| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1208471 = | 74 (0.810) | 15 (0.180) | 5/162 | NT | 20.4% | coding (340/414 nt) | tfaP | e14 prophage; uncharacterized protein |
| ? | NC_000913 | 1208500 = | 50 (0.600) | coding (369/414 nt) | tfaP | e14 prophage; uncharacterized protein | |||||
Only 100 of 121 total aligned reads displayed.
TAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCA > NC_000913/1208401‑1208599 | tAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTgcg < 2:537241/100‑1 (MQ=255) agataccagcaccgcgccggatgtcatctggcctgaactgccggaggcgtaggccattcaatatctggcGCACTGGAACTGGTTGATACATCCAGTgcg‑c > 1:1843449‑M1/70‑100 (MQ=255) gataccagcaccgcgccggatgtcatctggcctgaactgccggaggcgtaggccattcaatatctggcGCACTGGAACTGGTTGATACATCCAGTGCG‑cc > 1:672993‑M1/69‑100 (MQ=255) ataccagcaccgcgccggatgtcatctggcctgaactgccggaggagtaggccattcaatatctggacGCACTGGAGCTGGTCGATACTTCCAGTGCG‑cc > 1:680011‑M1/69‑100 (MQ=255) ataccagcaccgcgccggatgtcatctggcctgaactgccggaggagtaggccattcaatatctggacGCACTGGAGCTGGTCGATACTTCCAGTGCG‑cc > 2:1492220‑M1/69‑100 (MQ=255) taccagcaccgcgccggatgtcatctggcctgaactgccggaggagtaggccattcaatatctggacGCACTGGAGCTGGTCGATACTTCCAGTGCG‑CCa > 2:359040‑M1/68‑100 (MQ=255) gCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTgcg < 1:1237281/96‑1 (MQ=255) gCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAg > 1:788353/1‑100 (MQ=255) accagcaccgcgccggatgtcatctggcctgaactgccggaggagtaggccattcaatatctggacGCACTGGAGCTGGTCGATACTTCCAGTGCG‑CCAg > 2:1947993‑M1/67‑100 (MQ=255) cTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGa < 2:1619029/100‑1 (MQ=255) accagcaccgcgccggatgtcatctggcctgaactgccggaggcgtaggccattcaatatctggcGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGa > 2:590502‑M1/66‑100 (MQ=255) tGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCATTGGAACTGGTTGATACATCCAGTGCG‑CCAGat > 1:743061/1‑100 (MQ=255) tGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGat < 2:2326598/100‑1 (MQ=255) gCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGata < 2:502049/100‑1 (MQ=255) cATTGGAAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGatat < 2:1098874/100‑1 (MQ=255) ccgcgccggatgtcatctggcctgaactgccggaggcgtaggccattcaatatctggaaGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGa > 2:566879‑M1/60‑100 (MQ=255) ccgcgccggatgtcatctggcctgaactgccggaggcgtaggccattcaatatctggaaGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGa > 2:1694902‑M1/60‑100 (MQ=255) gggAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGaa > 2:1389546/1‑100 (MQ=255) gggAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGaa > 2:496655/1‑100 (MQ=255) aaGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATgg < 2:1047742/100‑1 (MQ=255) aaGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATgg < 2:423206/100‑1 (MQ=255) gACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGcc > 1:2253594/1‑100 (MQ=255) gACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGcc < 2:446660/100‑1 (MQ=255) gACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCT‑GATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGc > 1:1459838/1‑98 (MQ=255) cTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTa > 1:290148/1‑100 (MQ=255) cTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTa > 2:2141909/1‑100 (MQ=255) tAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGACCTGGTTGATACATCCAGTGCG‑CCAGATACTGAATGGCCTagg < 2:1749344/100‑3 (MQ=255) aaaGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGc < 1:363020/100‑1 (MQ=255) aagaagATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGcn < 1:1872458/100‑2 (MQ=255) aagaagATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGcc < 2:410658/100‑1 (MQ=255) ataTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCT‑CCAGATATTGAATGGCCTACGCCTCCg < 1:344365/98‑1 (MQ=255) aTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGc < 2:82740/100‑1 (MQ=255) aTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGc < 2:2021323/100‑1 (MQ=255) aTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGc < 2:343337/100‑1 (MQ=255) aTGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGc < 2:753632/100‑1 (MQ=255) gAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCGAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAg < 1:1389538/100‑1 (MQ=255) gAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAg < 2:2324209/100‑1 (MQ=255) gAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAg < 2:1671945/100‑1 (MQ=255) gCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGCAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCATACGCCTCCGGCAGtt > 1:1789035/1‑100 (MQ=255) cTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTc < 2:2392319/100‑1 (MQ=255) tGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCAGTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCA < 1:1412234‑M1/100‑1 (MQ=255) aaaCTATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGG < 2:809745‑M1/100‑1 (MQ=255) aaaCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGG > 2:2534027‑M1/1‑100 (MQ=255) aaCAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGC > 1:1439799‑M1/1‑100 (MQ=255) tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGAt < 1:2456601/100‑1 (MQ=255) tataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGAt > 1:2365697/1‑100 (MQ=255) ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATg > 1:1077500/1‑100 (MQ=255) ataATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATg < 1:965194/100‑1 (MQ=255) taATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGa > 1:1050263/1‑100 (MQ=255) tgtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATcc < 2:898468/100‑1 (MQ=255) tgtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATcc < 2:774296/100‑1 (MQ=255) gtgGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCg > 1:1756106/1‑100 (MQ=255) tcaatatctggcgcactggatgtatcaaccagttccagtgctT‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCgg > 2:1694902‑M2/43‑100 (MQ=255) tcaatatctggcgcactggatgtatcaaccagttccagtgctT‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCgg > 2:566879‑M2/43‑100 (MQ=255) ggATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGG < 2:1832054‑M1/100‑1 (MQ=255) caatatctggcgcactggatgtatcaaccagttccagtgcG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCgg > 1:332332‑M2/41‑98 (MQ=255) aTCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTg < 2:1868303/100‑1 (MQ=255) tctggcgcactggatgtatcaaccagttccagtgcG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGt > 2:590502‑M2/36‑100 (MQ=255) cTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGt > 1:2319884/1‑100 (MQ=255) cTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGt > 1:2188167/1‑100 (MQ=255) tGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTa < 1:6605/100‑1 (MQ=255) ctggcgcactggaagtatcgaccagctccagtgcGTCCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGt > 1:689511‑M2/35‑100 (MQ=255) ctggcgcactggaagtatcgaccagctccagtgcGTCCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGt > 2:1947993‑M2/35‑100 (MQ=255) tggcgcactggaagtatcgaccagctccagtgcGTCCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTa > 2:1599711‑M2/34‑100 (MQ=255) ggAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATAGTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTAt < 1:403128/100‑1 (MQ=255) ggcgcactggatgtatcaaccagttccagtgcG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATc > 1:672993‑M2/33‑100 (MQ=255) ggcgcactggatgtatcaaccagttccagtgcG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATc > 1:2347632‑M2/33‑100 (MQ=255) ggcgcactggaagtatcgaccagctccagtgcGTCCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTAt > 2:1492220‑M2/33‑100 (MQ=255) ggcgcactggaagtatcgaccagctccagtgcGTCCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTAt > 1:680011‑M2/33‑100 (MQ=255) gAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATc > 1:1740008/1‑100 (MQ=255) CACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGTGGTGCTGGTATCTGtt < 2:2381023‑M1/100‑1 (MQ=255) ACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTg > 2:1890012‑M1/1‑100 (MQ=255) CTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGc > 1:411097‑M1/1‑100 (MQ=255) CTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATATGTTGc > 1:1770306‑M1/1‑100 (MQ=255) TGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGcc < 2:1015175‑M1/100‑1 (MQ=255) ggaagtatcgaccagctccagtgcG‑CCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCg > 1:98094‑M2/25‑100 (MQ=255) GGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCg < 2:2023603‑M1/100‑1 (MQ=255) GAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGt < 1:2532185‑M1/100‑1 (MQ=255) AACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTc > 1:2035028‑M1/1‑100 (MQ=255) ggtcgatacTTCCAGTGCG‑CCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTTactgcaacagataccagcaccg < 1:1248165‑M1/96‑23 (MQ=255) gTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgc < 2:1645194/100‑1 (MQ=255) gATACTTCCAGTGCG‑CCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGacggcaacagataccagcaccgcgcc < 2:2238431‑M1/100‑27 (MQ=255) gATACTTCCAGTGCG‑CCAGATATTGAATGGCCTACTCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGacggcaacagataccagcaccgcgcc < 1:818926‑M1/100‑27 (MQ=255) gATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGacggcaacagataccagcaccgcgcc < 1:1947810‑M1/100‑27 (MQ=255) gATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGacggcaacagataccagcaccgcgcc < 2:896482‑M1/100‑27 (MQ=255) gATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACcgcg > 1:1996943/1‑98 (MQ=38) aTACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGacggcaacagataccagcaccgcgccg < 1:1992998‑M1/100‑28 (MQ=255) ttcATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCaa > 2:1743838/3‑100 (MQ=25) tACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCaa > 2:2210246/1‑100 (MQ=38) acttccaGTGCG‑CCAGATATTGAATGGCCTACTCCGCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGacggcaacagatacaagcaccgcgccgga < 1:1125805‑M1/97‑30 (MQ=255) cATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATg < 1:1608848/100‑1 (MQ=35) aTCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGacggcaacagataccagcaccgcgccggatg < 2:793942‑M1/100‑32 (MQ=255) aTCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGt < 2:2169127/100‑1 (MQ=35) aTCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGt < 1:2210231/100‑1 (MQ=35) ccagtgcG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTaa < 2:856376‑M2/93‑1 (MQ=255) agtgcG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATc > 2:1583424‑M2/6‑100 (MQ=255) gtgcG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATc > 2:926449‑M2/5‑99 (MQ=255) gcG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAg > 2:1644344‑M2/3‑100 (MQ=255) cG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGc > 2:2315271‑M2/2‑100 (MQ=255) g‑cCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAttcaatatctggcgcactggatgtatcaaccagttccagtgcttccagataatccagcc > 2:1368404‑M1/1‑41 (MQ=255) | TAAGGCTGCATTGGGAAGACTTAAAGAAGATGAGCTGAAACAATATAATTTGTGGCTGGATTATCTGGAAGCACTGGAACTGGTTGATACATCCAGTGCG‑CCAGATATTGAATGGCCTACGCCTCCGGCAGTTCAGGCCAGATGACATCCGGCGCGGTGCTGGTATCTGTTGCCGTCACCGCGTCAATGTAATCCAGCA > NC_000913/1208401‑1208599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |