New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 832307 =NA (NA)4 (0.050) 3/164 NT NA noncoding (19/98 nt) RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 2714290 = NA (NA)noncoding (8/98 nt) RIP188 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP188 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 106 total aligned reads displayed.

GTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGT  >  NC_000913/832208‑832406
                                                                                                    |                                                                                                   
gTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTa                                                                                                     <  2:2157323/100‑1 (MQ=255)
   cgcgTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCCAAACTGCCTGATGCGCTACGCTTATCa                                                                                                  >  2:217341/1‑100 (MQ=255)
   attcatgccggatgcggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgtagcgcATc                                                                                                   >  2:1508982‑M1/98‑100 (MQ=255)
    ttcatgccggatgcggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgtagcgcATCa                                                                                                  >  1:575912‑M1/97‑100 (MQ=255)
    gcgTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                                 >  2:310184/1‑100 (MQ=255)
    gcgTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                                 <  1:707344/100‑1 (MQ=255)
     tcatgccggatgcggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgtagcgcATCAg                                                                                                 >  2:803145‑M1/96‑100 (MQ=255)
     tcatgccggatgcggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgtagcgcATCAg                                                                                                 <  2:629011‑M1/5‑1 (MQ=255)
     cgTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAgg                                                                                                >  2:10326/1‑100 (MQ=255)
     cgTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                                 >  2:10604/1‑99 (MQ=255)
      gTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGc                                                                                               <  1:361350/100‑1 (MQ=255)
      catgccggatgcggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgttatgcgtagctcatca                                                                                                  <  1:43028‑M1/4‑1 (MQ=255)
      catgccggatgcggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgtagcgcATCAgg                                                                                                <  1:1430820‑M1/6‑1 (MQ=255)
       atgccggatgcggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgtagcgcATCAGGc                                                                                               >  1:31606‑M1/94‑100 (MQ=255)
        aaaCCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCt                                                                                             >  2:1723060/1‑100 (MQ=255)
         aaCCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                            >  2:837068/1‑100 (MQ=255)
           ccTGCCGCTGCGCAGTAATCTTTTATGCCGTGCTATGCCCGGCATCCGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACACTTATCa                                                                                                  >  2:2272038/1‑92 (MQ=255)
           ccTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACg                                                                                          <  1:448261/100‑1 (MQ=255)
           ccTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACg                                                                                          >  1:1564578/1‑100 (MQ=255)
           ccTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACg                                                                                          >  2:411798/1‑100 (MQ=255)
             tGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTg                                                                                        <  2:1508385/100‑1 (MQ=255)
             tGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTg                                                                                        >  2:1862/1‑100 (MQ=255)
             tGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTg                                                                                        >  2:471854/1‑100 (MQ=255)
              gCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGa                                                                                       >  1:1353481/1‑100 (MQ=255)
                  cTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCGTACGTGAActc                                                                                   >  2:2139733/1‑100 (MQ=255)
                     cgcAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGc                                                                                <  2:358684/100‑1 (MQ=255)
                     cgcAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGc                                                                                <  2:1538946/100‑1 (MQ=255)
                     cgcAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGc                                                                                <  1:1398663/100‑1 (MQ=255)
                      gcAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCa                                                                               <  2:420573/100‑1 (MQ=255)
                      gcAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCa                                                                               >  1:602167/1‑100 (MQ=255)
                       cAGTAATCTTTTCTGCCGGGCTATGCTCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCaa                                                                              <  2:448101/100‑1 (MQ=255)
                       cAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCaa                                                                              >  1:53570/1‑100 (MQ=255)
                       cAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCaa                                                                              <  2:1324422/100‑1 (MQ=255)
                       cAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCa                                                                               >  1:487551/1‑99 (MQ=255)
                        aGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAat                                                                             <  1:2155328/100‑1 (MQ=255)
                        aGTAATCTTTTATGCCGGGCTATGCCCGGCAGCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAat                                                                             <  2:499040/100‑1 (MQ=255)
                         gTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAata                                                                            >  2:100162/1‑100 (MQ=255)
                          tAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGACGAACAAACGCAAAACTGCCGGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAatat                                                                           <  2:1287681/100‑1 (MQ=255)
                            aTCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAatatat                                                                         <  1:385358/100‑1 (MQ=255)
                              gcctgaTGCCGGGCATAGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTg                                                                       >  1:169257/6‑100 (MQ=25)
                                ctgaTGCCGGGCATAGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGaa                                                                     >  2:639366/4‑100 (MQ=25)
                                    tGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTg                                                                 >  2:2294080/1‑100 (MQ=255)
                                    tGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTg                                                                 <  2:737712/100‑1 (MQ=255)
                                     gCCGGGCTATGCCCGGCATCAGGCTGATTAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGc                                                                <  1:412562/100‑1 (MQ=255)
                                     gCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTg                                                                 <  1:450743/99‑1 (MQ=255)
                                      ccGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCa                                                               >  2:1950432/1‑100 (MQ=255)
                                       cGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGc                                                                <  2:2009246/98‑1 (MQ=255)
                                        gggCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATg                                                             <  1:88504/100‑1 (MQ=255)
                                           cTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCtt                                                          >  1:980971/1‑100 (MQ=255)
                                             aTGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCtttt                                                        >  2:1170207/1‑100 (MQ=255)
