New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4450948 =NA (NA)6 (0.070) 5/164 NT NA noncoding (5/85 nt) REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4450978 = NA (NA)noncoding (35/85 nt) REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 128 total aligned reads displayed.

CAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC  >  NC_000913/4450849‑4451047
                                                                                                   |                                                                                                   
cAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAgg                                                                                                     >  2:147728/1‑100 (MQ=255)
cAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAACATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAgg                                                                                                     >  2:2008088/1‑100 (MQ=255)
  aaTCCACCCTTTACCTGCCTGATACCGCAAAGGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGcc                                                                                                   <  1:941972/100‑1 (MQ=255)
  aaTCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGcc                                                                                                   <  1:1001449/100‑1 (MQ=255)
    tCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAAATAAAAAAAAAAAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCg                                                                                                  <  1:1935457/99‑1 (MQ=255)
          cTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAgg                                                                                           >  2:1618989/1‑100 (MQ=255)
           tttACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGgc                                                                                          <  2:674308/100‑1 (MQ=255)
             tACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGgcgc                                                                                        <  2:2009187/100‑1 (MQ=255)
             tACCTGCCTGATACCGCAAAAGAAGAATTAGAAAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGgcgc                                                                                        <  1:2577389/100‑1 (MQ=255)
              acctacctGATACCGCAAAAGAAGAAAAAAAAAAAAAAAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATaa                                                                                             <  1:2107962/94‑1 (MQ=255)
              aCCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCt                                                                                       <  2:2047210/100‑1 (MQ=255)
               cctgcctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCt                                                                                       >  2:2509113/1‑99 (MQ=255)
               cctgcctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTc                                                                                      <  1:807301/100‑1 (MQ=255)
                 tgcctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCAGATGCCGAGTAGTAGGCCGGATAAGGAGCAcgc                                                                                    >  1:1843973/1‑100 (MQ=255)
                    ctgATACCGCAAAAGAAGCATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGCTTCGTAGGCGGGATAAGgcg                                                                                         >  1:2104649/1‑92 (MQ=255)
                    ctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGcgcc                                                                                 <  2:1915660/100‑1 (MQ=255)
                    ctgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGcgcc                                                                                 <  2:2536488/100‑1 (MQ=255)
                     tgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGcgccg                                                                                <  1:1158711/100‑1 (MQ=255)
                     tgATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGcgccg                                                                                <  2:1556348/100‑1 (MQ=255)
                      gatagagCAAAAGAAGAATTAAAGACGAAGAAAAAGATGGAGTAATGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCgcgc                                                                                  <  1:1266300/91‑1 (MQ=37)
                      gATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGcgccgc                                                                               >  2:780216/1‑100 (MQ=255)
                         aCCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTATGCCGGATAAGGCGCTCTCGCCGCAt                                                                             >  1:1673539/1‑99 (MQ=255)
                          ccGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATGCGGCGCGAGcgccttatcc                                                                           <  1:901048/100‑7 (MQ=38)
                           cGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCATGATGCCGAATCGTAGGACGGAGAAGGCGCCcgatgcgcat                                                                             >  1:2017149/1‑89 (MQ=255)
                           cGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTAGGCCTGATGCCGATTCGTAGGCCGGATGCGGCGCGAGcgccttatcc                                                                           <  1:2044211/99‑7 (MQ=37)
                            gCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGTGTATTGGAGGTTGCTATGCCTGATGCCGATGCGGAGGCCGGATAAGGCGCTCGCGCCGCATc                                                                            >  1:2005968/1‑97 (MQ=38)
                            gCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCgg                                                                         >  2:1566177/1‑100 (MQ=255)
                             ggtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGc                                                                        >  2:61041‑M1/71‑100 (MQ=255)
                             cAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGc                                                                        >  2:582500/1‑100 (MQ=255)
                             cAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAAGCGCTCGCGCCGCATCCGGc                                                                        <  1:1584405/100‑1 (MQ=255)
                             cAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATAGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGc                                                                        >  1:1592328/1‑100 (MQ=255)
                              gtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGCg                                                                       >  1:2178972‑M1/70‑100 (MQ=255)
                               aaaGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATGCGGCGCGAGCGCCTTATCCGGccn                                                                      <  1:1944834/100‑3 (MQ=25)
                                gtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAt                                                                     >  2:1207525‑M1/68‑100 (MQ=255)
                                gtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAt                                                                     >  1:348280‑M1/68‑100 (MQ=255)
                                aagaagAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAt                                                                     <  2:507698/100‑1 (MQ=255)
                                 agaagaATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATg                                                                    <  1:1302472/100‑1 (MQ=255)
                                 agaagaATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATg                                                                    >  2:1590654/1‑100 (MQ=255)
                                 agaagaATTAGAGAAGAAGAAAAAGATGGGGGATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATGCGGCGCGAGCGCCTTATCCGGcctac                                                                    <  1:239874/100‑5 (MQ=21)
                                  gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                   >  1:289258/1‑100 (MQ=255)
                                  gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                   <  1:136030/100‑1 (MQ=255)
                                  gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                   >  2:1488182/1‑100 (MQ=255)
                                     gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGc                                                                <  2:2151647/100‑1 (MQ=255)
                                         tAGGGAAGGTGAAAGATATGGGGCATTGAGTGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCAc                                                              <  2:2017161/98‑1 (MQ=25)
                                          agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACtca                                                           <  2:1750909/100‑3 (MQ=255)
                                           gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGaa                                                          >  2:1511967/1‑100 (MQ=255)
                                           gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGaa                                                          >  2:1199284/1‑100 (MQ=255)
                                             gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGc                                                        <  1:1470952/100‑1 (MQ=255)
