New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 462212391 (0.990)3 (0.030) 3/168 NT 3.4% coding (355/1332 nt) yjjJ putative protein kinase
?NC_000913 = 4622142 87 (1.010)coding (374/1332 nt) yjjJ putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 103 total aligned reads displayed.

GCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT  >  NC_000913/4622043‑4622241
                                                                                                   |                                                                                                   
    aGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCcgcg                                                                                                 >  2:1953963‑M2/1‑96 (MQ=255)
      aTGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCa                                                                                               <  1:2128746/100‑1 (MQ=255)
       tGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTACGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCaa                                                                                              <  2:2459571/100‑1 (MQ=255)
        ggCGACGCACAGTGGTTTCATGGTTTGCCCTGGTCTTTGCCCCATCAACGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAAc                                                                                             <  2:2064634/100‑1 (MQ=255)
         gCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACt                                                                                            >  2:144573/1‑100 (MQ=255)
          cgacgaACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTg                                                                                           <  1:1794766/100‑1 (MQ=255)
          cgacgaACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTg                                                                                           >  1:85576/1‑100 (MQ=255)
           gacgaACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGa                                                                                          >  1:1985287/1‑100 (MQ=255)
              gaACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATc                                                                                       <  2:416698/100‑1 (MQ=255)
                aCAGTGGTTTGATGGTTTGCCATGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCCGGAAGTTAGCCGCGCAACTGAATctg                                                                                     >  1:2478213/1‑100 (MQ=255)
                   gTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATctgact                                                                                  >  1:468740/1‑100 (MQ=255)
                     ggTTTTATGGTTTGCCCTGGTATTTTTCCGGTCTACGGCCGCAGGGCTTTTGAGGGAGCGCGTGGGGAAGGAAGTTAGCAGCGCCACTCACTctgcc                                                                                   <  1:1119627/97‑3 (MQ=255)
                       tttGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACtgatg                                                                              <  1:198045/100‑1 (MQ=255)
                       tttGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACtgatg                                                                              <  2:1250499/100‑1 (MQ=255)
                         tGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTgatgat                                                                            >  2:1594434/1‑100 (MQ=255)
                          gATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGata                                                                           >  2:686646/1‑100 (MQ=255)
                            tGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGAtata                                                                         >  2:1875945/1‑100 (MQ=255)
                             ggTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATAc                                                                        >  2:1923360/1‑100 (MQ=255)
                              gTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACg                                                                       <  1:1344737/100‑1 (MQ=255)
                                ttGCCCTGGTATTTGCCCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGCCTGATGATATACGtc                                                                     <  1:896301/100‑1 (MQ=255)
                                  gcacTGGAATTTGACCGATATCCGACCGCAGAGCTTTTCAGGGCGCGCGAGGGGCAGTAAGTTAGCCGCGCAACTGAATCTGACTGAGGATAGACGtctc                                                                   >  1:2424772/4‑100 (MQ=255)
                                  gCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGtctc                                                                   <  1:1942393/100‑1 (MQ=255)
                                  gCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGtctc                                                                   >  1:1374798/1‑100 (MQ=255)
                                   cccTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGtctc                                                                   >  2:1102175/1‑99 (MQ=255)
                                     cTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTgg                                                                >  1:833567/1‑100 (MQ=255)
                                      nggTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGc                                                               >  1:24089/2‑100 (MQ=255)
                                        gTATTTGATCGATTTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAAGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAg                                                             <  2:2155742/100‑1 (MQ=255)
                                          aTTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGga                                                           >  2:874076/1‑100 (MQ=255)
                                          aTTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGga                                                           <  1:974424/100‑1 (MQ=255)
                                            ttGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGgaag                                                         >  2:511306/1‑100 (MQ=255)
                                            ttGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGgaag                                                         <  1:1472395/100‑1 (MQ=255)
                                             tGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGgaaga                                                        >  1:221740/1‑100 (MQ=255)
