New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4249477NA (NA)6 (0.070) 5/166 NT NA intergenic (+166/‑77) lamB/malM maltose outer membrane porin (maltoporin)/maltose regulon periplasmic protein
?NC_000913 = 4249481 NA (NA)intergenic (+170/‑73) lamB/malM maltose outer membrane porin (maltoporin)/maltose regulon periplasmic protein

Only 100 of 161 total aligned reads displayed.

GCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAATAAAAGTCTCAT  >  NC_000913/4249378‑4249576
                                                                                                   |                                                                                                   
gcgcGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGC                                                                                                     <  1:1124305‑M1/100‑1 (MQ=255)
gcgcGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGC                                                                                                     >  1:953081‑M1/1‑100 (MQ=255)
gcgcGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGC                                                                                                     <  1:2236583‑M1/100‑1 (MQ=255)
  gcgTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGa                                                                                                   <  2:879889/100‑1 (MQ=255)
   cgTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGaa                                                                                                  <  2:2163916/100‑1 (MQ=255)
        tATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAgccc                                                                                             <  1:483973‑M2/100‑5 (MQ=255)
         aTCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAgcccc                                                                                            >  2:1819519‑M2/1‑95 (MQ=255)
         aTCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAgcccc                                                                                            <  1:663582‑M2/100‑6 (MQ=255)
             ggCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCtttcgcccctttc                                                                                        <  1:1971088‑M1/100‑14 (MQ=255)
             ggCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTg                                                                                        <  1:9053/100‑1 (MQ=255)
              gCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCtttcgcccctttca                                                                                       <  2:1320886‑M1/100‑15 (MQ=255)
              gCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCtttcgcccctttca                                                                                       <  1:13954‑M1/100‑15 (MQ=255)
               ccTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGAt                                                                                      <  2:194896/100‑1 (MQ=255)
                 tACAACGGCTGTCAAATGTAGGCCTGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTa                                                                                    <  1:244445/100‑1 (MQ=255)
                   cAACGGCTGACAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTAGTCATTACATAACAGGGACGAAAGCCACTATGAtt                                                                                     >  2:222799/1‑97 (MQ=21)
                    aaCGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGTTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCg                                                                                 <  1:651105/100‑1 (MQ=255)
                     aCGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCTTTCgcccctttcagataatg                                                                                >  2:1353409‑M2/1‑83 (MQ=255)
                     aCGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCGCTCTGATTATctg                                                                                <  1:1587517/100‑3 (MQ=255)
                     aCGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCgg                                                                                <  2:2145473/100‑1 (MQ=255)
                      cGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCTTTCgcccctttcagataatga                                                                               >  1:956481‑M2/1‑82 (MQ=255)
                      cGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCggg                                                                               >  1:1778633/1‑100 (MQ=255)
                       ggCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCggg                                                                               <  2:2260104/99‑1 (MQ=255)
                       ggCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGt                                                                              >  1:174115/1‑100 (MQ=255)
                        gCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGtt                                                                             >  1:1303751/1‑100 (MQ=255)
                           gTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAg                                                                          >  1:1536536/1‑100 (MQ=255)
                            tCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgc                                                                         >  2:785889/1‑100 (MQ=255)
                             cAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcg                                                                        >  1:1209081/1‑100 (MQ=255)
                             cAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcg                                                                        >  2:2229226/1‑100 (MQ=255)
                             cAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcg                                                                        >  1:332177/1‑100 (MQ=255)
                             cAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcg                                                                        >  2:257562/1‑100 (MQ=255)
                              aaaTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcgc                                                                       <  2:1324368/100‑1 (MQ=255)
                               aaTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcgcg                                                                      >  2:334148/1‑100 (MQ=255)
                               aaTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcgcg                                                                      <  2:100905/100‑1 (MQ=255)
                               aaTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcgcg                                                                      <  1:795073/100‑1 (MQ=255)
                                aTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcgcgc                                                                     >  1:1157361/1‑100 (MQ=255)
                                aTGGAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAgcgcgc                                                                     <  2:1697094/100‑1 (MQ=255)
                                   tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTAt                                                                  <  1:1525416/100‑1 (MQ=255)
                                    aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTAtt                                                                 >  1:1900423/1‑100 (MQ=255)
                                    aGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTAtt                                                                 >  2:270090/1‑100 (MQ=255)
                                     ggCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTg                                                                <  2:2024468/100‑1 (MQ=255)
                                     ggCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTg                                                                >  1:2342330/1‑100 (MQ=255)
                                     ggCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTg                                                                <  1:2059194/100‑1 (MQ=255)
                                       ccGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGcc                                                              <  1:5220/100‑1 (MQ=255)
                                       ccGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGcc                                                              >  1:730238/1‑100 (MQ=255)
                                         ggATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTg                                                            <  2:861408/100‑1 (MQ=255)
                                         ggATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTg                                                            <  2:623972/100‑1 (MQ=255)
                                          gATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTgg                                                           <  1:1571354/100‑1 (MQ=255)
                                            tAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCt                                                         >  2:528817/1‑100 (MQ=255)
                                                   tttACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTg                                                  <  2:806976/100‑1 (MQ=255)
                                                   tttACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTg                                                  <  2:1177746/100‑1 (MQ=255)
                                                    ttACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGa                                                 >  2:1634049/1‑100 (MQ=255)
                                                    ttACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGa                                                 >  1:471679/1‑100 (MQ=255)
                                                    ttACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGa                                                 <  1:689199/100‑1 (MQ=255)
                                                    ttACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGa                                                 >  1:40980/1‑100 (MQ=255)
                                                     tACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAg                                                <  2:1496907/100‑1 (MQ=255)
                                                       cgccgcATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCt                                              >  1:325473/1‑100 (MQ=255)
                                                       cgccgcATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCt                                              >  1:1312631/1‑100 (MQ=255)
                                                        gccgcATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCgaaagcccctttcagataatgacaacctgtttttatgccggatgcggcgtaaacgc                                             >  1:482595‑M1/1‑44 (MQ=255)
                                                         ccgcATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTcc                                            >  2:1922286/1‑100 (MQ=255)
                                                          cgcATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCa                                           >  1:2168335/1‑100 (MQ=255)
                                                              tCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGAtt                                       >  2:421834/1‑100 (MQ=255)
                                                               ccGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGAttt                                      >  1:1849452/1‑100 (MQ=255)
                                                                cGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGAtttt                                     <  1:1798153/100‑1 (MQ=255)
                                                                 ggCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGagatcg                                    >  2:1811210/1‑95 (MQ=255)
                                                                 ggCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTg                                    >  2:248166/1‑100 (MQ=255)
                                                                 ggCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTg                                    <  2:2041062/100‑1 (MQ=255)
                                                                 ggCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTg                                    <  2:1494855/100‑1 (MQ=255)
                                                                   cATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAg                                  <  1:1057646/100‑1 (MQ=255)
                                                                   cATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAg                                  <  1:1812281/100‑1 (MQ=255)
                                                                   cATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAg                                  <  1:101812/100‑1 (MQ=255)
                                                                   cATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAg                                  <  2:1296556/100‑1 (MQ=255)
                                                                        aaaCAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGaa                             <  1:4417/100‑1 (MQ=255)
                                                                        aaaCAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGaa                             >  1:469489/1‑100 (MQ=255)
                                                                           cAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGCGAAAAc                          >  1:1375513/1‑100 (MQ=255)
                                                                             ggTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACaa                        >  1:444755/1‑100 (MQ=255)
                                                                             ggTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACaa                        >  1:1357399/1‑100 (MQ=255)
                                                                                 gttaTTATCTGAAGGGCGCGAAAGCCCCTCTGATTATCGGGTTAAGCGCGCTATTGACTGCCTACCGATGAGCACCAGATTTGGAGGTGAACACaatg                      <  2:1610419/95‑1 (MQ=255)
                                                                                 gTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACaatgaa                    <  2:2271232/100‑1 (MQ=255)
                                                                                  tCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACaatgaaa                   <  2:1316410/100‑1 (MQ=255)
                                                                                   cATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACaatgaaaa                  >  1:121774/1‑100 (MQ=255)
                                                                                    aTTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACaatgaaaat                 >  2:1229418/1‑100 (MQ=255)
                                                                                    aTTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACaatgaaaat                 <  1:853183/100‑1 (MQ=255)
                                                                                       aTCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACaatgaaaatgaa              <  1:590230/100‑1 (MQ=255)
                                                                                        tCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAAt             <  1:259142/100‑1 (MQ=255)
                                                                                         cTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAATa            >  2:648152/1‑100 (MQ=255)
                                                                                         cTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAATa            >  1:123948/1‑100 (MQ=255)
                                                                                          tGAAAGGGGCGAAAgcccctttcagataatgacaacctgtttttatgccggatgcggcgtaaacgccttatccggcctacatttgacagccgttgtaggc           <  1:13954‑M2/100‑87 (MQ=255)
                                                                                           gAAAGGGGCGAAAgcccctttcagataatgacaacctgtttttatgccggatgcggcgtaaacgccttatccggcctacatttgacagccgttgtaggcc          <  1:1971088‑M2/100‑88 (MQ=255)
                                                                                           gAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGGGGTGAAAACAATGAAAATGAATaaa          >  1:2013368/1‑100 (MQ=255)
                                                                                               ggggCtttcgcccctttcagataatgacaacctgtttttatgccggatgcggcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgat      >  2:1819519‑M1/1‑5 (MQ=255)
                                                                                               ggggCtttcgcccctttcagataatgacaacctgtttttatgccggatgcggcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgat      >  2:2325893‑M1/1‑5 (MQ=255)
                                                                                               ggggCtttcgcccctttcagataatgacaacctgtttttatgccggatgcggcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgat      <  1:849947‑M1/100‑96 (MQ=255)
                                                                                                gggCtttcgcccctttcagataatgacaacctgtttttatgccggatgcggcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgata     <  1:483973‑M1/100‑97 (MQ=255)
                                                                                                gggCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAATAAAAGtct     >  1:2114968/1‑100 (MQ=255)
                                                                                                 ggCtttcgcccctttcagataatgacaacctgtttttatgccggatgcggcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataa    <  1:1384161‑M1/100‑98 (MQ=255)
                                                                                                 ggCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAATAAAAGtctc    <  2:1362668/100‑1 (MQ=255)
                                                                                                 ggCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAATAAAAGtctc    >  2:1703107/1‑100 (MQ=255)
                                                                                                 ggCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAATAAAAGtctc    >  2:1552693/1‑100 (MQ=255)
                                                                                                  gCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAATAAAAGTCTCa   <  1:1439023/100‑1 (MQ=255)
                                                                                                   ctttcgcccctttcagataatgacaacctgtttttatgccggatgcggcgtaaacgccttatccggcctacatttgacagccgttgtaggcctgataaga  <  2:720886‑M1/100‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCGCGTCTTATCAGGCCTACAACGGCTGTCAAATGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAAACAGGTTGTCATTATCTGAAAGGGGCGAAAGCCCCTCTGATTATCGGGTTTAGCGCGCTATTGCCTGGCTACCGCTGAGCTCCAGATTTTGAGGTGAAAACAATGAAAATGAATAAAAGTCTCAT  >  NC_000913/4249378‑4249576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.