| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1187036 = | NA (NA) | 3 (0.040) | 3/168 | NT | NA | coding (1193/1227 nt) | pepT | peptidase T |
| ? | NC_000913 | 1187066 = | NA (NA) | coding (1223/1227 nt) | pepT | peptidase T | |||||
TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1187139‑1187036‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAG > NC_000913/1187066‑1187163 TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATA < 1:106793/100‑1 TGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGG > 1:1094594/1‑100 TGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGG < 2:1262518/100‑1 GGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA > 1:970358/1‑100 CTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTATTTCTGTTGCGCCGTTAACTCGGCAATACG > 2:32693/1‑94 GCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTACGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCG > 2:1971328/1‑100 TACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAG > 2:187906/1‑100 CCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCCTCGAAGAACC > 2:2021288/1‑99 GAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAG < 1:554653/100‑1 GAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAG < 2:2133418/100‑1 GAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAG < 2:274262/100‑1 TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1187139‑1187036‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAG > NC_000913/1187066‑1187163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |