New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1187036 =NA (NA)3 (0.040) 3/168 NT NA coding (1193/1227 nt) pepT peptidase T
?NC_000913 1187066 = NA (NA)coding (1223/1227 nt) pepT peptidase T

Only 100 of 104 total aligned reads displayed.

TTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCA  >  NC_000913/1186968‑1187165
                                                                                                  |                                                                                                   
ttACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAg                                                                                                    <  1:607657/100‑1 (MQ=255)
  cttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTa                                                                                                  >  2:187906‑M1/67‑100 (MQ=255)
   cAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGCGTTAACGGCGCAACGGAAGTa                                                                                                  >  1:193984/1‑99 (MQ=255)
    aaCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAg                                                                                                >  2:1411085/1‑100 (MQ=255)
    aaCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAACGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAg                                                                                                <  1:971160/100‑1 (MQ=255)
     cgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcgtactTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                                               >  2:1971328‑M1/64‑100 (MQ=255)
     aCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                                               >  1:2133834/1‑100 (MQ=255)
     aCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                                               >  2:2225484/1‑100 (MQ=255)
      cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                                              <  2:1462057/100‑1 (MQ=255)
      cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                                              >  2:1495649/1‑100 (MQ=255)
       tATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTCTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                                              >  2:253456/1‑99 (MQ=255)
       tATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGa                                                                                             <  1:1077114/100‑1 (MQ=255)
          cATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaaaa                                                                                          >  1:1498849/1‑100 (MQ=255)
           aTGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAg                                                                                         >  1:1783936/1‑100 (MQ=255)
           aTGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAg                                                                                         >  2:191163/1‑100 (MQ=255)
           aTGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAg                                                                                         >  1:1130016/1‑100 (MQ=255)
            tGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAgg                                                                                        >  2:2089121/1‑100 (MQ=255)
            tGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAgg                                                                                        >  2:319340/1‑100 (MQ=255)
             ggTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAggg                                                                                       <  1:1634697/100‑1 (MQ=255)
                 aGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGc                                                                                   >  1:274263/1‑100 (MQ=255)
                  gCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCg                                                                                  >  1:1646453/1‑100 (MQ=255)
                  gCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCg                                                                                  >  2:1364170/1‑100 (MQ=255)
                   cATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCgg                                                                                 >  2:46708/1‑100 (MQ=255)
                     tGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCa                                                                               >  1:1951421/1‑100 (MQ=255)
                       aGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtg                                                                             <  1:2080424/100‑1 (MQ=255)
                       aGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtg                                                                             >  1:2133436/1‑100 (MQ=255)
                        gTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgt                                                                            <  1:2157050/100‑1 (MQ=255)
                         tttGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgtg                                                                           <  2:328511/100‑1 (MQ=255)
                         tttGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtcac                                                                           <  2:1614654/100‑4 (MQ=255)
                           tgtgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGAt                                                                         >  1:279037/1‑100 (MQ=255)
                           tgtgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGAt                                                                         >  1:2350153/1‑100 (MQ=255)
                             tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc                                                                       >  1:2121057/1‑100 (MQ=255)
                             tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc                                                                       >  1:2302936/1‑100 (MQ=255)
                                 tctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCa                                                                   >  2:1071253/1‑100 (MQ=255)
                                  ctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCAt                                                                  >  2:826608/1‑100 (MQ=255)
                                  ctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCAt                                                                  >  2:1634022/1‑100 (MQ=255)
                                   tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAGAAGGGATGCGGCATGTGATGCCGCATc                                                                 >  1:900011/1‑100 (MQ=255)
                                   tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATc                                                                 >  2:1303233/1‑100 (MQ=255)
                                   tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATc                                                                 <  1:416087/100‑1 (MQ=255)
                                   tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                                                 <  1:1280526/100‑1 (MQ=255)
                                    ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc                                                                >  1:644663/1‑100 (MQ=255)
                                         gTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCtt                                                           >  2:1839969/1‑100 (MQ=255)
                                          tATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa                                                          >  2:1305857/1‑100 (MQ=255)
                                          naTGGAAAAAGCGGTGCAGGCGATGGTCCGTATTGCCGAGTTAACAGCGCAACGGAAGTACGCGAAATCGTATACTGCATGTGATGCAGCATcctg                                                              >  2:2092810/2‑94 (MQ=255)
                                           aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa                                                         <  2:1313755/100‑1 (MQ=255)
                                           aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa                                                         <  1:632108/100‑1 (MQ=255)
                                             ggAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAAt                                                       >  2:201605/1‑100 (MQ=255)
                                              gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATc                                                      >  1:1613354/1‑100 (MQ=255)
                                              gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATc                                                      <  1:1129948/100‑1 (MQ=255)
                                              gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATACGGCTTAAATc                                                      >  2:470331/1‑100 (MQ=255)
