New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 49692 =84 (0.920)13 (0.160) 6/158 NT 16.1% intergenic (+61/‑131) kefC/folA potassium:proton antiporter/dihydrofolate reductase
?NC_000913 49723 = 61 (0.750)intergenic (+92/‑100) kefC/folA potassium:proton antiporter/dihydrofolate reductase

Only 100 of 120 total aligned reads displayed.

AACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCTTTACGTA  >  NC_000913/49593‑49788
                                                                                                   |                                                                                                
nagatttcccgataaaagaaattgtcgccactatacgtaaagcgtaaaccgacgtcgactggcgcgcggaggatgtggaggaagattttatattctgctg                                                                                                  <  1:1171108‑M1/1‑1 (MQ=255)
gagatttcccgataaaaaaaattgtcgccactatacgtaaagcgtaaaccgtcgtggactggtgcgaggatgatgttgaggaaaattttatattctgctg                                                                                                  >  1:1369877‑M1/100‑100 (MQ=255)
gagatttcccgataaaaaaaattgtcgccactatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctg                                                                                                  >  2:209074‑M1/100‑100 (MQ=255)
aaCATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATgcg                                                                                                  <  1:1532596/100‑1 (MQ=255)
 agatttcccgataaaaaaaattgtcgccactatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctgg                                                                                                 >  2:120657‑M1/99‑100 (MQ=255)
 aCATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATgcgg                                                                                                 <  1:449179/100‑1 (MQ=255)
  cATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATgcggc                                                                                                <  1:1900640/100‑1 (MQ=255)
   aTGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATgcggcg                                                                                               <  2:56943/100‑1 (MQ=255)
    tttcccgataaaaaaaattgtcgccactatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGa                                                                                              <  1:2010903‑M1/5‑1 (MQ=255)
    tGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGa                                                                                              >  2:1384859/1‑100 (MQ=255)
     ggCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAg                                                                                             <  2:578017/100‑1 (MQ=255)
      gCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGt                                                                                            <  1:947072/100‑1 (MQ=255)
       cccgataaaaaaaattgtcgccactatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTc                                                                                           <  2:2135579‑M1/8‑1 (MQ=255)
       cccgataaaaaaaattgtcgccactatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTc                                                                                           <  1:2148937‑M1/8‑1 (MQ=255)
       cccgagaaaaaaaatggtcgccaccatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTc                                                                                           >  2:674732‑M1/93‑100 (MQ=255)
       cGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTc                                                                                           >  2:1152136/1‑100 (MQ=255)
        ggATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTcc                                                                                          >  1:903997/1‑100 (MQ=255)
        ggATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTcc                                                                                          <  1:1919353/100‑1 (MQ=255)
        ccgataaaaaaaattgtcgccactatacgtaaagcgtaaaccgtagtcgattggtgcgaggatgctgttgaggaaaattttatattgtgctGGCGAGTcc                                                                                          <  2:423915‑M1/9‑1 (MQ=255)
         gATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACGGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCa                                                                                         >  2:764359/1‑100 (MQ=255)
           tGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAgg                                                                                       <  1:1922175/100‑1 (MQ=255)
           cgatctggAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAgg                                                                                       <  2:1171228/94‑1 (MQ=255)
             aaCCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGga                                                                                     >  1:712749/1‑100 (MQ=255)
              aCCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATTCAGCGAGTCCAggggg                                                                                    >  2:2327404/1‑98 (MQ=255)
               ccGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGgaga                                                                                   >  2:1780149/1‑100 (MQ=255)
                cGGGAACGAAACCCTCAGCCTAATCAAGAGTGTCCTTAATCACACTTTACAGGTAACTGTTTGTCTTTGTGTCTTTGTTATGCGGCGAGTCCAggt                                                                                      <  1:532362/96‑2 (MQ=255)
                 ggAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAggagatcg                                                                                 >  1:1171224/1‑94 (MQ=255)
                    aacgaaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCg                                                                              >  1:713481/1‑100 (MQ=255)
                      cgaaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTg                                                                            <  1:1166705/100‑1 (MQ=255)
                        aaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGa                                                                          >  2:324247/1‑100 (MQ=255)
                        aaacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTATCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGa                                                                          <  1:1384851/100‑1 (MQ=255)
                         cgccactatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGAc                                                                         <  1:551636‑M1/26‑1 (MQ=255)
