BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4638329	82 (0.890)	8 (0.090)	5/168	NT	8.8%	coding (152/1353 nt)	creD	inner membrane protein
*	?	NC_000913	= 4638348	89 (1.030)	8 (0.090)	5/168	NT	8.8%	coding (171/1353 nt)	creD	inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 115 total aligned reads displayed.

AATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAG  >  NC_000913/4638249‑4638447

aaTGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTggg                                                                                                     >  1:1116907/1‑100 (MQ=255)

aaTGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTggg                                                                                                     >  2:382412/1‑100 (MQ=255)

 aTGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGc                                                                                                    >  2:1301540‑M2/1‑99 (MQ=255)

  tGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGcc                                                                                                   >  2:697574‑M2/1‑98 (MQ=255)

    cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                                                 <  2:179718‑M2/100‑5 (MQ=255)

     tGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgct                                                                                                >  2:783376‑M2/1‑95 (MQ=255)

       aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgct                                                                                                >  2:1041778‑M2/1‑93 (MQ=255)

        ttCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCAt                                                                                             >  1:2381429/1‑100 (MQ=255)

         tCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAATTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATc                                                                                            <  1:1186012/100‑1 (MQ=255)

         tCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATc                                                                                            <  1:54135/100‑1 (MQ=255)

          cGGCAGGTGATTGTCGAACGTGCTGCTTACCGTAGCGATGTGGAAGATGCGATTCGCCAAATTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                                           <  2:1163549/100‑1 (MQ=255)

          cGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                                           >  1:166819/1‑100 (MQ=255)

           ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                                          <  1:332997/100‑1 (MQ=255)

           ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                                          <  1:982161/100‑1 (MQ=255)

            gCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCt                                                                                         <  2:1771405/100‑1 (MQ=255)

            gCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCt                                                                                         <  1:973445/100‑1 (MQ=255)

               ggTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTAtt                                                                                      <  1:289670/100‑1 (MQ=255)

                gTGATTGTCGAACGTGCTGATTATCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCGGCAAAAAGCGGTTGGGCCGCTCATCGCTATTc                                                                                     >  1:1105663/1‑100 (MQ=255)

                 tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                                    >  1:1366835/1‑100 (MQ=255)

                 tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                                    <  1:1712612/100‑1 (MQ=255)

                   aTTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtg                                                                                  <  1:2220556/100‑1 (MQ=255)

                    ttGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgt                                                                                 <  2:1271230/100‑1 (MQ=255)

                     tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                                                <  1:1611382/100‑1 (MQ=255)

                     tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                                                >  2:1449413/1‑100 (MQ=255)

                     tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                                                <  1:1351199/100‑1 (MQ=255)

                     tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                                                <  2:919523/100‑1 (MQ=255)

                      gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAACAACTCGTTGGGCCGCTCATCACTATTCCtgtg                                                                                >  1:570157/1‑99 (MQ=255)

                       tCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGan                                                                              <  2:2108679/100‑2 (MQ=255)

                           aCGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGan                                                                          <  1:2232034/100‑2 (MQ=255)

                             gTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCt                                                                        >  1:950031/1‑100 (MQ=255)

                              tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                                       >  1:68676/1‑100 (MQ=255)

                              tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                                       >  1:1140712/1‑100 (MQ=255)

                                    ttACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACg                                                                 >  1:1085373/1‑100 (MQ=255)

                                     tACCGTAGCGATGGGGAAGATGCGATTCGCCAAAGTACAAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACg                                                                 >  1:1598194/1‑99 (MQ=255)

                                      aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                                               >  2:404370/1‑100 (MQ=255)

                                       ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                                              >  1:76250/1‑100 (MQ=255)

                                        cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                                             <  2:667449/100‑1 (MQ=255)

                                         gTAGCGATGTGGAAGATGCGATTCGCTAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                                             <  1:1503444/99‑1 (MQ=255)

                                          tAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAg                                                           <  2:387258/100‑1 (MQ=255)

                                           agggATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAgg                                                          <  1:2376782/97‑1 (MQ=255)

                                           aGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAgg                                                          <  2:465881/100‑1 (MQ=255)

                                            ncGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                                         >  1:2524152/2‑100 (MQ=255)

                                            gCGTTGTGGAAGATGGGATTCGCCTAAGTAGCGGCAGGCCGCAATAACTCGTTTGGCCGCTCAGCGCTATTGGTGTGACCGAGCTTTATACGGTGGAg                                                           <  1:718077/98‑1 (MQ=255)

                                            gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                                         <  2:683446/100‑1 (MQ=255)

                                            gCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                                         >  2:586349/1‑100 (MQ=255)

                                                tgtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAagag                                                     >  1:1312025/1‑100 (MQ=255)

