New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4627662 =89 (1.020)4 (0.050) 3/170 NT 4.7% coding (348/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 4627688 = 78 (0.940)coding (374/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 105 total aligned reads displayed.

ACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGA  >  NC_000913/4627589‑4627786
                                                                                                   |                                                                                                  
aCGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCg                                                                                                    >  2:1938805/1‑100 (MQ=255)
   aGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                                 >  2:1420914/1‑100 (MQ=255)
    tcTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                                                <  2:553100/99‑1 (MQ=255)
    gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                                                <  1:702801/100‑1 (MQ=255)
    ccgatctatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                                                <  2:575835/94‑1 (MQ=255)
    ccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                                                >  1:1998447‑M1/70‑100 (MQ=255)
      tctccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                                 >  2:1864962‑M1/68‑97 (MQ=255)
      tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                                                                              >  1:1452985/1‑100 (MQ=255)
       gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTggaga                                                                                             >  1:553103/1‑97 (MQ=255)
       gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                                                                             >  1:403251/1‑100 (MQ=255)
         ccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCtgcgttgagatcg                                                                                           <  1:1864975‑M1/36‑7 (MQ=255)
          tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                                          <  2:1969795/100‑1 (MQ=255)
          tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                                          >  2:1942399/1‑100 (MQ=255)
          tatCATTATGGGTTTTGACGATACCCGCGCCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCCGCCGACCGTGCCGGATCGTCTGCGTTGGTTAtt                                                                                           <  2:2057440/99‑1 (MQ=255)
          cctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                                          >  1:1815291‑M1/64‑100 (MQ=255)
           atCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTggagatcgg                                                                                         >  1:575838/1‑93 (MQ=255)
           atCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGc                                                                                         >  2:2242044/1‑100 (MQ=255)
                tATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACt                                                                                    <  1:1334036/100‑1 (MQ=255)
                 aTGTGTTTTGACGATACCGGTGACCGGGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGGGTTGGTTATTGCACACtt                                                                                   >  2:466607/1‑100 (MQ=255)
                 aTGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtt                                                                                   >  2:1805764/1‑100 (MQ=255)
                  tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                                  <  2:240720/100‑1 (MQ=255)
                  tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                                  >  1:1895200/1‑100 (MQ=255)
                  tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                                  <  2:1518627/100‑1 (MQ=255)
                  tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                                  <  2:1037347/100‑1 (MQ=255)
                  tGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACttt                                                                                  >  1:634690/1‑100 (MQ=255)
                   gggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtttt                                                                                 >  2:1155055/1‑100 (MQ=255)
                   gggTTTTGACGATAACCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGACGACCGTGCCGGATAGTCTGCGTTGGTTATTGCAAACtttt                                                                                 <  2:2074896/100‑1 (MQ=255)
                    ggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                                                >  1:2095400/1‑100 (MQ=255)
                     gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                                               <  1:6326/100‑1 (MQ=255)
                     gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                                               <  1:2107600/100‑1 (MQ=255)
                        ttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAata                                                                            <  2:740420/100‑1 (MQ=255)
                          gACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                                          >  1:20882/1‑100 (MQ=255)
                           aCGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCa                                                                         >  1:775908/1‑100 (MQ=255)
                           aCGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCa                                                                         >  1:1346536/1‑100 (MQ=255)
                            cGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAata                                                                            >  2:2050461/1‑96 (MQ=255)
                             gATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTAGCAGCAGCCGCCCGTGCCGGATCGTCTGCGTTGGGTATTGCAAACTTTTAAATATCAGa                                                                       >  2:1485566/1‑100 (MQ=255)
                                 cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                                                   >  2:1135694/1‑100 (MQ=255)
                                 cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGCCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                                                   >  2:1135217/1‑100 (MQ=255)
                                   cGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAata                                                                 >  1:721782/1‑100 (MQ=255)
                                    gTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAatat                                                                <  1:428655/100‑1 (MQ=255)
                                      gACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTc                                                              >  2:1913615/1‑100 (MQ=255)
                                       aCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCg                                                             <  1:257991/100‑1 (MQ=255)
                                       aCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCg                                                             <  1:1798000/100‑1 (MQ=255)
                                         cgcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCa                                                           >  2:562611/1‑100 (MQ=255)
                                          gcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCAt                                                          <  2:585921/100‑1 (MQ=255)
                                             cgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCa                                                       >  1:1285390/1‑100 (MQ=255)
                                               tggttCGAATACTGTGCTATGTCGCAGCATTCGACCGTGCCGTATCGTCTGCGTTTTTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATg                                                     <  2:1613783/98‑1 (MQ=255)
                                                tgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGc                                                    <  2:1218113/100‑1 (MQ=255)
                                                tgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGc                                                    >  2:2117085/1‑100 (MQ=255)
                                                 gttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCt                                                   >  2:2000341/1‑100 (MQ=255)
                                                  ttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCtt                                                  >  1:996654/1‑100 (MQ=255)