                         aacCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGAc                                                                         <  1:158387/100‑1 (MQ=255)
                            ccTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAGCTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCg                                                                      <  1:2535647/100‑1 (MQ=255)
                            ccTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCg                                                                      <  1:1893778/100‑1 (MQ=255)
                            cactatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTCg                                                                      >  2:1600523‑M1/72‑100 (MQ=255)
                             cTCATCCTAATAATGAGTGTCGTAAATCACTCTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCg                                                                      <  1:1485955/99‑1 (MQ=255)
                              tCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGcc                                                                    <  1:1524494/100‑1 (MQ=255)
                              ctatacgtaaagcgtaacccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTCGcc                                                                    >  1:1121287‑M1/70‑100 (MQ=255)
                              ctatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTCGcc                                                                    >  1:1209236‑M1/70‑100 (MQ=255)
                              ctatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTCGcc                                                                    >  1:959733‑M1/70‑100 (MQ=255)
                               tatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTCGCca                                                                   >  2:35579‑M1/69‑100 (MQ=255)
                               tatacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTCGCca                                                                   >  1:1801336‑M1/69‑100 (MQ=255)
                               cATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGcc                                                                    >  2:466531/1‑99 (MQ=255)
                                atacgtaaagcgtaacccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcag                                                                  >  1:119732‑M1/68‑100 (MQ=255)
                                atacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcag                                                                  >  1:2092420‑M1/68‑100 (MQ=255)
                                aTCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcag                                                                  <  1:1488891/100‑1 (MQ=255)
                                 tacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTTGCcagc                                                                 >  2:1924507‑M1/67‑100 (MQ=255)
                                 tacgtaaagcgtaaaccgtcgtcgactggtgcgaggatgatgttgaggaaaattttatattctgctGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcagc                                                                 >  2:1406606‑M1/67‑100 (MQ=255)
                                  ccTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcagca                                                                >  1:2205027/1‑100 (MQ=255)
                                   cTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCcagcag                                                               >  1:48372/1‑100 (MQ=255)
                                   cTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGAGGCGAGTCCAGGGCGAGAGCGTGGACTCGCcagca                                                                >  1:765563/1‑99 (MQ=255)
                                     aataaAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGaa                                                             <  2:2127902/100‑1 (MQ=255)
                                        aaaGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAatat                                                          >  1:145114/1‑100 (MQ=255)
                                         aaGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTGCTGTTTCATTGTAATGCGGCGAGTCTAGGGAGAGAGCGTTGACTCGCCAGCAGAatat                                                          <  1:2400767/99‑1 (MQ=255)
                                          agagTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCTGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCTGAATATaa                                                        >  2:763839/1‑100 (MQ=255)
                                           gagTGACGTAAATCACACTTTACAGCTAACTGGTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATaaa                                                       <  2:2162435/100‑1 (MQ=255)
                                             gTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTTTTTGTATTGCGGCGAGTCCAGGGAGAGAGCGTGTACTCGCCAGCAGAATATAAAAt                                                     >  1:1762433/1‑100 (MQ=255)
                                              tGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAAtt                                                    >  2:1483103/1‑100 (MQ=255)
                                               gACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAAttt                                                   >  2:571486/1‑100 (MQ=255)
                                               gACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAAttt                                                   >  1:1419325/1‑100 (MQ=255)
                                                 cGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTc                                                 <  2:1816963/100‑1 (MQ=255)
                                                  gTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTcc                                                <  2:1583583/100‑1 (MQ=255)
                                                  gTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTcc                                                >  1:31606/1‑100 (MQ=255)
                                                   tAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCt                                               >  1:1553969/1‑100 (MQ=255)
                                                    aaaTCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTc                                              <  1:2538621/100‑1 (MQ=255)
                                                    aaaTAATACTTTACAGCTAACTTTTTGTTTTTGTTTCATTGTAATGCGGAGAGTTTAGGAAGAGTGCTTTTACTCGAAAAAAAAAAAAAAAATTTTc                                                 <  1:2364919/97‑1 (MQ=255)
