New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4627662 =89 (1.020)4 (0.050) 3/170 NT 4.7% coding (348/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 4627688 = 78 (0.940)coding (374/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 107 total aligned reads displayed.

TATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCC  >  NC_000913/4627563‑4627760
                                                                                                   |                                                                                                  
tccacacatcccagccgtgcggatacggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacg                                                                                                    <  1:720680‑M1/1‑1 (MQ=255)
tccacacatcccagccgtgcggatacggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacg                                                                                                    <  1:498482‑M1/1‑1 (MQ=255)
 ccacacatcccagccgtgcggatacggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGc                                                                                                   <  2:1122246‑M1/2‑1 (MQ=255)
 aTCCAGCGCCCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCgcagc                                                                                                   <  1:2348235/100‑1 (MQ=255)
  tCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCgcagca                                                                                                  >  1:1820217/1‑100 (MQ=255)
  cacacatcccagccgtgcggatacggctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCa                                                                                                  >  1:1132964‑M1/98‑100 (MQ=255)
   ccAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGcagcag                                                                                                 >  1:1947632/1‑100 (MQ=255)
    cAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCagcagc                                                                                                >  1:740423/1‑100 (MQ=255)
    cAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCagcagc                                                                                                <  1:168167/100‑1 (MQ=255)
     aGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGcc                                                                                               >  2:1383566/1‑100 (MQ=255)
      gcgcgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGccn                                                                                              <  1:1502148/100‑2 (MQ=255)
       cgcgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGa                                                                                             >  2:1106212/1‑100 (MQ=255)
        gcgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGAc                                                                                            <  2:1549455/100‑1 (MQ=255)
         cgcCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGAcc                                                                                           >  2:1622106/1‑100 (MQ=255)
           ccTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGt                                                                                         >  1:1819189/1‑100 (MQ=255)
           ccTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGt                                                                                         >  1:1219735/1‑100 (MQ=255)
           ccTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGt                                                                                         >  1:416803/1‑100 (MQ=255)
              gTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGcc                                                                                      >  2:1407342/1‑100 (MQ=255)
               tAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCg                                                                                     <  2:1027244/100‑1 (MQ=255)
               tAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCg                                                                                     <  1:1833994/100‑1 (MQ=255)
                 gCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGGCAGTGCCATGTCGCAGCAGCCGACCGTGCCGGa                                                                                   >  2:1599579/1‑100 (MQ=255)
                    aGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCg                                                                                >  2:590026/1‑100 (MQ=255)
                     ggTTGCCGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGGCGCAGCAGCCGACCGTGCCGGATCGt                                                                               >  2:591911/1‑100 (MQ=255)
                       ttGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCt                                                                             >  2:984815/1‑100 (MQ=255)
                        tGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTg                                                                            >  2:46148/1‑100 (MQ=255)
                        tGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTg                                                                            <  2:2209695/100‑1 (MQ=255)
                        tGACGAGCCGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTg                                                                            <  2:427484/100‑1 (MQ=255)
                          aCGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCg                                                                          >  2:1938805/1‑100 (MQ=255)
                             aGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                       >  2:1420914/1‑100 (MQ=255)
                              tcTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                      <  2:553100/99‑1 (MQ=255)
                              gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                      <  1:702801/100‑1 (MQ=255)
                              ccgatctatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                      <  2:575835/94‑1 (MQ=255)
                              ccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                      >  1:1998447‑M1/70‑100 (MQ=255)
                                tctccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                       >  2:1864962‑M1/68‑97 (MQ=255)
                                tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                                                    >  1:1452985/1‑100 (MQ=255)
                                 gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTggaga                                                                   >  1:553103/1‑97 (MQ=255)
                                 gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                                                   >  1:403251/1‑100 (MQ=255)
                                   ccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCtgcgttgagatcg                                                                 <  1:1864975‑M1/36‑7 (MQ=255)
                                    tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                <  2:1969795/100‑1 (MQ=255)
                                    tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                >  2:1942399/1‑100 (MQ=255)
                                    tatCATTATGGGTTTTGACGATACCCGCGCCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCCGCCGACCGTGCCGGATCGTCTGCGTTGGTTAtt                                                                 <  2:2057440/99‑1 (MQ=255)
                                    cctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                >  1:1815291‑M1/64‑100 (MQ=255)
                                     atCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTggagatcgg                                                               >  1:575838/1‑93 (MQ=255)
                                     atCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGc                                                               >  2:2242044/1‑100 (MQ=255)
                                        aTTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaaa                                                            >  1:65798/1‑100 (MQ=255)
                                          tATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACt                                                          <  1:1334036/100‑1 (MQ=255)
                                           aTGTGTTTTGACGATACCGGTGACCGGGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGGGTTGGTTATTGCACACtt                                                         >  2:466607/1‑100 (MQ=255)
                                           aTGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtt                                                         >  2:1805764/1‑100 (MQ=255)
                                            tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                        <  2:1037347/100‑1 (MQ=255)
                                            tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                        >  1:1895200/1‑100 (MQ=255)