                                                   tCGAAGACAGTGCCATGTCGCAGCAGCCGATCGTGCCGGATCGTCTGAGTTGGTTATTGCAAAATATTAAAAATCAGAAAAATAATCGCATTAATGCtt                                                  >  1:143063/1‑99 (MQ=255)
                                                   tCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCttt                                                 <  1:1155060/100‑1 (MQ=255)
                                                   tCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTAATGCttt                                                 >  1:781686/1‑100 (MQ=255)
                                                    cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTc                                                <  1:1383574/100‑1 (MQ=255)
                                                    cGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCACTCATGCTTTc                                                <  2:304022/100‑1 (MQ=255)
                                                      aaGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCa                                               <  2:916384/99‑1 (MQ=255)
                                                       aGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                                             <  2:1120519/100‑1 (MQ=255)
                                                         aCAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGa                                           <  1:1312054/100‑1 (MQ=255)
                                                         aCAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGa                                           >  1:418881/1‑100 (MQ=255)
                                                          cAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGaa                                          >  2:1339198/1‑100 (MQ=255)
                                                          cAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGaa                                          >  2:355130/1‑100 (MQ=255)
                                                           aGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAag                                         <  2:1285384/100‑1 (MQ=255)
                                                            gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga                                        >  1:1760481/1‑100 (MQ=255)
                                                            gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga                                        >  1:1413901/1‑100 (MQ=255)
                                                              gCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATACTCGCATTCATGCTTTCAACGAAGAgg                                      <  1:1106217/100‑1 (MQ=255)
                                                              caataaccaacgcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAgg                                      >  1:1815291‑M2/38‑100 (MQ=255)
                                                               ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg                                     <  2:1219730/100‑1 (MQ=255)
                                                               ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg                                     >  1:936304/1‑100 (MQ=255)
                                                               ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg                                     >  1:1993705/1‑100 (MQ=255)
                                                                 aTGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCa                                   <  2:1269611/100‑1 (MQ=255)
                                                                  tGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCAt                                  >  1:2035597/1‑100 (MQ=255)
                                                                    tCGCAGCAGCCGACCGTGCCTGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATgg                                <  2:288058/100‑1 (MQ=255)
                                                                    ccaacgcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATgg                                >  1:1998447‑M2/32‑100 (MQ=255)
                                                                     caacgcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAagagggaga                                  >  2:1864962‑M2/31‑94 (MQ=255)
                                                                     cGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGa                               >  2:139874/1‑100 (MQ=255)
                                                                        agcagcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGcc                            <  2:116753/100‑1 (MQ=255)
                                                                        agcagcCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGcc                            >  2:2134495/1‑100 (MQ=255)
                                                                           AGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTa                         >  1:1151293‑M1/1‑100 (MQ=255)
                                                                           AGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTa                         >  2:65798‑M1/1‑100 (MQ=255)
                                                                            GCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTAt                        <  2:708108‑M1/100‑1 (MQ=255)
                                                                             ccGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATc                       <  2:2280770/100‑1 (MQ=255)
                                                                                aCCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATcc                      <  2:403248/98‑1 (MQ=255)
                                                                                 ccGTGCCGGATTCTCTGCGTTGGTTATTGCAAACTTTTAAATATCACAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATc                       <  2:1375356/96‑1 (MQ=255)
                                                                                 ccGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCa                   >  1:1074252/1‑100 (MQ=255)
                                                                                   gTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACg                 >  1:1880668/1‑100 (MQ=255)
                                                                                   gTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACg                 >  2:203616/1‑100 (MQ=255)
                                                                                       cGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTg             <  2:561904/100‑1 (MQ=255)
                                                                                        ggATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTgg            >  2:304516/1‑100 (MQ=255)
                                                                                        ggATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTgg            >  2:421503/1‑100 (MQ=255)
                                                                                         gATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTggg           <  1:292921/100‑1 (MQ=255)
                                                                                          aTCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGa          >  2:1975088/1‑100 (MQ=255)
                                                                                           tCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAt         <  1:1407350/100‑1 (MQ=255)
                                                                                            cGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtg        <  1:46148/100‑1 (MQ=255)
                                                                                              tCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtg      <  1:1695827/100‑1 (MQ=255)
                                                                                              tCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtg      >  2:2097196/1‑100 (MQ=255)
                                                                                                tgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtgtg    >  1:1132964‑M2/4‑100 (MQ=255)
                                                                                                 gcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTgg   <  2:1122246‑M2/98‑1 (MQ=255)
                                                                                                  cGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGa  <  1:498482‑M2/99‑1 (MQ=255)
                                                                                                  cGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGa  <  1:720680‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
ACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGA  >  NC_000913/4627589‑4627786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.