New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 805951NA (NA)5 (0.060) 5/164 NT NA noncoding (148/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 = 805981 NA (NA)noncoding (178/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 140 total aligned reads displayed.

ATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTC  >  NC_000913/805883‑806079
                                                                                                  |                                                                                                  
aTCCGGCACTTATTGTCGGATGCGATGCTTGCGCTTCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGTCGCTTCCGGCa                                                                                                   <  2:1239584/100‑1 (MQ=255)
 tCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCaa                                                                                                  <  1:1325974/100‑1 (MQ=255)
  ccGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCaaa                                                                                                 <  1:2136387/100‑1 (MQ=255)
    ggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATa                                                                                               <  2:385215/100‑1 (MQ=255)
          tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAAt                                                                                         >  1:1955849/1‑100 (MQ=255)
          tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGGAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTaa                                                                                          >  2:563036/1‑99 (MQ=255)
             tGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGc                                                                                      >  2:293378/1‑100 (MQ=255)
             ngTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGc                                                                                      >  2:760870/2‑100 (MQ=255)
               tCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGctc                                                                                    >  1:1618448/1‑100 (MQ=255)
               tCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGct                                                                                     <  2:767535/99‑1 (MQ=255)
                cGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGctct                                                                                   >  1:804854/1‑100 (MQ=255)
                 ggATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCtt                                                                                  <  1:2335451/100‑1 (MQ=255)
                 ggATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCtt                                                                                  <  2:1079748/100‑1 (MQ=255)
                 ggATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCtt                                                                                  >  1:2125472/1‑100 (MQ=255)
                  gatgcgatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTa                                                                                 <  1:1994950/100‑1 (MQ=255)
                    tgcgatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTAct                                                                               <  1:341355/100‑1 (MQ=255)
                    tgcgatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTAct                                                                               >  1:2020771/1‑100 (MQ=255)
                    tgcgatgcGTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTAct                                                                               <  2:709180/100‑1 (MQ=255)
                      cgatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTActtc                                                                             >  2:409725/1‑100 (MQ=255)
                      ccatgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTActtc                                                                             >  1:1588880/3‑100 (MQ=255)
                         tgcTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGGCGGATTAGGCGTTTACGCCGCATCCGGAAAATAGTCAATTGCTCTTACttcttc                                                                          >  2:1558509/1‑100 (MQ=37)
                           cTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGc                                                                        >  2:2114561/1‑100 (MQ=255)
                            ttGCGCATCTTATCCGACCTACAAATCGCATCGCACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGcc                                                                       <  2:1968132/100‑1 (MQ=255)
                             tGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCct                                                                      >  1:2160425/1‑100 (MQ=255)
                              gcgcATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCctc                                                                     <  1:104950/100‑1 (MQ=255)
                               cgcATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCAGGATAAGGCGTTTACGCCGCATACGGCACATAGTTAATTGTTCTTAATTCTTCGCctct                                                                    >  2:1155397/1‑100 (MQ=25)
                                 cATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGc                                                                  <  2:1133121/100‑1 (MQ=255)
                                 cATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGc                                                                  <  2:1874165/100‑1 (MQ=255)
                                     ttATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAAcc                                                              <  2:1717209/100‑1 (MQ=255)
                                        tCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACt                                                           <  1:1362970/100‑1 (MQ=255)
                                          cGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACttt                                                         <  2:1590053/100‑1 (MQ=255)
                                          cGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACttt                                                         <  2:1708162/100‑1 (MQ=255)
                                          cGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACttt                                                         <  2:843446/100‑1 (MQ=255)
                                              cTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtacta                                                     >  1:2098930/1‑100 (MQ=255)
                                               tACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtactac                                                    >  1:955796/1‑100 (MQ=255)
                                               tACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtactac                                                    <  2:2175210/100‑1 (MQ=255)
                                               tACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTtactac                                                    >  1:1071872/1‑100 (MQ=255)
                                                aCAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTAcc                                                   >  2:307880/1‑100 (MQ=255)
                                                 cAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTAccc                                                  <  1:1788919/100‑1 (MQ=255)
                                                 cAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTAccc                                                  <  2:683781/100‑1 (MQ=255)
                                                   aaTCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAc                                                <  1:678671/100‑1 (MQ=255)
                                                    aTCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAcg                                               <  2:881272/100‑1 (MQ=255)
                                                       gCACCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCAcgccg                                            >  1:147469/1‑100 (MQ=255)
                                                        cATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaa                                           <  1:2150347‑M2/100‑58 (MQ=255)
                                                          tCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCgg                                         >  2:1777345/1‑100 (MQ=255)
                                                           cGAACCGTAGGCCGGATAATGCGTGTACGCCGCATCCGGCAAATAGTGAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCgg                                         <  2:2085846/99‑1 (MQ=255)
                                                           cGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGt                                        <  1:190037/100‑1 (MQ=255)
                                                            gAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGtt                                       >  1:1670578/1‑100 (MQ=255)
                                                            gAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGtt                                       <  1:1074520/100‑1 (MQ=255)
                                                              aCCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTAt                                     <  2:1146355/100‑1 (MQ=255)