                                            tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                        <  2:1518627/100‑1 (MQ=255)
                                            tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                        >  1:634690/1‑100 (MQ=255)
                                            tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                        <  2:240720/100‑1 (MQ=255)
                                             gggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtttt                                                       >  2:1155055/1‑100 (MQ=255)
                                             gggTTTTGACGATAACCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGACGACCGTGCCGGATAGTCTGCGTTGGTTATTGCAAACtttt                                                       <  2:2074896/100‑1 (MQ=255)
                                              ggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                      >  1:2095400/1‑100 (MQ=255)
                                               gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                     <  1:6326/100‑1 (MQ=255)
                                               gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                     <  1:2107600/100‑1 (MQ=255)
                                                  ttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAata                                                  <  2:740420/100‑1 (MQ=255)
                                                    gACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                >  1:20882/1‑100 (MQ=255)
                                                     aCGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCa                                               >  1:1346536/1‑100 (MQ=255)
                                                      cGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAata                                                  >  2:2050461/1‑96 (MQ=255)
                                                       gATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTAGCAGCAGCCGCCCGTGCCGGATCGTCTGCGTTGGGTATTGCAAACTTTTAAATATCAGa                                             >  2:1485566/1‑100 (MQ=255)
                                                           cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                         >  2:1135694/1‑100 (MQ=255)
                                                           cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGCCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                         >  2:1135217/1‑100 (MQ=255)
                                                             cGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAata                                       >  2:2129935/1‑100 (MQ=255)
                                                             cGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAata                                       >  1:721782/1‑100 (MQ=255)
                                                              gTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAatat                                      <  1:428655/100‑1 (MQ=255)
                                                                   cgcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCa                                 >  2:562611/1‑100 (MQ=255)
                                                                    gcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCAt                                <  2:585921/100‑1 (MQ=255)
                                                                      gcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTc                              >  2:929379/1‑100 (MQ=255)
                                                                       cgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCa                             >  1:1285390/1‑100 (MQ=255)
                                                                         tggttCGAATACTGTGCTATGTCGCAGCATTCGACCGTGCCGTATCGTCTGCGTTTTTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATg                           <  2:1613783/98‑1 (MQ=255)
                                                                          tgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGc                          <  2:1218113/100‑1 (MQ=255)
                                                                          tgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGc                          >  2:2117085/1‑100 (MQ=255)
                                                                           gttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCt                         >  2:2000341/1‑100 (MQ=255)
                                                                            ttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCtt                        >  1:996654/1‑100 (MQ=255)
                                                                             tCGAAGACAGTGCCATGTCGCAGCAGCCGATCGTGCCGGATCGTCTGAGTTGGTTATTGCAAAATATTAAAAATCAGAAAAATAATCGCATTAATGCtt                        >  1:143063/1‑99 (MQ=255)
                                                                             tCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCttt                       <  1:1155060/100‑1 (MQ=255)
                                                                             tCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTAATGCttt                       >  1:781686/1‑100 (MQ=255)
                                                                              cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTc                      <  1:1383574/100‑1 (MQ=255)
                                                                                aaGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCa                     <  2:916384/99‑1 (MQ=255)
                                                                                 aGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                   <  2:1120519/100‑1 (MQ=255)
                                                                                 aGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                   <  2:1394140/100‑1 (MQ=255)
                                                                                   aCAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGa                 >  1:418881/1‑100 (MQ=255)
                                                                                   aCAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGa                 <  1:1312054/100‑1 (MQ=255)
                                                                                    cAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGaa                >  2:355130/1‑100 (MQ=255)
                                                                                    cAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGaa                >  2:1339198/1‑100 (MQ=255)
                                                                                      gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga              >  1:1760481/1‑100 (MQ=255)
                                                                                      gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga              >  1:1413901/1‑100 (MQ=255)
                                                                                        gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATACTCGCATTCATGCTTTCAACGAAGAgg            <  1:1106217/100‑1 (MQ=255)
                                                                                         ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg           >  1:936304/1‑100 (MQ=255)
                                                                                         ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg           >  1:1993705/1‑100 (MQ=255)
                                                                                         ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg           <  2:1219730/100‑1 (MQ=255)
                                                                                           aTGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCa         <  2:1269611/100‑1 (MQ=255)
                                                                                            tGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCAt        >  1:2035597/1‑100 (MQ=255)
                                                                                              tCGCAGCAGCCGACCGTGCCTGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATgg      <  2:288058/100‑1 (MQ=255)
                                                                                               cGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGa     >  2:139874/1‑100 (MQ=255)
                                                                                                  agcagcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGcc  <  2:116753/100‑1 (MQ=255)
                                                                                                  agcagcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGcc  >  2:2134495/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
TATCCAGCGCGCCTGTAGCCAGGTTGACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCC  >  NC_000913/4627563‑4627760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.