New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 526253	NA (NA)	3 (0.040)	3/168	NT	100%	coding (2993/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 526279	0 (0.000)					coding (3019/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTC  >  NC_000913/526176‑526349                                                                              |                                                                                                 cGAGCGGTCCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTAC                                                                            >  1:1493373‑M2/1‑100 (MQ=255) cGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTAC                                                                            >  1:274752‑M2/1‑100 (MQ=255) cGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTAC                                                                            <  2:364894‑M2/100‑1 (MQ=255)  gAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACG                                                                           >  1:1274714‑M2/1‑100 (MQ=255)  gAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACG                                                                           >  1:1718603‑M2/1‑100 (MQ=255)  gAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACG                                                                           >  1:2276725‑M2/1‑100 (MQ=255)  gAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACG                                                                           >  2:1624360‑M2/1‑100 (MQ=255)   aGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGA                                                                          <  1:1569690‑M2/100‑1 (MQ=255)    gCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGAC                                                                         >  1:1571087‑M2/1‑100 (MQ=255)    gCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGAC                                                                         <  1:1690358‑M2/100‑1 (MQ=255)     cGGCCCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACC                                                                        >  2:977980‑M2/1‑100 (MQ=255)     cGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACC                                                                        >  1:1972338‑M2/1‑100 (MQ=255)      ggACCCACCACTACCACTCCGACAGCCAGCANCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCNCTACCTCTACGACC                                                                        >  1:274389‑M2/1‑99 (MQ=255)                                                                         gCCACTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtg    <  2:967102‑M2/100‑69 (MQ=255)                                                                           cACTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtggg  <  1:539326‑M2/100‑71 (MQ=255)                                                                              |                                                                                                 CGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTC  >  NC_000913/526176‑526349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.