1:665461/100‑1 (MQ=255)

                                                         aaaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTAATGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAgg                                          <  2:1884582/100‑1 (MQ=255)

                                                          aaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGc                                         >  2:217147/1‑100 (MQ=255)

                                                          aaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAAAGCCTTATCCAGCCTACCGCCGCGATCTGTAGGc                                         >  1:631207/1‑100 (MQ=255)

                                                              tgtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGa                                     >  1:2231577/1‑100 (MQ=255)

                                                               gtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCgggt                                    >  2:304193/1‑98 (MQ=255)

                                                                tgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATa                                   <  1:1823435/100‑1 (MQ=255)

                                                                 ggCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATaa                                  >  2:890424/1‑100 (MQ=255)

                                                                  gCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAg                                 <  2:45242/100‑1 (MQ=255)

                                                                  gCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAg                                 <  2:1974663/100‑1 (MQ=255)

                                                                  gCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGACCGGATAAg                                 >  1:240916/1‑100 (MQ=255)

                                                                   ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                >  1:1193236/1‑100 (MQ=255)

                                                                   ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                <  2:355396/100‑1 (MQ=255)

                                                                   ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                >  1:2152052/1‑100 (MQ=255)

                                                                   ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                <  2:355404/100‑1 (MQ=255)

                                                                   ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                >  1:2078213/1‑100 (MQ=255)

                                                                   ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                >  2:1102235/1‑100 (MQ=255)

                                                                    cTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAc                               <  1:2452356/100‑1 (MQ=255)

                                                                     ttatgggAGTTCGATTTAAACATTGCCGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcg                              <  1:541041/96‑1 (MQ=255)

                                                                     tGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcg                              >  1:1016884/1‑100 (MQ=255)

                                                                       aGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcgcg                            <  2:1725084/100‑1 (MQ=255)

                                                                          tgAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCa                         >  1:973891/2‑100 (MQ=255)

                                                                          ggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGGAAACGCCTTATCCAGCATACCGCCGCGATCTGTAGGCCGGATAAGACGCGTc                          >  1:240182/1‑99 (MQ=255)

                                                                           gAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCaa                        <  2:27182/100‑1 (MQ=255)

                                                                             gTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGc                      >  1:217022/1‑100 (MQ=255)

                                                                                cGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTc                   <  1:217145/100‑1 (MQ=255)

                                                                                   tGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCa                >  1:148477/1‑100 (MQ=255)

                                                                                    gTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCAt               >  2:1116638/1‑100 (MQ=255)

                                                                                    gTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCAt               >  1:727543/1‑100 (MQ=255)

                                                                                     tAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATc              >  2:1141147/1‑100 (MQ=255)

                                                                                      aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATGCGACGCTTGACGCGTcttatcc             <  1:443430/100‑7 (MQ=25)

                                                                                      aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATcc             >  1:1244330/1‑100 (MQ=255)

                                                                                         cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGc          >  1:836065/1‑100 (MQ=255)

                                                                                         cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGc          >  2:1241280/1‑100 (MQ=255)

                                                                                           ttGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCaa        >  2:1234306/1‑100 (MQ=255)

                                                                                              cggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATa     <  2:2401192‑M1/96‑1 (MQ=255)

                                                                                              cggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATa     <  2:2167870‑M1/96‑1 (MQ=255)

                                                                                               ggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAg    <  2:360212‑M1/97‑1 (MQ=255)

                                                                                                gcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgc   <  1:272016‑M1/98‑1 (MQ=255)

                                                                                                 cAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgcg  >  1:2018639‑M1/2‑100 (MQ=255)

TCCCTTAGGTATGTAGACGGGAAAACAGTAACTGGCATTATTAAAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCG  >  NC_000913/4148323‑4148519

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.