                                                     aaTCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCa                                             >  2:237469/1‑100 (MQ=255)
                                                        cacaCTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAAca                                          <  1:1780140/100‑1 (MQ=255)
                                                          cacTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAAcatc                                        >  2:1715941/1‑100 (MQ=255)
                                                          cacTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAAcatc                                        >  1:153870/1‑100 (MQ=255)
                                                           acTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAAcatca                                       <  1:1697902/100‑1 (MQ=255)
                                                            cTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAAcatcat                                      >  1:1769332/1‑100 (MQ=255)
                                                              ttACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATcc                                    >  1:468673/1‑100 (MQ=255)
                                                               tACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCt                                   >  2:2282615/1‑100 (MQ=255)
                                                               tACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGCCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCt                                   <  1:1817299/100‑1 (MQ=255)
                                                                 cagataagcgtttgtttTTGTTTCATTCTATTGCGGAGAGTCCCGGGAGCGGGTGTGCCCTCGCCAGACGCATCTATAATATTCCTCAAca                                          >  1:2521601/10‑91 (MQ=255)
                                                                  aGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGc                                >  1:1753124/1‑100 (MQ=255)
                                                                   gCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCa                               >  1:525907/1‑100 (MQ=255)
                                                                    cTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCAc                              <  1:2129953/100‑1 (MQ=255)
                                                                          gtttgtttTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTcg                        <  2:2430662/100‑1 (MQ=255)
                                                                          gtttgtttTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTcg                        <  2:1045821/100‑1 (MQ=255)
                                                                          gtttgtttTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTcg                        <  2:533218/100‑1 (MQ=255)
                                                                                 tttgtttCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACgg                 <  2:143994/100‑1 (MQ=255)
                                                                                    gtttCATTGTAATGCGGCGAGTCCAGGGAGGGATCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGttt              >  1:1706237/1‑100 (MQ=255)
                                                                                    gtttCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGttt              >  1:2282106/1‑100 (MQ=255)
                                                                                     tttCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTa             >  2:796926/1‑100 (MQ=255)
                                                                                      ttCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTAc            <  1:2515362/100‑1 (MQ=255)
                                                                                       tCATTGTAATGCGGCGAAACCAGGACGAGAGCGTAGACTCGACATCAGAATATAAAATTTTCATCAGCATCATCCTCGCACCGGTCGACAACGCATTACg           >  1:1685811/1‑100 (MQ=255)
                                                                                        cATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCATAATGTAAAATTTTCCTCATCATCAGCCTCGCACCAGTCGACGACGGTTTACGc          <  2:730570/100‑1 (MQ=255)
                                                                                        cATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGc          >  1:678219/1‑100 (MQ=255)
                                                                                        cATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGc          <  2:1553978/100‑1 (MQ=255)
                                                                                         aTTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCt         >  1:889008/1‑100 (MQ=255)
                                                                                            gTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCTTTa      <  2:574971/100‑1 (MQ=255)
                                                                                             tAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCTTTAc     >  1:1961603/1‑100 (MQ=255)
                                                                                              aaTGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCTTTACg    >  2:401774/1‑100 (MQ=255)
                                                                                              aaTGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCTTTACg    >  1:2411116/1‑100 (MQ=255)
                                                                                               aTGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCTTTACGt   >  1:991222/1‑100 (MQ=255)
                                                                                                tGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCTTTACGta  >  2:544848/1‑100 (MQ=255)
                                                                                                tGCGGCGAGTCCAGGGAGAGAGCGTGGACAAGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCTTTACGta  >  1:835143/1‑100 (MQ=255)
                                                                                                   |                                                                                                
AACATGGCGGATGAACCGGAAACGAAACCCTCATCCTAATAAAGAGTGACGTAAATCACACTTTACAGCTAACTGTTTGTTTTTGTTTCATTGTAATGCGGCGAGTCCAGGGAGAGAGCGTGGACTCGCCAGCAGAATATAAAATTTTCCTCAACATCATCCTCGCACCAGTCGACGACGGTTTACGCTTTACGTA  >  NC_000913/49593‑49788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.