New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4326350NA (NA)12 (0.140) 5/164 NT NA noncoding (549/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 4326380 NA (NA)noncoding (579/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 187 total aligned reads displayed.

GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCG  >  NC_000913/4326251‑4326447
                                                                                                    |                                                                                                 
   ggATGCCGCGTAATTGCCTTATCCGGCCTACGGACGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgc                                                                                                 <  1:419430‑M1/99‑3 (MQ=255)
    gATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccg                                                                                               >  1:1202119‑M1/1‑96 (MQ=255)
     aTGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccgg                                                                                              <  2:818572‑M1/100‑6 (MQ=255)
      tGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccgga                                                                                             >  2:2569690‑M1/1‑94 (MQ=255)
      tGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccgg                                                                                              >  1:1644080‑M1/1‑94 (MQ=255)
       gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggat                                                                                            >  2:1024842‑M1/1‑93 (MQ=255)
        cggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATg                                                                                           >  1:2130691/1‑100 (MQ=255)
        cggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCCGGCAACGGTGCCAGATg                                                                                           >  1:2592704/1‑100 (MQ=11)
         ggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgc                                                                                          >  2:2339472/1‑100 (MQ=40)
         ggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgc                                                                                          >  2:2518237/1‑100 (MQ=255)
          gcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgcg                                                                                         >  1:2371081/1‑100 (MQ=255)
          gcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCCGGCAACGGTGCCAGATgcc                                                                                         <  2:1972463/100‑2 (MQ=11)
           cgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgcgg                                                                                        >  2:33289/1‑100 (MQ=40)
             tAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCCTCTGGCACCGTTGCCGGCTgcggcg                                                                                      >  1:385160/1‑100 (MQ=255)
               aaCGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGGCGCATCAGGCATCCGGCAACGGTGCCAGATgcctgatg                                                                                    <  2:2592723/100‑7 (MQ=11)
                 cGCCTTATCCGGCCTACGGATGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGTATCAGGCATCTGGCACCGTTgccggataaggcgctcg                                                                                  <  2:202685‑M1/100‑18 (MQ=255)
                 cGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGa                                                                                   >  1:828613/1‑99 (MQ=255)
                 cGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAg                                                                                  >  2:501965/1‑100 (MQ=255)
                   ccTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAgcg                                                                                <  1:651370/100‑1 (MQ=255)
                     ttATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGcc                                                                              <  1:954466/100‑1 (MQ=255)
                      tATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCt                                                                             >  2:1373508/1‑100 (MQ=255)
                        tCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgca                                                                           <  2:274436‑M1/100‑25 (MQ=255)
                        tCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTA                                                                           >  1:2102692‑M2/1‑100 (MQ=255)
                        tCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTA                                                                           <  1:538390‑M2/100‑1 (MQ=255)
                            gCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCG                                                                       <  2:1608061‑M2/100‑1 (MQ=255)
                             ccTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatcctg                                                                      <  2:1755946‑M1/100‑30 (MQ=255)
                             ccTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccgg                                                                      <  1:1243626‑M1/100‑30 (MQ=255)
                              cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggc                                                                     <  2:935193‑M1/100‑31 (MQ=255)
                              cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccgg                                                                      <  1:902953‑M1/99‑30 (MQ=255)
                               tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                    >  2:1205805/1‑100 (MQ=255)
                                 cGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTCGGCACCGTTgccggataaggcgtttacgccgcatccggcaac                                                                  <  2:1269631‑M1/100‑34 (MQ=255)
                                 cGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggcaac                                                                  <  1:1760396‑M1/100‑34 (MQ=255)
                                  ggAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAc                                                                 <  1:1612367/100‑1 (MQ=255)
                                   gAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAcc                                                                >  2:730845/1‑100 (MQ=255)
                                   gAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAcc                                                                <  2:621341/100‑1 (MQ=255)
                                    ccgatctgggaatttgtAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggcaacggt                                                               <  1:1040035‑M1/93‑37 (MQ=255)
                                      ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGAt                                                             <  2:656466/100‑1 (MQ=255)
                                       gTGAGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTGGCATCAGGAAGCTGGCACCGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCTTAcgg                                                               >  1:2069960/1‑95 (MQ=11)
                                        tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATca                                                           >  1:309308/1‑100 (MQ=255)
                                          cGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcaca                                                         <  1:1350449/100‑1 (MQ=255)
                                          cGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcaca                                                         <  2:229859/100‑1 (MQ=255)
                                           gggAATTTGTGGGCCTGATAAGACGCGCAAGGGTCGCATCGGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCTTTATCCGGCTTACCGATca                                                           <  1:2486473/97‑1 (MQ=18)
                                           gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggcaacggtagatcgg                                                        >  2:1040038‑M1/1‑57 (MQ=255)
                                           gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                        >  2:1867286/1‑100 (MQ=255)
                                           gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                        >  2:1503115/1‑100 (MQ=255)
                                            ggAATTTGTTGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAcaaattcccgc                                                       >  1:218974/1‑90 (MQ=18)
                                            ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                       <  1:1507270/100‑1 (MQ=255)
                                            ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                       >  2:2493430/1‑100 (MQ=255)
                                             gAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaata                                                      <  2:1480603/100‑1 (MQ=255)
