New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4326350NA (NA)12 (0.140) 5/164 NT NA noncoding (549/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 4326380 NA (NA)noncoding (579/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 185 total aligned reads displayed.

CTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTC  >  NC_000913/4326281‑4326479
                                                                                                   |                                                                                                   
cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCTGGATGCGGCGCGAGCGCCTTATCCGGC                                                                                                     >  1:308745‑M2/1‑100 (MQ=255)
 tACAGAGGGTGCGGGAATTAGCAGGCGTGATAAGATGCGCAAGCGTCGCATAAGGCATCTGGCGCCGTTCGCGAATGCGGCGCGAGCGACTTATCCAGc                                                                                                     >  1:1547741/1‑99 (MQ=17)
    ggAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAc                                                                                                 <  2:1211686/100‑1 (MQ=255)
     gAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAcc                                                                                                >  2:730845/1‑100 (MQ=255)
     gAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAcc                                                                                                <  2:621341/100‑1 (MQ=255)
       gggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGa                                                                                              <  2:1033690/100‑1 (MQ=255)
        ggTGCGGGAATTTGTAGGCCTGATAGGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGAt                                                                                             <  1:913850/100‑1 (MQ=255)
        ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGAt                                                                                             <  2:656466/100‑1 (MQ=255)
          tGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATca                                                                                           >  1:309308/1‑100 (MQ=255)
           gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGTTGGCACTGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                                                          >  1:1111996/1‑100 (MQ=255)
            cGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcaca                                                                                         <  1:1350449/100‑1 (MQ=255)
             gggAATTTGTGGGCCTGATAAGACGCGCAAGGGTCGCATCGGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCTTTATCCGGCTTACCGATca                                                                                           <  1:2486473/97‑1 (MQ=18)
             gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                                                        >  2:1867286/1‑100 (MQ=255)
              ggAATTTGTTGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAcaaattcccgc                                                                                       >  1:218974/1‑90 (MQ=18)
              ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                                                       >  2:2493430/1‑100 (MQ=255)
              ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                                                       <  2:1538580/100‑1 (MQ=255)
              ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                                                       <  2:2320347/100‑1 (MQ=255)
                aaTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatac                                                                                     >  2:1936214/1‑100 (MQ=255)
                  tttGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaataca                                                                                    <  1:2013211/99‑1 (MQ=255)
                      tAGGCCGGATAAGACGCGCAAGCGTCGCATCAGGAATCTGGCACCGTTGGCGGATGCGGCGCGAGCGCATTATGCGGCTTACCGATCAGAATACAATctg                                                                               >  1:1078250/1‑98 (MQ=21)
                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                                                             >  1:533655/1‑100 (MQ=255)
                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                                                             >  2:1053780/1‑100 (MQ=255)
                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                                                             >  2:1133683/1‑100 (MQ=255)
                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                                                             <  1:577833/100‑1 (MQ=255)
                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                                                             >  2:2184816/1‑100 (MQ=255)
                          ccTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCt                                                                           >  2:830969/1‑100 (MQ=255)
                           cTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCtt                                                                          >  1:411099/1‑100 (MQ=255)
                            tGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGACGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAAGCAGTTCttt                                                                         >  1:562265/1‑100 (MQ=255)
                               tAAGACGCGCAAGCGTCGCATCAGGCATCTTGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                                                      <  2:1905966/100‑1 (MQ=255)
                               tAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGAGGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                                                      <  1:364913/100‑1 (MQ=255)
                               tAAGACGCGCAAGCGTCGCATCAGGCAGCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                                                      <  1:349879/100‑1 (MQ=255)
                                 aGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                                                    >  2:1021573/1‑100 (MQ=255)
                                 aGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                                                    <  1:128395/100‑1 (MQ=255)
                                  gACGCGCAAGCGTCGCATCAGGCATCTGGAACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                                                    <  2:1288692/99‑1 (MQ=255)
                                  gACGCGCAAGCGTCGCATCAGGCAGCTGGCACTGTTGCCGGATGCGGCGCAAACGCCTTATCCGGCCTACGGACGACACGGCAATCAGTTCGTCTGcaca                                                                   >  1:1288686/1‑100 (MQ=11)
                                  gACGCGCAAGCGTCGAATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcaca                                                                   <  2:2557209/100‑1 (MQ=255)
                                    ctcgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACaaa                                                                 >  2:1756984/3‑100 (MQ=255)
                                     gcgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCAAAAAc                                                                >  1:2141269/1‑100 (MQ=255)
                                      cgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCCGTTCTTTTTCACAAACt                                                               >  1:2407564/1‑100 (MQ=255)
                                       gcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTc                                                              >  1:267342/1‑100 (MQ=255)
                                              tCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTc                                                       <  2:1259318/100‑1 (MQ=255)
                                              tCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTc                                                       <  2:579746/100‑1 (MQ=255)
                                                gCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAg                                                     <  2:1763859/100‑1 (MQ=255)
                                                 cATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGt                                                    >  2:2569896/1‑100 (MQ=255)
                                                 cATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGt                                                    <  2:2485177/100‑1 (MQ=255)
                                                  aTCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGtt                                                   >  1:140759/1‑100 (MQ=255)
                                                  aTCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGtt                                                   >  2:1896667/1‑100 (MQ=255)
                                                    cAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTc                                                 <  2:796097/100‑1 (MQ=255)
                                                    cAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTc                                                 >  2:285120/1‑100 (MQ=255)
                                                     aGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCa                                                <  1:1010787/100‑1 (MQ=255)