                                                               ccGTAGGCCGGATAAGGCGTTTACGCCGCGTCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTAtt                                    >  1:510299/1‑100 (MQ=255)
                                                               ccGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTAtt                                    <  2:1100693/100‑1 (MQ=255)
                                                                cGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTg                                   <  2:719332/100‑1 (MQ=255)
                                                                 gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGt                                  <  1:183284/100‑1 (MQ=255)
                                                                    ggCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTAtt                               >  2:565871/1‑100 (MQ=255)
                                                                     gCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTc                              >  1:1755942/1‑100 (MQ=255)
                                                                     gCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTc                              >  2:1052705/1‑100 (MQ=255)
                                                                       cGGATAAGGCGTTTACGCCGCATCCGGCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgct                            <  1:652776‑M2/100‑73 (MQ=255)
                                                                        ggATAAGGCGTTTACGCCGCATCCGGCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctg                           <  1:612733‑M2/100‑74 (MQ=255)
                                                                        ggATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCca                           <  2:279296/100‑1 (MQ=255)
                                                                        ggATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCca                           <  2:1380389/100‑1 (MQ=255)
                                                                         gATAAGGCGTTTACGCCGCATCCGGCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgc                          <  2:100762‑M2/100‑75 (MQ=255)
                                                                         gATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCcac                          <  2:1788605/100‑1 (MQ=255)
                                                                            aaGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATg                       >  1:1783591/1‑100 (MQ=255)
                                                                             aGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGc                      >  1:1837670/1‑100 (MQ=255)
                                                                             aGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGc                      >  1:1108727/1‑100 (MQ=255)
                                                                              ggCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCg                     >  1:1248982/1‑100 (MQ=255)
                                                                              ggCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCg                     >  1:840401/1‑100 (MQ=255)
                                                                                cGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACGACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCg                     >  2:1500793/1‑98 (MQ=255)
                                                                                cGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGt                   <  1:751669/100‑1 (MQ=255)
                                                                                cGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGt                   >  2:1826835/1‑100 (MQ=255)
                                                                                   ttACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGt                <  2:2125454/100‑1 (MQ=255)
                                                                                   ttACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGt                <  2:531759/100‑1 (MQ=255)
                                                                                   ttACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGt                >  2:1811556/1‑100 (MQ=255)
                                                                                    tACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGta               <  2:1831482/100‑1 (MQ=255)
                                                                                     aCGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtag              <  1:1980289/100‑1 (MQ=255)
                                                                                     aCGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtag              <  1:1198068/100‑1 (MQ=255)
                                                                                     aCGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtag              <  1:1286561/100‑1 (MQ=255)
                                                                                      cgccgcATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtagt             >  1:190627/1‑100 (MQ=255)
                                                                                      cgccgcATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtagt             >  1:1759085/1‑100 (MQ=255)
                                                                                      cgccgcATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtagt             >  1:727239/1‑100 (MQ=255)
                                                                                      cgccgcATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtagt             >  1:1254168/1‑100 (MQ=255)
                                                                                       gccgcATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtagtt            >  1:961149/1‑100 (MQ=255)
                                                                                        ccgcATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtagtta           <  1:1742692/100‑1 (MQ=255)
                                                                                          gcATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGtagttagt         <  2:1457926/100‑1 (MQ=255)
                                                                                           cATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAgtg        >  1:316052/1‑100 (MQ=255)
                                                                                            aTCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAgtgt       >  2:1557551/1‑100 (MQ=255)
                                                                                            aTCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAgtg        <  2:1071867/99‑1 (MQ=255)
                                                                                            aTCCGGCAAATAGTTAATTGCTCTCACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCAGCGGTTATTGTATCCCCACATGCTGTTGTAGTTAgtgt       <  2:2176718/100‑1 (MQ=255)
                                                                                             tCCGGCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcct      >  1:1603553‑M2/1‑6 (MQ=255)
                                                                                             tCCGGCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcct      >  1:1831495‑M2/1‑6 (MQ=255)
                                                                                             tCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTc      >  1:2329404/1‑100 (MQ=255)
                                                                                              ccGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCa     >  2:1479609/1‑100 (MQ=255)
                                                                                              ccGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCa     >  2:1278561/1‑100 (MQ=255)
                                                                                               cGGCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctac    <  2:1704657‑M2/100‑97 (MQ=255)
                                                                                               cGGCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctac    <  1:899310‑M2/100‑97 (MQ=255)
                                                                                               cGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCAt    >  1:481779/1‑100 (MQ=255)
                                                                                                 gCctacggttcgatgcgatttgtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctaca   >  1:1968147‑M2/1‑2 (MQ=255)
                                                                                                 gCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTc  <  1:2354215/100‑1 (MQ=255)
                                                                                                 gCAAATAGTTAATTGCTCTTACGTCTGCGCCTCTGCAACCACTTTACTACCCACGCCGCGTTTATTGTATTCCCACATGCGGTTGTAGTGAGGTTCATTc  >  2:1649123/1‑100 (MQ=255)
                                                                                                  |                                                                                                  
ATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAATAGTTAATTGCTCTTACTTCTTCGCCTCTGCAACCACTTTACTACCCACGCCGCGGTTATTGTATTCCCACATGCGGTTGTAGTTAGTGTCATTC  >  NC_000913/805883‑806079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.