BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4148421 =	NA (NA)	4 (0.050)	4/168	NT	NA	intergenic (‑104/+111)	yijO/eptC	AraC family putative transcriptional activator/LPS heptose I phosphoethanolamine transferase
*	?	NC_000913	4148465 =	NA (NA)	4 (0.050)	4/168	NT	NA	noncoding (36/82 nt)	REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP308 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 125 total aligned reads displayed.

AAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAG  >  NC_000913/4148366‑4148564

cgctatttgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactg                                                                                                     >  1:2018639‑M2/100‑100 (MQ=255)

aaaaaGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAccg                                                                                                     >  2:465024/1‑100 (MQ=255)

 gctatttgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactGc                                                                                                    <  1:272016‑M2/2‑1 (MQ=255)

 aaaaGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTAccgc                                                                                                    <  1:2565395/100‑1 (MQ=255)

  ctatttgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactg                                                                                                     >  1:1675953‑M2/98‑98 (MQ=255)

  ctatttgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactGcc                                                                                                   <  2:360212‑M2/3‑1 (MQ=255)

   tatttgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactGCcg                                                                                                  <  2:2167870‑M2/4‑1 (MQ=255)

   tatttgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactGCcg                                                                                                  <  2:2401192‑M2/4‑1 (MQ=255)

    atttgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACcgccgc                                                                                                 >  1:1445727‑M1/52‑100 (MQ=255)

     ggCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCcgcg                                                                                                <  2:157778/100‑1 (MQ=255)

     ggCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCcgcg                                                                                                >  2:1705237/1‑100 (MQ=255)

      gCCACCTGAAAAGTGTGGCCCTATGTGGGTTCGATGTAAACATTGAGGAAGATATATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCcgcg                                                                                                >  1:1227777/1‑99 (MQ=25)

       tgccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGAt                                                                                              >  2:762387‑M1/49‑100 (MQ=255)

       ccACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGAt                                                                                              <  2:934780/100‑1 (MQ=255)

       ccACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGAt                                                                                              <  1:1917238/100‑1 (MQ=255)

       ccACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGAt                                                                                              >  1:30453/1‑100 (MQ=255)

        gccggatgcgacgcttgacgcgtcttatccggcctacagatcgcggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATc                                                                                             >  1:377676‑M1/48‑100 (MQ=255)

         aCCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCt                                                                                            <  2:1147776/100‑1 (MQ=255)

            tGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGTGGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTa                                                                                         >  2:746302/1‑100 (MQ=255)

             gAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAg                                                                                        >  1:223628/1‑100 (MQ=255)

              aaaaGTGTGGGCTGAGGGGAGTGCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAgg                                                                                       <  1:2042706/100‑1 (MQ=255)

              aaaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTAATGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAgg                                                                                       <  2:1884582/100‑1 (MQ=255)

               gcgacgcttgacgcgtcttatccggcctacagatcgcggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGc                                                                                      >  1:740537‑M1/41‑100 (MQ=255)

               aaaGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAAAGCCTTATCCAGCCTACCGCCGCGATCTGTAGGc                                                                                      >  1:631207/1‑100 (MQ=255)

                   tgtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGa                                                                                  >  1:2231577/1‑100 (MQ=255)

                    gtgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCgggt                                                                                 >  2:304193/1‑98 (MQ=255)

                     tgGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATa                                                                                <  1:1823435/100‑1 (MQ=255)

                      ggCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATaa                                                                               >  2:890424/1‑100 (MQ=255)

                       gCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAg                                                                              <  2:1974663/100‑1 (MQ=255)

                       gCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAg                                                                              <  2:45242/100‑1 (MQ=255)

                       gCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGACCGGATAAg                                                                              >  1:240916/1‑100 (MQ=255)

                        ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                             >  1:2152052/1‑100 (MQ=255)

                        ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                             >  2:1102235/1‑100 (MQ=255)

                        ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                             >  1:1193236/1‑100 (MQ=255)

                        ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                             <  2:355404/100‑1 (MQ=255)

                        ccTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGa                                                                             <  2:355396/100‑1 (MQ=255)

                          tGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcg                                                                           >  1:1016884/1‑100 (MQ=255)

                          tGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcg                                                                           <  1:2129353/100‑1 (MQ=255)

                          tGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcg                                                                           >  2:2229534/1‑100 (MQ=255)

                            aGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGAcgcg                                                                         <  2:1725084/100‑1 (MQ=255)

                               tgAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCa                                                                      >  1:973891/2‑100 (MQ=255)

                               ggAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGGAAACGCCTTATCCAGCATACCGCCGCGATCTGTAGGCCGGATAAGACGCGTc                                                                       >  1:240182/1‑99 (MQ=255)

                                gAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCaa                                                                     <  2:27182/100‑1 (MQ=255)

                                 aGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAg                                                                    <  1:32977/100‑1 (MQ=255)

                                  gTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGc                                                                   >  1:217022/1‑100 (MQ=255)

                                       gcctacagatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGc                                                              >  1:740537‑M2/61‑100 (MQ=255)

                                         gTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCAt                                                            >  1:727543/1‑100 (MQ=255)

                                         gTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCAt                                                            >  2:1116638/1‑100 (MQ=255)

                                           aaaCATTGCGGCAGTTGTATTGCCGGATGTGTCGTAAACGCCTTATCCAGCCTAACGCCGCGATCTGTAGGCCGCATAAGACGCGTCCAGCGTCGCATcc                                                          >  1:624294/1‑100 (MQ=37)