                                              gACTGATCTCCGACCGCAGATCTTTTTATGGCGCGCGTGGTGCAGTAAGTTAGACGCGCAACTGAATATGACTGTTTTTATACGTCTCTGGCAGgaaga                                                        >  1:272206/1‑99 (MQ=255)
                                               aCCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGaagaag                                                      <  2:777004/100‑1 (MQ=255)
                                                ccGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGAGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAagaaga                                                     >  1:1385623/1‑100 (MQ=255)
                                                 cGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGTGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAagaaga                                                     >  1:895805/1‑99 (MQ=255)
                                                  gATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGAtg                                                   >  1:1898826/1‑100 (MQ=255)
                                                  gATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGAtg                                                   >  1:609985/1‑100 (MQ=255)
                                                  gATCTCCGACCGCAGGACTTTTTAGGGTGCGAGTGGGGCAGGAAGTTAGCCGCGCAACTTAATCTGACTGATGATATACGTCTCTGGCAGgaagaa                                                       >  1:231309/1‑96 (MQ=255)
                                                   ctctcCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGAtgt                                                  <  2:1605064/99‑1 (MQ=255)
                                                    tctcCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGAtgtg                                                 <  1:1907652/100‑1 (MQ=255)
                                                     ctcCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGATGAAGATGTGc                                                <  2:2463942/100‑1 (MQ=255)
                                                     ctcCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGc                                                <  1:2553766/100‑1 (MQ=255)
                                                     ctcCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGc                                                >  2:365032/1‑100 (MQ=255)
                                                     ctcCGACCGCAGGCCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGAtgtag                                                >  1:1605055/1‑98 (MQ=255)
                                                      tcCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGct                                               >  2:2331902/1‑100 (MQ=255)
                                                      tcCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGct                                               >  2:1241477/1‑100 (MQ=255)
                                                      tcCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGct                                               >  2:1933166/1‑100 (MQ=255)
                                                       ccGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGctc                                              <  2:670508/100‑1 (MQ=255)
                                                       ccGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGctc                                              >  2:1802606/1‑100 (MQ=255)
                                                        cGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGctct                                             <  2:1042274/100‑1 (MQ=255)
                                                        cGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGctct                                             >  2:794806/1‑100 (MQ=255)
                                                             gCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGc                                         <  1:2274908/99‑1 (MQ=255)
                                                              cAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGccc                                       <  1:2492036/100‑1 (MQ=255)
                                                              cAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGccc                                       <  2:2334893/100‑1 (MQ=255)
                                                              cAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGccc                                       >  1:1106713/1‑100 (MQ=255)
                                                              cAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGccc                                       <  2:2473606/100‑1 (MQ=255)
                                                                  gCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGAc                                   >  2:638865/1‑100 (MQ=255)
                                                                  gCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGAc                                   >  2:1926695/1‑100 (MQ=255)
                                                                  gCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGAc                                   >  1:1498144/1‑100 (MQ=255)
                                                                  gCTTTTTAGGGCGCGCGTGGGGCACGCAGTTACCCGCGCAACAGCATCCGACTGATGAAACACGCCTCTCACAGTCAGAAGATGTGCTCTACTccc                                       >  1:203289/1‑96 (MQ=255)
                                                                   cTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCcgcgccctaaaaagccctgcggtcggagatcggtgaaataccagggcaaaccatcaaaccactgttc                                  <  1:1821178‑M2/100‑68 (MQ=255)
                                                                   cTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGAcc                                  >  2:1954018/1‑100 (MQ=255)
                                                                    tttttAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCg                                 <  2:952257/100‑1 (MQ=255)
                                                                     ttttAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGGAGAAGATGTGCTCTACGCCCTGACCGt                                >  2:1287432/1‑100 (MQ=255)
                                                                     ttttAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGt                                >  1:490325/1‑100 (MQ=255)
                                                                       ttAGGGCGCGCGTGGGGCAGGAAGTTAGCcgcggcctaaaaagccctgcggtcggagctcggtcaaataccatggcaaaccatcaaaccactgttcgtc                               <  1:2134916‑M2/99‑71 (MQ=255)
