New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4450948 =NA (NA)6 (0.070) 5/164 NT NA noncoding (5/85 nt) REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4450978 = NA (NA)noncoding (35/85 nt) REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences REP336 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 118 total aligned reads displayed.

AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGAC  >  NC_000913/4450879‑4451069
                                                                                                   |                                                                                           
gtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcgccggataaggcgctcgcgccgcatccggcg                                                                                             <  1:2032762‑M2/1‑1 (MQ=255)
gtgtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGCg                                                                                             >  1:2178972‑M1/70‑100 (MQ=255)
  gtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAt                                                                                           >  2:1207525‑M1/68‑100 (MQ=255)
  gtaaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAt                                                                                           >  1:348280‑M1/68‑100 (MQ=255)
  aagaagAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAt                                                                                           <  2:507698/100‑1 (MQ=255)
   agaagaATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATg                                                                                          >  2:1590654/1‑100 (MQ=255)
    gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGGCGCATCCGGCGATgg                                                                                         >  2:2552032/1‑100 (MQ=255)
    gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                                         >  1:289258/1‑100 (MQ=255)
    gaagaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATgg                                                                                         <  1:136030/100‑1 (MQ=255)
    aaagcgtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcgccggataaggcgctcgcgccgcatccggcGATgg                                                                                         <  1:400017‑M2/5‑1 (MQ=255)
      agaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTg                                                                                       <  1:1674832/100‑1 (MQ=255)
       gaaTTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGc                                                                                      <  2:2151647/100‑1 (MQ=255)
         gtgctcccagtaggcatgataagacgcggtaagcgtcgcatcaggcttcagtgcaccatcgccggataaggcgctcgcgccgcatccggcGATGGTGCAc                                                                                    <  1:932948‑M2/10‑1 (MQ=255)
           tAGGGAAGGTGAAAGATATGGGGCATTGAGTGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCAc                                                                                    <  2:2017161/98‑1 (MQ=25)
            agagAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACtca                                                                                 <  2:1750909/100‑3 (MQ=255)
             gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGaa                                                                                >  2:1511967/1‑100 (MQ=255)
             gagaAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGaa                                                                                >  2:1199284/1‑100 (MQ=255)
               gaagaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGc                                                                              <  1:1470952/100‑1 (MQ=255)
                  gaagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCACCCGGCGATGGTGCACTGAAGCCTg                                                                           >  2:348275/1‑100 (MQ=255)
                   aagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGa                                                                          <  1:1106245/100‑1 (MQ=255)
                   aagaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGa                                                                          <  2:13505/100‑1 (MQ=255)
                    agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGAt                                                                         >  1:426673/1‑100 (MQ=255)
                    agaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGAt                                                                         >  1:966066/1‑100 (MQ=255)
                     gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                                        >  1:2559799/1‑100 (MQ=255)
                     gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                                        <  1:303938/100‑1 (MQ=255)
                     gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                                        <  2:111824/100‑1 (MQ=255)
                     gaaAAATATGGGGTATTGAGGGTTGCTATGCCTGAGGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATg                                                                        <  1:376298/100‑1 (MQ=255)
                      acaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGc                                                                       <  2:2062794/98‑1 (MQ=255)
                       aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg                                                                      <  2:559178/100‑1 (MQ=255)
                       aaaaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCg                                                                      >  1:1721723/1‑100 (MQ=255)
                         aaTATGGGGTATTGGGGGTTGCTATGCCGGATGCCGGTGCGTACGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTCACGCCTGATGCGAc                                                                    <  1:1653862/100‑1 (MQ=25)
                         aaTATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGAc                                                                    <  2:461965/100‑1 (MQ=255)
                            atGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCt                                                                 >  2:437261/1‑100 (MQ=255)
                              ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTATGCCGGATAAGGCGCTCGCGCCGCATCCGGCAATGGTACACTGAAGCCTGATGCGACGCTTa                                                               >  1:464927/1‑100 (MQ=255)
                              ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa                                                               >  2:1088101/1‑100 (MQ=255)
                              ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa                                                               >  2:2427988/1‑100 (MQ=255)
                              ggggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTa                                                               >  2:1287702/1‑100 (MQ=255)
                                ggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc                                                             >  1:2490009/1‑100 (MQ=255)
                                ggTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAcc                                                             <  2:673358/100‑1 (MQ=255)
                                 gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg                                                            <  2:1462440/100‑1 (MQ=255)
                                 gTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACcg                                                            >  2:2525100/1‑100 (MQ=255)
                                     tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc                                                        <  1:601643/100‑1 (MQ=255)
                                     tGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTc                                                        >  1:189426/1‑100 (MQ=255)
                                      gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                                       >  2:1793069/1‑100 (MQ=255)
                                      gAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCt                                                       >  1:1492641/1‑100 (MQ=255)
                                       aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt                                                      <  1:276591/100‑1 (MQ=255)
                                       aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt                                                      >  2:2245237/1‑100 (MQ=255)
                                       aGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCtt                                                      >  2:2245536/1‑100 (MQ=255)
                                        gggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTa                                                     >  2:1372293/1‑100 (MQ=255)