                                               aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATcc                                                     >  1:2284363/1‑100 (MQ=255)
                                               aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATcc                                                     >  1:2295358/1‑100 (MQ=255)
                                                  aaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCaaa                                                  <  1:678531/100‑1 (MQ=255)
                                                   aGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAAc                                                 >  1:408217/1‑100 (MQ=255)
                                                     cGGTGCAGCTGATCGTCCGTATTGCCGAGTTAACGGCGCCCAGGCAGTAAGCGAAAAGGGATGCGGCATGTGATGACGCATCCGGCTTAAACCCAAAc                                                 <  2:193983/98‑1 (MQ=255)
                                                        tGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAcc                                            <  1:1389218/100‑1 (MQ=255)
                                                         gCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTACGCGAAACGGGATGCGGCATGTGATGCAGCATCCGGCTTAAATCCAACCTTAc                                             >  2:2172275/1‑98 (MQ=255)
                                                         gCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAccc                                           >  2:1084905/1‑100 (MQ=255)
                                                         gCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAccc                                           >  1:357959/1‑100 (MQ=255)
                                                          cAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCt                                          >  2:452351/1‑100 (MQ=255)
                                                           aGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCtt                                         <  2:279036/100‑1 (MQ=255)
                                                            ggTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTc                                        <  1:572473/100‑1 (MQ=255)
                                                            ggTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTc                                        >  1:1947492/1‑100 (MQ=255)
                                                             gcttacttccgttgcgccgttaactcggcaatacggaAGTACGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCg                                       >  2:1971328‑M2/38‑100 (MQ=255)
                                                             gTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCg                                       <  1:3340/100‑1 (MQ=255)
                                                             gTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCg                                       <  2:1816059/100‑1 (MQ=255)
                                                              tGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga                                      <  1:1809278/100‑1 (MQ=255)
                                                              tGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga                                      <  1:922449/100‑1 (MQ=255)
                                                              tGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga                                      >  1:2305354/1‑100 (MQ=255)
                                                                 tCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaaga                                   <  2:1592056/100‑1 (MQ=255)
                                                                  cGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaagaa                                  >  1:1093414/1‑100 (MQ=255)
                                                                  cGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaaga                                   >  2:1538459/1‑99 (MQ=255)
                                                                   gTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAc                                 <  1:1347393/100‑1 (MQ=255)
                                                                    TCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc                                >  1:970358‑M1/1‑100 (MQ=255)
                                                                     ccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCCTCGAAGAAcc                                >  2:2021288‑M2/30‑99 (MQ=255)
                                                                     CCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCa                               >  1:1094594‑M1/1‑100 (MQ=255)
                                                                     CCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCa                               <  2:1262518‑M1/100‑1 (MQ=255)
                                                                      CGTATTGCCGAGTTAACGGCGCAACAGAAATAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaag                                    >  2:32693‑M1/1‑94 (MQ=255)
                                                                        TATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATa                            <  1:106793‑M1/100‑1 (MQ=255)
                                                                          ttGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATAcc                          <  2:1069039/100‑1 (MQ=255)
                                                                            gCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCg                        >  1:1951503/1‑100 (MQ=255)
                                                                            gCCGAGTCAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTCAATCCAAACTTACCCTTCGAAGAACCAATACCCg                        >  2:1235970/1‑100 (MQ=255)
                                                                                   tAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGa                 >  1:1328372/1‑100 (MQ=255)
                                                                                   tAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGa                 <  2:1608600/100‑1 (MQ=255)
                                                                                   tAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGa                 <  2:460704/100‑1 (MQ=255)
                                                                                    aaCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAc                >  2:1190826/1‑100 (MQ=255)
                                                                                    aaCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAc                >  2:580648/1‑100 (MQ=255)
                                                                                    aaCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAc                >  2:611111/1‑100 (MQ=255)
                                                                                     aCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc               <  1:452354/100‑1 (MQ=255)
                                                                                     aCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc               <  1:1303239/100‑1 (MQ=255)
                                                                                     aCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc               <  1:74569/100‑1 (MQ=255)
                                                                                     aCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc               <  1:2165335/100‑1 (MQ=255)
                                                                                     aCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGAcc               <  1:1495657/100‑1 (MQ=255)
                                                                                      cGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCa              >  1:1692606/1‑100 (MQ=255)
                                                                                       ggCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAg             >  1:1452628/1‑100 (MQ=255)
                                                                                           cAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGcgcc         >  2:47262/1‑100 (MQ=255)
                                                                                                gaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAg    <  2:274262‑M2/98‑1 (MQ=255)
                                                                                                gaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAg    <  1:554653‑M2/98‑1 (MQ=255)
                                                                                                gaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAg    <  2:2133418‑M2/98‑1 (MQ=255)
                                                                                                  aGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCa  <  1:2017973/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
TTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGCA  >  NC_000913/1186968‑1187165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.