New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 805951NA (NA)5 (0.060) 5/164 NT NA noncoding (148/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 805981 NA (NA)noncoding (178/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 119 total aligned reads displayed.

TGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATT  >  NC_000913/805855‑806050
                                                                                                |                                                                                                   
tGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgc                                                                                                   >  1:1968147‑M1/1‑97 (MQ=255)
 gTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccg                                                                                                 <  1:899310‑M1/100‑5 (MQ=255)
  tAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccgg                                                                                                >  1:1780231‑M1/1‑95 (MQ=255)
   aGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccgga                                                                                               >  1:1603553‑M1/1‑94 (MQ=255)
   aGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccgga                                                                                               >  1:1831495‑M1/1‑94 (MQ=255)
    ggCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggat                                                                                              >  1:945879‑M1/1‑93 (MQ=255)
    ggCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggat                                                                                              >  2:1198063‑M1/1‑93 (MQ=255)
    ggCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggat                                                                                              >  1:1874178‑M1/1‑93 (MQ=255)
    ggCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggat                                                                                              >  1:2146496‑M1/1‑93 (MQ=255)
    ggCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggat                                                                                              >  1:1457934‑M1/1‑93 (MQ=255)
    ggCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccgg                                                                                                >  2:1403276‑M1/1‑93 (MQ=255)
      ccAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATaa                                                                                            >  1:1567241/1‑100 (MQ=255)
       cAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAg                                                                                           >  2:663155/1‑100 (MQ=255)
       cAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAg                                                                                           <  2:854265/100‑1 (MQ=255)
        aGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAgg                                                                                          <  1:121993/100‑1 (MQ=255)
        aGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAgg                                                                                          >  1:488039/1‑100 (MQ=255)
          aTAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCg                                                                                        <  2:2251513/100‑1 (MQ=255)
           tAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGt                                                                                       >  1:1687843/1‑100 (MQ=255)
            aaGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGtt                                                                                      <  1:2091150/100‑1 (MQ=255)
              ggCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTa                                                                                    <  2:1213806/100‑1 (MQ=255)
              ggCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTa                                                                                    >  2:1980274/1‑100 (MQ=255)
               gCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTAc                                                                                   >  1:2343593/1‑100 (MQ=255)
                cATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTAcg                                                                                  >  1:881276/1‑100 (MQ=255)
                cATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTAcg                                                                                  <  1:1211545/100‑1 (MQ=255)
                cATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTGGCGCATCTTATCCGACCTAAAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTAcg                                                                                  >  2:1286555/1‑100 (MQ=255)
                 aTTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTAcgc                                                                                 <  2:1190351/100‑1 (MQ=255)
                   tttCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTAcgccg                                                                               <  1:663158/100‑1 (MQ=255)
                   tttCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCACATCGAACCGTAGGCCGGATAAGGCGTTTAcgccg                                                                               <  1:627113/100‑1 (MQ=255)
                       gcagcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatc                                                                           <  2:100762‑M1/100‑27 (MQ=255)
                        cagcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCGGACCGGCAAATCGCATCGAACCGTAGGGCGGAGAAGGCGTGTACGCCGCA                                                                             <  2:1996797‑M2/97‑1 (MQ=255)
                        cagcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatcc                                                                          <  1:612733‑M1/100‑28 (MQ=255)
                         agcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccg                                                                         <  1:652776‑M1/100‑29 (MQ=255)
                          gcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccgg                                                                        <  2:2138484‑M1/100‑30 (MQ=255)
                             tCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCaa                                                                     <  1:1325974/100‑1 (MQ=255)
                              ccGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCaaa                                                                    <  1:2136387/100‑1 (MQ=255)
                               cGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAAt                                                                   <  1:623814/100‑1 (MQ=255)
                               cGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAAt                                                                   >  2:2037716/1‑100 (MQ=255)
                                ggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATa                                                                  <  2:385215/100‑1 (MQ=255)
                                ggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATa                                                                  <  2:1027997/100‑1 (MQ=255)
                                  cACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGt                                                                >  2:1788906/1‑100 (MQ=255)
                                      tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAAt                                                            >  1:1955849/1‑100 (MQ=255)
                                      tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGGAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTaa                                                             >  2:563036/1‑99 (MQ=255)
                                        ttGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccggcctacggttcgatg                                                          <  1:2150347‑M1/100‑44 (MQ=255)
                                           tCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGctc                                                       >  1:1618448/1‑100 (MQ=255)
                                           tCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGct                                                        <  2:767535/99‑1 (MQ=255)
                                            cGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGctct                                                      <  1:1918093/100‑1 (MQ=255)
                                            cGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGctct                                                      >  1:804854/1‑100 (MQ=255)
                                             ggATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCtt                                                     <  1:2335451/100‑1 (MQ=255)
                                             ggATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCtt                                                     <  2:1079748/100‑1 (MQ=255)