                                         ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt                                                    <  2:1546997/100‑1 (MQ=255)
                                         ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt                                                    <  1:2409845/100‑1 (MQ=255)
                                         ggTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAt                                                    >  1:2331158/1‑100 (MQ=255)
                                          gTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATc                                                   <  2:76319/100‑1 (MQ=255)
                                           ttGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCa                                                  <  2:1354525/100‑1 (MQ=255)
                                              cTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCAGCATCCGGCGATGGTGCCCTGAATCCTTGTGCGACGCTTACCGCGTCTTATCATGc                                               >  1:1413260/1‑100 (MQ=37)
                                               tATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGcc                                              >  2:737678/1‑100 (MQ=255)
                                                aTGCCTGATGCCGATTGGTACGACGGATACGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCt                                             <  1:116781/100‑1 (MQ=25)
                                                 tGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGAGGGTGCACTGAAGCCTGATGCGACGCTTACCGCGACTTATCATGCCTa                                            >  1:953025/1‑100 (MQ=255)
                                                  gCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAc                                           >  1:524851/1‑100 (MQ=255)
                                                  gCCTGACGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCTGGCGATGGTGCACTGAAGCCTGATTCGACGCTTACCGCGTCTTATCATGcc                                              <  1:642227/97‑1 (MQ=255)
                                                   ccTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt                                          >  2:1331659/1‑100 (MQ=255)
                                                   ccTGACGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACt                                          <  1:1282830/100‑1 (MQ=255)
                                                    cTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTg                                         <  1:2524279/100‑1 (MQ=255)
                                                     tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTgg                                        <  2:314614/100‑1 (MQ=255)
                                                     tGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTgg                                        >  2:1737997/1‑100 (MQ=255)
                                                        tGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAg                                     <  1:547658/100‑1 (MQ=255)
                                                         gCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc                                    <  1:916909/100‑1 (MQ=255)
                                                         gCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGc                                    >  1:1900296/1‑100 (MQ=255)
                                                           gtgcaccatcGCCGGATGCGGCGCGAGCGCCTTATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc                                  <  1:932948‑M1/90‑1 (MQ=255)
                                                           cGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAc                                  <  1:1793060/100‑1 (MQ=255)
                                                              ttCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCt                               >  1:1192901/1‑100 (MQ=255)
                                                                ccatcGCCGGATGCGGCGCGAGCGCCTTATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCttt                             <  1:400017‑M1/95‑1 (MQ=255)
                                                                 gTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTa                            >  2:1794557/1‑100 (MQ=255)
                                                                  tAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac                           >  2:523289/1‑100 (MQ=255)
                                                                  atcgccggatgcggcgcgagcgccttatccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTac                           >  2:1207525‑M2/34‑100 (MQ=255)
                                                                    ggCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac                         >  2:1767843/1‑100 (MQ=255)
                                                                    cGCCGGATGCGGCGCGAGCGCCTTATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTacac                         <  1:2032762‑M1/99‑1 (MQ=255)
                                                                     gccggatgcggcgcgagcgccttatccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc                        >  2:61041‑M2/31‑100 (MQ=255)
                                                                     gccggatgcggcgcgagcgccttatccggcGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc                        >  1:1998207‑M2/31‑100 (MQ=255)
                                                                     GCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAcc                        >  2:887712‑M1/1‑100 (MQ=255)
                                                                       CGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgg                      >  2:1898226‑M1/1‑100 (MQ=255)
                                                                       CGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgg                      >  2:347734‑M1/1‑100 (MQ=255)
                                                                       CGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgg                      <  2:1341737‑M1/100‑1 (MQ=255)
                                                                         GATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCgggg                    >  1:1016174‑M1/1‑100 (MQ=255)
                                                                          ATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCggggg                   <  2:2387891‑M1/100‑1 (MQ=255)
                                                                            aaGGCGCTCGCGCCGCATCCGGCGAGGGTACACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGaa                 <  1:2000231/100‑1 (MQ=255)
                                                                             aGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACTCCGGGGGaaa                >  1:1698603/1‑100 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGGCGATGGTGCACTGTAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAAcc              <  1:250473/99‑1 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCa             <  1:2407021/100‑1 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCa             <  2:650406/100‑1 (MQ=255)
                                                                                   tCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATga          <  2:871984/100‑1 (MQ=255)
                                                                                   tCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATga          >  2:2063632/1‑100 (MQ=255)
                                                                                    cgcgCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgac         <  2:1647969/100‑1 (MQ=255)
                                                                                    cgcgCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgac         <  1:10442/100‑1 (MQ=255)
                                                                                     gcgcCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacg        <  1:2114908/100‑1 (MQ=255)
                                                                                      cgccgcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacga       <  2:151612/100‑1 (MQ=255)
                                                                                      cgccgcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacga       >  2:1559585/1‑100 (MQ=255)
                                                                                       gccgcATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATgacgac      >  2:761876/1‑100 (MQ=255)
                                                                                           cATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgaccgac  >  1:802949/1‑100 (MQ=255)
                                                                                           cATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGAcgaccgac  <  1:784320/100‑1 (MQ=255)
                                                                                                   |                                                                                           
AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCATGACGACCGAC  >  NC_000913/4450879‑4451069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.