                                              aaTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatac                                                     >  2:1936214/1‑100 (MQ=255)
                                                  tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATc                                                 >  2:1632992/1‑100 (MQ=255)
                                                     aGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGt                                              <  1:1328021/100‑1 (MQ=255)
                                                      ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                             >  2:2184816/1‑100 (MQ=255)
                                                      ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                             >  2:1133683/1‑100 (MQ=255)
                                                      ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                             >  2:1053780/1‑100 (MQ=255)
                                                      ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                             <  1:577833/100‑1 (MQ=255)
                                                        ccTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCt                                           >  2:830969/1‑100 (MQ=255)
                                                         cTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCtt                                          >  1:411099/1‑100 (MQ=255)
                                                          tGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGACGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAAGCAGTTCttt                                         >  1:562265/1‑100 (MQ=255)
                                                            aTAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCttttt                                       <  1:2426031/100‑1 (MQ=255)
                                                            aTAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCttttt                                       <  1:2579846/100‑1 (MQ=255)
                                                             tAAGACGCGCAAGCGTCGCATCAGGCATCTTGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                      <  2:1905966/100‑1 (MQ=255)
                                                             tAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGAGGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                      <  1:364913/100‑1 (MQ=255)
                                                             tAAGACGCGCAAGCGTCGCATCAGGCAGCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                      <  1:349879/100‑1 (MQ=255)
                                                              aaGACGCGCAAGCGTCGCAGCAGGCAGGTGGCACCGTTGCGGGATGCGGCGCGAGCGCCTTATCCGGCTGACCGATCACAATACAATCAGTTCTTTTTca                                     <  1:1108258/100‑1 (MQ=25)
                                                               aGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                    >  2:1021573/1‑100 (MQ=255)
                                                                gACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcaca                                   >  1:601478/1‑100 (MQ=255)
                                                                gACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                    <  1:128524/99‑1 (MQ=255)
                                                                gACGCGCAAGCGTCGCATCAGGCATCTGGAACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                    <  2:1288692/99‑1 (MQ=255)
                                                                gACGCGCAAGCGTCGAATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcaca                                   <  2:2557209/100‑1 (MQ=255)
                                                                  ctcgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACaaa                                 >  2:1756984/3‑100 (MQ=255)
                                                                   gcgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCAAAAAc                                >  1:2141269/1‑100 (MQ=255)
                                                                     gcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTc                              <  1:803095/100‑1 (MQ=255)
                                                                     gcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGAATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTc                              <  1:104226/100‑1 (MQ=255)
                                                                      cAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCa                             >  2:2379478/1‑100 (MQ=255)
                                                                            tCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTc                       <  2:1259318/100‑1 (MQ=255)
                                                                            tCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTc                       <  2:579746/100‑1 (MQ=255)
                                                                              gCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAg                     <  2:1763859/100‑1 (MQ=255)
                                                                               cATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGt                    <  2:2485177/100‑1 (MQ=255)
                                                                               cATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGt                    >  1:1955075/1‑100 (MQ=255)
                                                                                ntCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGtt                   >  1:492800/2‑100 (MQ=255)
                                                                                aTCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGtt                   >  1:140759/1‑100 (MQ=255)
                                                                                  cAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTc                 <  2:796097/100‑1 (MQ=255)
                                                                                  cAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTc                 >  1:929802/1‑100 (MQ=255)
                                                                                   aGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCa                <  1:1010787/100‑1 (MQ=255)
                                                                                    ggCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCAt               <  1:2299162/100‑1 (MQ=255)
                                                                                       aTCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCgg            <  1:2282323/100‑1 (MQ=255)
                                                                                       aTCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCgg            <  1:290871/100‑1 (MQ=255)
                                                                                          cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc          <  1:564141/100‑1 (MQ=255)
                                                                                          cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc          >  1:1553209/1‑100 (MQ=255)
                                                                                          cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc          >  2:432287/1‑100 (MQ=255)
                                                                                          cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc          <  1:1780430/100‑1 (MQ=255)
                                                                                           tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc         <  1:1893647/100‑1 (MQ=255)
                                                                                           tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc         >  2:1710166/1‑100 (MQ=255)
                                                                                            ggCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCa        >  2:448571/1‑100 (MQ=255)
                                                                                                  gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccg  <  1:1760396‑M2/100‑68 (MQ=255)
                                                                                                  gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgagcgtcttatcaggcctacaaattcccgcaccctccg  <  1:1966709‑M2/100‑68 (MQ=255)
                                                                                                  gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacgatgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccg  <  1:1377719‑M2/100‑68 (MQ=255)
                                                                                                  gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCg  >  2:1413359/1‑100 (MQ=255)
                                                                                                  gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCg  <  1:644379/100‑1 (MQ=255)
                                                                                                    |                                                                                                 
GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCG  >  NC_000913/4326251‑4326447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.