New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 526253	NA (NA)	3 (0.040)	3/168	NT	100%	coding (2993/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 526279	0 (0.000)					coding (3019/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC  >  NC_000913/526180‑526377                                                                                                    |                                                                                                   cGGCCCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACC                                                                                                    >  2:977980‑M2/1‑100 (MQ=255) cGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACC                                                                                                    >  1:1972338‑M2/1‑100 (MQ=255)  ggACCCACCACTACCACTCCGACAGCCAGCANCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCNCTACCTCTACGACC                                                                                                    >  1:274389‑M2/1‑99 (MQ=255)                                                                     gCCACTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtg                                <  2:967102‑M2/100‑69 (MQ=255)                                                                       cACTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtggg                              <  1:539326‑M2/100‑71 (MQ=255)                                                                           ggTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccg                          <  2:560030‑M2/100‑75 (MQ=255)                                                                                                cGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcac     <  1:1120704‑M2/100‑96 (MQ=255)                                                                                                cGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcac     <  2:1471042‑M2/100‑96 (MQ=255)                                                                                                 gACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcaca    <  1:1807933‑M2/100‑97 (MQ=255)                                                                                                 gACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcaca    <  2:966466‑M2/100‑97 (MQ=255)                                                                                                  aCCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcacac   <  1:1248065‑M2/100‑98 (MQ=255)                                                                                                  aCCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcacac   <  2:1967783‑M2/100‑98 (MQ=255)                                                                                                   ccagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcacacc  <  1:2226401‑M2/100‑99 (MQ=255)                                                                                                   ccagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcac     >  2:2254484‑M2/1‑2 (MQ=255)                                                                                                    |                                                                                                   CGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC  >  NC_000913/526180‑526377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.