                                           aaaCATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATGCGACGCTTGACGCGTcttatcc                                                          <  1:443430/100‑7 (MQ=25)

                                            aaCATTGCGGCCGTTGTATTGCCGGATGTGGCGCAAACGCCTTATCCCGCCTACCGCCGCGATCTGTAGGCCGGATGCGACGCTTGACGCGTcttatcn                                                          <  1:1278529/99‑7 (MQ=25)

                                              gatcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGc                                                       >  1:377676‑M2/54‑100 (MQ=255)

                                              cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGc                                                       >  1:836065/1‑100 (MQ=255)

                                              cATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGc                                                       >  2:1241280/1‑100 (MQ=255)

                                               atcgcggcggtaggctggataaggcgtttacgccacatccggcaatacaactGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCa                                                      >  2:762387‑M2/53‑100 (MQ=255)

                                                ttGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCaa                                                     >  2:1234306/1‑100 (MQ=255)

                                                  gcggcggtaggctggataaggcgtttacgccacatccggcaatacaactGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAAt                                                   >  1:1445727‑M2/50‑100 (MQ=255)

                                                   cggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATa                                                  <  2:2401192‑M1/96‑1 (MQ=255)

                                                   cggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATa                                                  <  2:2167870‑M1/96‑1 (MQ=255)

                                                    ggcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAg                                                 <  2:360212‑M1/97‑1 (MQ=255)

                                                     gcAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgc                                                <  1:272016‑M1/98‑1 (MQ=255)

                                                      cAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAgcg                                               >  1:2018639‑M1/2‑100 (MQ=255)

                                                      cAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAg                                                 >  1:1675953‑M1/2‑98 (MQ=255)

                                                          tGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg                                           <  2:1366763/100‑1 (MQ=255)

                                                          tGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTg                                           >  2:2077254/1‑100 (MQ=255)

                                                            tATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGc                                         >  2:1047542/1‑100 (MQ=255)

                                                             aTTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCt                                        <  2:1016502/100‑1 (MQ=255)

                                                              ttGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTg                                       <  2:1920206/100‑1 (MQ=255)

                                                                gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                     >  1:1521744/1‑100 (MQ=255)

                                                                gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                     >  1:2378580/1‑100 (MQ=255)

                                                                gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                     >  2:2570891/1‑100 (MQ=255)

                                                                gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                     <  2:1498030/100‑1 (MQ=255)

                                                                gCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGAt                                     <  2:1138922/100‑1 (MQ=255)

                                                                      tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                               <  2:168502/100‑1 (MQ=255)

                                                                      tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                               <  1:606401/100‑1 (MQ=255)

                                                                      tgtgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAc                               <  2:2485572/100‑1 (MQ=255)

                                                                       gtgGCGTAACCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACt                              <  1:2313506/100‑1 (MQ=255)

                                                                        tgGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTg                             >  1:1466164/1‑100 (MQ=255)

                                                                         ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGTGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                            >  2:2104059/1‑100 (MQ=255)

                                                                         ggCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGa                            >  2:701984/1‑100 (MQ=255)

                                                                          gCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAt                           >  1:2276497/1‑100 (MQ=255)

                                                                          gCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGAt                           >  2:484819/1‑100 (MQ=255)

                                                                             tAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAc                        >  2:1881403/1‑100 (MQ=255)

                                                                               aaCGCCTTATCCCGCCTCCCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAcc                       <  1:2447563/99‑1 (MQ=255)

                                                                                aCGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCa                     <  2:913403/100‑1 (MQ=255)

                                                                                 cGCCTTATCCAGCCTACCGGCGCGATCTGTAGGCCGGATAAGACGCGTCACGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAccc                      <  1:1809730/98‑1 (MQ=255)

                                                                                 cGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTAATGCTTcccc                      >  2:860193/1‑98 (MQ=255)

                                                                                 cGCCGTATCCAGCCTATCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCTTCTCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTAccc                      <  1:1958327/98‑1 (MQ=38)

                                                                                  gCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAcc                   <  1:153623/100‑1 (MQ=255)

                                                                                  gCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCAcc                   <  2:105765/100‑1 (MQ=255)

                                                                                    cTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTg                 >  2:1592313/1‑100 (MQ=255)

                                                                                      tATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCTTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGAt               <  1:635004/100‑1 (MQ=255)

                                                                                      tATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGAt               >  2:1037745/1‑100 (MQ=255)

                                                                                       aTCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATc              >  2:298232/1‑100 (MQ=255)

                                                                                        tCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCg             <  2:46869/100‑1 (MQ=255)

                                                                                         ccAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCCTCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGc            >  1:2083274/1‑100 (MQ=255)

                                                                                              cTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAg       <  2:1449810/100‑1 (MQ=255)

                                                                                               tACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAgg      <  2:1658191/100‑1 (MQ=255)

                                                                                               tACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAgg      <  1:1102231/100‑1 (MQ=255)

                                                                                                   GCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAg  <  1:2018938‑M2/100‑1 (MQ=255)

AAAAAGGCCACCTGAAAAGTGTGGCCTGAGGGGAGTTCGATGTAAACATTGCGGCAGTTGTATTGCCGGATGTGGCGTAAACGCCTTATCCAGCCTACCGCCGCGATCTGTAGGCCGGATAAGACGCGTCAAGCGTCGCATCCGGCAAATAGCGCCTGGCTGATAATTACTGATTACCCACCTGATCGCCATAGGGCAG  >  NC_000913/4148366‑4148564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.