                                                                       ttAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGCATCTGACTGATGATATACGTCTCTGGCAGTAAGAAGATGTGCTCTACGCCCTGACCGTa                               <  2:551245/99‑1 (MQ=255)
                                                                       ttAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTAt                              <  2:1727630/100‑1 (MQ=255)
                                                                        tAGGGCGCGCGTGGGGCAGGAAGTTAGCcgcgccctaaaaagccctgcggtcggagatcggtcaaataccagggcaaaccatcaaaccactgttcgtcgc                             <  1:1084972‑M2/100‑73 (MQ=255)
                                                                        tAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTAtt                             <  1:686643/100‑1 (MQ=255)
                                                                        tAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTAtt                             >  2:1499652/1‑100 (MQ=255)
                                                                        tAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTAt                              <  1:2423352/99‑1 (MQ=255)
                                                                         aGGGCGTGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTAttt                            <  1:1063570/100‑1 (MQ=255)
                                                                         aGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTAttt                            <  2:873504/100‑1 (MQ=255)
                                                                         aGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTAtt                             >  1:1739757/1‑99 (MQ=255)
                                                                          gggCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTa                           >  2:548468/1‑100 (MQ=255)
                                                                            gcgcgcGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAAc                         <  2:1463421/100‑1 (MQ=255)
                                                                             cgcgcgTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATCTCCGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACg                        <  1:2439016/100‑1 (MQ=255)
                                                                              gcgcgTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAAc                         <  1:2534766/98‑1 (MQ=255)
                                                                              gcgcgTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACgg                       <  2:592904/100‑1 (MQ=255)
                                                                               cgcgTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGt                      >  2:1013491/1‑100 (MQ=255)
                                                                                gcgTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTg                     <  2:1498153/100‑1 (MQ=255)
                                                                                gcgTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTg                     <  2:1385631/100‑1 (MQ=255)
                                                                                 cgTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGa                    <  2:1058032/100‑1 (MQ=255)
                                                                                   tGGGGCAGGAAGTTAGCCGCGCAACTAAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAat                  <  1:1850868/100‑1 (MQ=255)
                                                                                    ggggCAGGAAGTTAGCCGCGCAACTGAATATGACTGATGATATACGTCTCTGGCAGTAAGAACATGTGCTCTACGCCCTGAGCGTATTTAACGGTGa                    <  1:1503691/97‑1 (MQ=255)
                                                                                      ggCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAAtata               <  2:491656/100‑1 (MQ=255)
                                                                                      ggCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAAtata               >  2:1315649/1‑100 (MQ=255)
                                                                                        cAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACt             <  1:480320/100‑1 (MQ=255)
                                                                                         aGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTg            >  1:1813144/1‑100 (MQ=255)
                                                                                          ggAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTgg           >  2:224974/1‑100 (MQ=255)
                                                                                           gAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGc          <  2:609988/100‑1 (MQ=255)
                                                                                              gTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGCAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCggt       >  1:413415/1‑100 (MQ=255)
                                                                                              gTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCggt       >  1:1141209/1‑100 (MQ=255)
                                                                                                tAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCggttg     >  1:699077/1‑100 (MQ=255)
                                                                                                 aGCCGCGCAACTGAATCTGACTTATGATATATGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCggttgg    <  1:1750801/100‑1 (MQ=255)
                                                                                                 aGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCggttgg    >  2:1797867/1‑100 (MQ=255)
                                                                                                  gCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCggttggt   >  1:167443/1‑100 (MQ=255)
                                                                                                   ccGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCggttggtt  <  1:548466/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCGCAGATGGCGACGAACAGTGGTTTGATGGTTTGCCCTGGTATTTGACCGATCTCCGACCGCAGGGCTTTTTAGGGCGCGCGTGGGGCAGGAAGTTAGCCGCGCAACTGAATCTGACTGATGATATACGTCTCTGGCAGGAAGAAGATGTGCTCTACGCCCTGACCGTATTTAACGGTGAATATACTGGCGGTTGGTT  >  NC_000913/4622043‑4622241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.