                                             ggATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCtt                                                     >  1:830315/1‑100 (MQ=255)
                                              gatgcgatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTa                                                    <  1:1994950/100‑1 (MQ=255)
                                               atgagatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGCAGGGCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTAc                                                   <  1:1105628/100‑1 (MQ=255)
                                                tgcgatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTAct                                                  <  1:341355/100‑1 (MQ=255)
                                                tgcgatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTAct                                                  >  1:2020771/1‑100 (MQ=255)
                                                tgcgatgcGTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTAct                                                  <  2:709180/100‑1 (MQ=255)
                                                  cgatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTActtc                                                >  2:409725/1‑100 (MQ=255)
                                                  cgatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTActtc                                                >  2:1658944/1‑100 (MQ=255)
                                                  ccatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTActtc                                                >  1:1588880/3‑100 (MQ=255)
                                                     tgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGGCGGATTAGGCGTTTACGCCGCATCCGGAAAATAGTCAATTGCTCTTACttcttc                                             >  2:1558509/1‑100 (MQ=37)
                                                       cTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGc                                           >  2:2114561/1‑100 (MQ=255)
                                                        ttGCGCATCTTATCCGACCTACAAATCGCATCGCACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGcc                                          <  2:1968132/100‑1 (MQ=255)
                                                        ttGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGcc                                          <  1:1605030/100‑1 (MQ=255)
                                                         tGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCct                                         >  1:2160425/1‑100 (MQ=255)
                                                         tGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCct                                         >  1:1705242/1‑100 (MQ=255)
                                                          gcgcATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCctc                                        <  1:104950/100‑1 (MQ=255)
                                                           cgcATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCctct                                       >  1:223511/1‑100 (MQ=255)
                                                           cgcATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCAGGATAAGGCGTTTACGCCGCATACGGCACATAGTTAATTGTTCTTAATTCTTCGCctct                                       >  2:1155397/1‑100 (MQ=25)
                                                            gcATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTg                                      <  2:113325/100‑1 (MQ=255)
                                                            gcATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTg                                      >  2:718217/1‑100 (MQ=255)
                                                             cATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGc                                     <  2:1874165/100‑1 (MQ=255)
                                                                 ttATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAAcc                                 <  2:1717209/100‑1 (MQ=255)
                                                                    tCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACt                              <  1:1362970/100‑1 (MQ=255)
                                                                    tCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACt                              <  2:83709/100‑1 (MQ=255)
                                                                      cGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACttt                            >  2:254607/1‑100 (MQ=255)
                                                                      cGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACttt                            <  2:843446/100‑1 (MQ=255)
                                                                      cGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACttt                            <  2:1708162/100‑1 (MQ=255)
                                                                      cGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACttt                            <  2:1590053/100‑1 (MQ=255)
                                                                          cTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtacta                        >  1:2098930/1‑100 (MQ=255)
                                                                          cTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtacta                        <  2:1078707/100‑1 (MQ=255)
                                                                           tACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtactac                       <  2:2175210/100‑1 (MQ=255)
                                                                           tACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtactac                       >  1:1071872/1‑100 (MQ=255)
                                                                            aCAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTAcc                      >  2:307880/1‑100 (MQ=255)
                                                                             cAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTAccc                     <  1:1788919/100‑1 (MQ=255)
                                                                             cAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTAccc                     <  2:683781/100‑1 (MQ=255)
                                                                                aTCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAcg                  <  2:881272/100‑1 (MQ=255)
                                                                                aTCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAcg                  >  1:311365/1‑100 (MQ=255)
                                                                                   gCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAcgccg               >  1:2047957/1‑100 (MQ=255)
                                                                                   gCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAcgccg               >  2:1742680/1‑100 (MQ=255)
                                                                                   gCACCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAcgccg               >  1:147469/1‑100 (MQ=255)
                                                                                    cATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaa              <  1:2150347‑M2/100‑58 (MQ=255)
                                                                                      tCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCgg            >  2:1777345/1‑100 (MQ=255)
                                                                                       cGAACCGTAGGCCGGATAATGCGTGTACGCCGCATCCGGCAAATAGTGAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCgg            <  2:2085846/99‑1 (MQ=255)
                                                                                       cGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGt           <  1:190037/100‑1 (MQ=255)
                                                                                       cGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGt           <  1:1298417/100‑1 (MQ=255)
                                                                                        gAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGtt          <  1:1074520/100‑1 (MQ=255)
                                                                                          aCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTAt        <  2:1146355/100‑1 (MQ=255)
                                                                                           ccGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTAtt       <  2:1100693/100‑1 (MQ=255)
                                                                                            cGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTg      <  2:719332/100‑1 (MQ=255)
                                                                                                ggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTAtt  >  2:565871/1‑100 (MQ=255)
                                                                                                ggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTAtt  >  1:1819115/1‑100 (MQ=255)
                                                                                                |                                                                                                   
TGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATT  >  NC_000913/805855‑806050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.