                                                        cATCTGGCACCGTTGCCGGATGCGACGAGAGCGCCTTATACGGCTTACCGATCACAATAAAATCAGTTCTTTTTCCCAAACTCAGATTTCAGTTTCATCg                                             >  1:2240183/1‑100 (MQ=255)
                                                         ccgatctaccgttgcCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattccc                                            >  2:1040038‑M2/8‑43 (MQ=255)
                                                         aTCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCgg                                            <  2:1454141/100‑1 (MQ=255)
                                                         aTCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCgg                                            <  1:2282565/100‑1 (MQ=255)
                                                         aTCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCgg                                            <  1:2282323/100‑1 (MQ=255)
                                                           cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc                                          >  2:432287/1‑100 (MQ=255)
                                                           cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc                                          <  1:564141/100‑1 (MQ=255)
                                                           cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc                                          <  1:2339458/100‑1 (MQ=255)
                                                           cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc                                          <  1:1780430/100‑1 (MQ=255)
                                                            tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc                                         <  1:1893647/100‑1 (MQ=255)
                                                            tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc                                         >  2:1501551/1‑100 (MQ=255)
                                                            tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc                                         >  2:1710166/1‑100 (MQ=255)
                                                            tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc                                         <  1:1608052/100‑1 (MQ=255)
                                                            tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc                                         <  1:614999/100‑1 (MQ=255)
                                                             ggCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCa                                        >  1:1493646/1‑100 (MQ=255)
                                                             ggCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCa                                        <  2:267345/100‑1 (MQ=255)
                                                             ggCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCa                                        >  2:448571/1‑100 (MQ=255)
                                                                aCCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccagatcgg                                     <  1:1040035‑M2/100‑65 (MQ=255)
                                                                 ccGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAAc                                    >  1:853684/1‑100 (MQ=255)
                                                                   gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccg                                  <  1:1760396‑M2/100‑68 (MQ=255)
                                                                   gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgagcgtcttatcaggcctacaaattcccgcaccctccg                                  <  1:1966709‑M2/100‑68 (MQ=255)
                                                                   gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacgatgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccg                                  <  1:1377719‑M2/100‑68 (MQ=255)
                                                                   gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCg                                  <  1:644379/100‑1 (MQ=255)
                                                                      gCCGGATAAGGCGCTCGCGCCGCATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCg                               >  1:2107075/1‑100 (MQ=37)
                                                                       ccGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtagg                              <  1:1243626‑M2/100‑72 (MQ=255)
                                                                       ccGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGa                              >  2:2528053/1‑100 (MQ=255)
                                                                       ccGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGa                              <  1:2379463/100‑1 (MQ=255)
                                                                          gATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGAttt                           <  2:1202123/100‑1 (MQ=255)
                                                                          gATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGAttt                           <  1:762439/100‑1 (MQ=255)
                                                                            tGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTg                         <  2:967517/100‑1 (MQ=255)
                                                                            tGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTg                         <  1:708125/100‑1 (MQ=255)
                                                                             gcggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGc                        <  2:1696513/100‑1 (MQ=255)
                                                                             cttccgatctcgcCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGc                        <  1:597688/90‑1 (MQ=255)
                                                                              cggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCa                       <  2:892307/100‑1 (MQ=255)
                                                                              cggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCa                       >  2:32012/1‑100 (MQ=255)
                                                                                gcgcGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAAt                     >  1:1204696/1‑100 (MQ=255)
                                                                                  gcgAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCg                   <  2:2387493/100‑1 (MQ=255)
                                                                                   cgAGCGCCTTATCCGGCaacggtgccagatgcctgatacgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccggataaggcg                  <  2:202685‑M2/100‑84 (MQ=255)
                                                                                      gcgcCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGt               <  1:1011112/100‑1 (MQ=255)
                                                                                        gcCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTa             >  2:925921/1‑100 (MQ=255)
                                                                                         ccTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTAt            <  1:506593/100‑1 (MQ=255)
                                                                                            tATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGt         <  2:140760/100‑1 (MQ=255)
                                                                                            tATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGt         >  2:1599982/1‑100 (MQ=255)
                                                                                            tATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACAGTCGATTTTGAAATCGATGTTATGGt         <  1:381247/100‑1 (MQ=255)
                                                                                             aTCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTc        >  2:130793/1‑100 (MQ=255)
                                                                                               ccGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcat      <  2:818572‑M2/100‑96 (MQ=255)
                                                                                               ccGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgca       >  1:1644080‑M2/1‑5 (MQ=255)
                                                                                               ccGGCTTACCGATCACAATACAATCAGTTCTTTTTTTTTTTCTTTTATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGTTGTTATGGTCGc      >  1:153767/1‑100 (MQ=255)
                                                                                                  gCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccgtccgtaggccggataaggcaattacgcggcatcc    <  1:419430‑M2/99‑98 (MQ=255)
                                                                                                  gCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccg   >  2:1616752‑M2/1‑2 (MQ=255)
                                                                                                   |                                                                                                   
CTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTC  >  NC_000913/4326281‑4326479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.