                                                 gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATAGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                    >  2:975686/1‑100 (MQ=255)

                                                  tgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGa                                                   <  2:1043019/100‑1 (MQ=255)

                                                   ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAGACTCGGTGGGCCGCTCAGCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                    >  2:1972660/1‑98 (MQ=255)

                                                   ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                                                  >  1:726279/1‑100 (MQ=255)

                                                    gAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATa                                                 <  2:1369807/100‑1 (MQ=255)

                                                      aGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaaa                                               >  2:1931613/1‑100 (MQ=255)

                                                       gATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaaaa                                              >  1:1729298/1‑100 (MQ=255)

                                                       gATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaaaa                                              >  1:73008/1‑100 (MQ=255)

                                                        aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                                             >  2:132231/1‑100 (MQ=255)

                                                        aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                                             >  2:2310104/1‑100 (MQ=255)

                                                           cGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                                             <  2:1085377/97‑1 (MQ=255)

                                                            gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                         >  1:2376740/1‑100 (MQ=255)

                                                            gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                         <  2:2251104/100‑1 (MQ=255)

                                                                cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     >  1:1058851/1‑100 (MQ=255)

                                                                cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     >  2:582605/1‑100 (MQ=255)

                                                                cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     >  2:307745/1‑100 (MQ=255)

                                                                    aaaGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGaa                                 <  2:1852527/100‑1 (MQ=255)

                                                                      aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc                               <  1:609760/100‑1 (MQ=255)

                                                                       gtcccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACg                              <  1:280252/97‑1 (MQ=255)

                                                                       gTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACg                              <  2:2174512/100‑1 (MQ=255)

                                                                         aCCAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaa                            <  2:2021997‑M2/100‑74 (MQ=255)

                                                                         aCCAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccga                             <  1:1246513‑M2/99‑73 (MQ=255)

                                                                         aCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGaa                            >  2:1762610/1‑100 (MQ=255)

                                                                          cccgCGGGCCGCAAAAACCCGTTGGGCGGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGGGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGa                             <  2:1674930/95‑1 (MQ=255)

                                                                          ccAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaat                           <  1:1667830‑M2/100‑75 (MQ=255)

                                                                           cAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGt                          >  2:2024584/1‑100 (MQ=255)

                                                                           cAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGt                          <  2:1652905/100‑1 (MQ=255)

                                                                            aGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatca                         <  1:1290112‑M2/100‑77 (MQ=255)

                                                                            aGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatca                         <  2:651539‑M2/100‑77 (MQ=255)

                                                                             gCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatcag                        <  1:1234769‑M2/100‑78 (MQ=255)

                                                                             gCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt                        <  2:899107/100‑1 (MQ=255)

                                                                             gCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt                        >  1:15663/1‑100 (MQ=255)

                                                                               gggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTa                      <  1:870743/100‑1 (MQ=255)

                                                                                 gCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGGGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATc                    <  1:2071467/100‑1 (MQ=255)

                                                                                 gCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATc                    >  2:1617360/1‑100 (MQ=255)

                                                                                 gCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATc                    >  2:1374928/1‑100 (MQ=255)

                                                                                   cGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGGTAAAACCGTGGAGCGGAAACGAAGTTTTATc                    <  1:1630806/98‑1 (MQ=255)

                                                                                    gCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAt                 >  1:686320/1‑100 (MQ=255)

                                                                                    gCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAt                 >  1:1175875/1‑100 (MQ=255)

                                                                                    gCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAt                 >  2:2352384/1‑100 (MQ=255)

                                                                                      aaaaaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAttt               >  1:1740219/1‑100 (MQ=255)

                                                                                       aaaaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCAtttt              <  1:1617351/100‑1 (MQ=255)

                                                                                          aCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  1:1448470/100‑1 (MQ=255)

                                                                                          aCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  2:1220931/100‑1 (MQ=255)

                                                                                          aCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  2:538281/100‑1 (MQ=255)

                                                                                           cTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGt          <  1:1762601/100‑1 (MQ=255)

                                                                                           cTCGTGGTGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  2:871983/99‑1 (MQ=255)

                                                                                             cGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGGTAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTa        >  2:1542272/1‑100 (MQ=255)

                                                                                             cGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTa        >  2:761710/1‑100 (MQ=255)

                                                                                             cGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTa        <  1:1374920/100‑1 (MQ=255)

                                                                                                 gggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg    >  1:1836443/1‑100 (MQ=255)

                                                                                                 gggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg    <  2:1061547/100‑1 (MQ=255)

                                                                                                  ggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGa   >  2:2525290/1‑100 (MQ=255)

                                                                                                   gCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAg  >  2:1503919/1‑100 (MQ=255)

AATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAG  >  NC_000913/4638249‑4638447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.