                                                gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCACCCGGCGATGGTGCACTGAAGCCTg                                                     >  2:348275/1‑100 (MQ=255)
                                                 aagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGa                                                    <  2:13505/100‑1 (MQ=255)
                                                 aagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGa                                                    <  1:1106245/100‑1 (MQ=255)
                                                  agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGAt                                                   >  1:966066/1‑100 (MQ=255)
                                                  agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGAt                                                   >  1:426673/1‑100 (MQ=255)
                                                   gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                  <  2:111824/100‑1 (MQ=255)
                                                   gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                  >  1:2559799/1‑100 (MQ=255)
                                                   gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                  >  2:1861454/1‑100 (MQ=255)
                                                   gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                  <  1:303938/100‑1 (MQ=255)
                                                     aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg                                                >  1:1721723/1‑100 (MQ=255)
                                                       aaTATGGGGTATTGGGGGTTGCTATGCCGGATGCCGGTGCGTACGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTCACGCCTGATGCGAc                                              <  1:1653862/100‑1 (MQ=25)
                                                       aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc                                              <  2:461965/100‑1 (MQ=255)
                                                          atGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt                                           >  2:437261/1‑100 (MQ=255)
                                                            ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTATGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATGGTACACTGAAGCCTGATGCGACGCTTa                                         >  1:464927/1‑100 (MQ=255)
                                                            ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa                                         >  1:803768/1‑100 (MQ=255)
                                                            ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa                                         >  2:1287702/1‑100 (MQ=255)
                                                              ggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc                                       >  1:2490009/1‑100 (MQ=255)
                                                              ggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc                                       <  2:673358/100‑1 (MQ=255)
                                                               gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg                                      <  2:1462440/100‑1 (MQ=255)
                                                               gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg                                      >  2:2525100/1‑100 (MQ=255)
                                                                   tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc                                  <  1:601643/100‑1 (MQ=255)
                                                                    gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                 >  1:1492641/1‑100 (MQ=255)
                                                                     aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt                                >  2:2245536/1‑100 (MQ=255)
                                                                     aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt                                >  2:2245237/1‑100 (MQ=255)
                                                                     aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt                                <  1:276591/100‑1 (MQ=255)
                                                                      gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa                               >  2:1372293/1‑100 (MQ=255)
                                                                       ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt                              <  1:2409845/100‑1 (MQ=255)
                                                                       ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt                              >  1:2331158/1‑100 (MQ=255)
                                                                        gTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc                             <  2:76319/100‑1 (MQ=255)
                                                                         ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa                            <  2:1354525/100‑1 (MQ=255)
                                                                           gCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATg                          >  1:1928564/1‑100 (MQ=255)
                                                                            cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCAGCATCCGGCGATGGTGCCCTGAATCCTTGTGCGACGCTTACCGCGTCTTATCATGc                         >  1:1413260/1‑100 (MQ=37)
                                                                             tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc                        >  2:737678/1‑100 (MQ=255)
                                                                             tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc                        >  2:2245077/1‑100 (MQ=255)
                                                                              aTGCCTGATGCCGATTGGTACGACGGATACGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCt                       <  1:116781/100‑1 (MQ=25)
                                                                               tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAGGGTGCACTGAAGCCTGATGCGACGCTTACCGCGACTTATCATGCCTa                      >  1:953025/1‑100 (MQ=255)
                                                                                gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc                     >  1:524851/1‑100 (MQ=255)
                                                                                gCCTGACGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCTGGCGATGGTGCACTGAAGCCTGATTCGACGCTTACCGCGTCTTATCATGcc                        <  1:642227/97‑1 (MQ=255)
                                                                                 ccTGACGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt                    <  1:1282830/100‑1 (MQ=255)
                                                                                  cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTg                   <  1:2524279/100‑1 (MQ=255)
                                                                                   tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTgg                  <  2:314614/100‑1 (MQ=255)
                                                                                   tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTgg                  >  2:1737997/1‑100 (MQ=255)
                                                                                    gATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTggg                 <  2:2552950/100‑1 (MQ=255)
                                                                                      tGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg               <  1:547658/100‑1 (MQ=255)
                                                                                       gCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc              >  1:1900296/1‑100 (MQ=255)
                                                                                         gtgcaccatcGCCGGATGCGGCGCGAGCGCCTTATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc            <  1:932948‑M1/90‑1 (MQ=255)
                                                                                         cGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc            <  1:1793060/100‑1 (MQ=255)
                                                                                              ccatcGCCGGATGCGGCGCGAGCGCCTTATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt       <  1:400017‑M1/95‑1 (MQ=255)
                                                                                               gTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa      >  2:1794557/1‑100 (MQ=255)
                                                                                                tAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac     >  2:523289/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac   >  2:1767843/1‑100 (MQ=255)
                                                                                                  cGCCGGATGCGGCGCGAGCGCCTTATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac   <  1:2032762‑M1/99‑1 (MQ=255)
                                                                                                   |                                                                                                   
CAAATCCACCCTTTACCTGCCTGATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC  >  NC_000913/4450849‑4451047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.