New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2232736 =	NA (NA)	3 (0.040)	3/166	NT	NA	noncoding (1/34 nt)	REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences
	?	NC_000913	2232766 =	NA (NA)					noncoding (31/34 nt)	REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP155 (repetitive extragenic palindromic) element; contains 1 REP sequences

ACTTTACCCGCTGGTTTTGCGCAAGAAACGGCAAACTGTTTGCCGGGAATTTCGACACCAGGAGAGGGCTGGCAAGCCGGACAAGGCGTTCACGCCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2232840‑2232736 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTTAG  >  NC_000913/2232766‑2232863                                                                                                                                                                                                             ACTTTACCCGCTGGTTTTGCGCAAGAAACGGCAAACTGTTTGCCGGGAATTTCGACACCAGGAGAGGGCTGGCAAGCCGGACAAGGCGTTCACGCCGCAT                                                                                                         <  2:1944750/100‑1     TACCCGCTGGTTTTGCGCAAGAAACGGCAAACTGTTTGCCGGGAATTTCGACACCAGGAGAGGGCTGGCAAGCCGGACAAGGCGTTCACGCCGCATCCGG                                                                                                     >  2:536626/1‑100     TACCCGCTGGTTTTGCGCAAGAAACGGCAAACTGTTTGCCGGGAATTTCGACACCAGGAGAGGGCTGGCAAGCCGGACAAGGCGTTCACGCCGCATCCGG                                                                                                     <  1:536629/100‑1                                                    TCGACACCAGGAGAGGGCTGGCAAGCCGGACAAGGCGTTCACGCCGCATCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCC                                                      >  1:2056882/1‑100                                                                          AAGCCGGACAAGGCGTTCACGCCGCATCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGG                                >  2:428911/1‑100                                                                           AGCCGGACAAGGCGTTCACGCCGCATCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGG                                >  2:957115/1‑99                                                                                                    TCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCTAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCC      <  1:1654103/100‑1                                                                                                    TCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCC      <  1:1025122/100‑1                                                                                                    TCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCC      <  1:2117717/100‑1                                                                                                    TCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCC      >  2:1027304/1‑100                                                                                                    TCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCC      <  2:103759/100‑1                                                                                                    TCCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCC      <  2:1910555/100‑1                                                                                                     CCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCT     >  2:157728/1‑100                                                                                                     CCGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCC      <  1:1518729/99‑1                                                                                                      CGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTT    >  1:1044345/1‑100                                                                                                      CGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTT    <  2:719315/100‑1                                                                                                      CGGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTT    <  1:364506/100‑1                                                                                                      CGGCTTGCCAGCCCTCTCCTGGTGTCCAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTT    >  1:1430592/1‑100                                                                                                       GGCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTTA   >  1:501766/1‑100                                                                                                        GCTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTTAG  >  1:815235/1‑100                                                                                                         CTTGCCAGCCCTCTCCTGGTGTCGAAAGTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTTA   <  2:475373/98‑1                                                                                                                                                                                                             ACTTTACCCGCTGGTTTTGCGCAAGAAACGGCAAACTGTTTGCCGGGAATTTCGACACCAGGAGAGGGCTGGCAAGCCGGACAAGGCGTTCACGCCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2232840‑2232736 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccggcTTGCCAGCCCTCTCCTGGTGTCGAAATTCCCGGCAAACAGTTTGCCGTTTCTTGCGCAAAACCAGCGGGTAAAGTAGCCTGATGGAAATTTTCCTTAG  >  NC_000913/2232766‑2232863

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.