                                                 cccGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTa                                                     <  1:1156706/100‑1 (MQ=255)
                                                     gCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGcc                                                 <  2:513202/100‑1 (MQ=255)
                                                      cttCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCg                                                >  2:1010911/3‑100 (MQ=255)
                                                           ggCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATaa                                           >  2:2212706/1‑100 (MQ=255)
                                                            gCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAg                                          >  2:2274145/1‑100 (MQ=255)
                                                             cTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAgg                                         <  1:1006913/100‑1 (MQ=255)
                                                             cTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAgg                                         <  1:1559968/100‑1 (MQ=255)
                                                                 tgaACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGtt                                     >  1:1253435/1‑100 (MQ=255)
                                                                  gaACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGttt                                    >  2:779052/1‑100 (MQ=255)
                                                                   aacgaacgCAAAAGTGCCGGATGCGCTACGCTGATCAGGCTTACGTGACATCGGCAATATATTGAGTTTGCATGCTTTTGTAGGCCGGATAAGGCGt                                      <  2:2065657/97‑1 (MQ=11)
                                                                   aaCAAACGCAAACCTGCCTGCTGCGCTACGCTTATCAGGCCTACGTGAACTTTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTa                                   <  2:795926/100‑1 (MQ=255)
                                                                   aaCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGGCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGttt                                    <  2:726212/99‑1 (MQ=255)
                                                                   aaCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATGCGGCGtaaa                                   <  2:1344479/100‑4 (MQ=255)
                                                                   aaCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTa                                   <  1:216128/100‑1 (MQ=255)
                                                                     cAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTAcg                                 >  2:1272016/1‑100 (MQ=255)
                                                                       aaCGCAAACCTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTAcgcc                               <  2:1273209/100‑1 (MQ=255)
                                                                       aaCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCCTGCTTTTGTAGGCCGGATAAGGCGTTTAcgcc                               >  1:2179571/1‑100 (MQ=255)
                                                                       aaCGCAAAACTGCCTGATGCGCTACGCTGATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTAcgcc                               <  1:217342/100‑1 (MQ=255)
                                                                         cGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTAcgccgc                             >  1:121007/1‑100 (MQ=255)
                                                                           cAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCAt                           >  2:459533/1‑100 (MQ=255)
                                                                           cAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCAt                           >  1:139005/1‑100 (MQ=255)
                                                                            acgtaggcctgataagcgtagcgcATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATc                          <  1:2155023‑M1/76‑1 (MQ=255)
                                                                              aaCTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATGCGGCGTAAAcgccttatccg                        <  1:759395/100‑8 (MQ=17)
                                                                               aCTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                       <  2:120363/100‑1 (MQ=255)
                                                                                cTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                      >  1:1294228/1‑100 (MQ=255)
                                                                                 tGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                     <  2:1353474/100‑1 (MQ=255)
                                                                                 tGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                     <  1:145959/100‑1 (MQ=255)
                                                                                 tGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                     <  1:1949807/100‑1 (MQ=255)
                                                                                 ggcctgataagcgtagcgcATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                     <  2:1804306‑M1/81‑1 (MQ=255)
                                                                                 ggcctgataagcgtagcgcATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                     <  1:10721‑M1/81‑1 (MQ=255)
                                                                                  gcctgataagcgtagcgcATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAt                    <  2:2035077‑M1/82‑1 (MQ=255)
                                                                                    cTGATGCGCTACGCTTATCAGGCCTACGTGAACCCTCCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGTATCCGGCAttt                  <  1:472565/100‑1 (MQ=255)
                                                                                     ttaTGCGCTACGCTTATCAGGCCTACGTCAACTCTGTAATATATTGAATTCGCATGCTTTTGTAGGCCGAATAAGGCGTTTACGCCGCATCCGGCAttta                 <  2:1435490/98‑2 (MQ=14)
                                                                                     tGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTc                 >  1:186163/1‑100 (MQ=255)
                                                                                     tGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTc                 <  1:1723072/100‑1 (MQ=255)
                                                                                     tGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTc                 <  1:1170212/100‑1 (MQ=255)
                                                                                      gATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTca                >  1:2096540/1‑100 (MQ=255)
                                                                                      gATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTca                >  2:1550944/1‑100 (MQ=255)
                                                                                       ctGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTcac               <  2:2193614/99‑1 (MQ=255)
                                                                                         gcgcTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTcacag             >  1:2193633/1‑99 (MQ=255)
                                                                                          cgcTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCacaac            <  2:1156241/100‑1 (MQ=255)
                                                                                           gcTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCacaaca           <  1:2294101/100‑1 (MQ=255)
                                                                                            cTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCAcaacaa          <  1:1516834/100‑1 (MQ=255)
                                                                                            cTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCAcaacaa          >  2:1630946/1‑100 (MQ=255)
                                                                                            cTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCAcaacaa          <  2:1558214/100‑1 (MQ=255)
                                                                                              aCGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAg         >  2:2185125/1‑99 (MQ=255)
                                                                                               cGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCa       <  1:310186/100‑1 (MQ=255)
                                                                                               cGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCa       >  1:1106808/1‑100 (MQ=255)
                                                                                                   tATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTg   >  1:293238/1‑100 (MQ=255)
                                                                                                    ATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGACCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGt  <  1:129774‑M1/100‑1 (MQ=255)
                                                                                                    |                                                                                                   
GTCCGCGTAAACCTGCCGCTGCGCAGTAATCTTTTATGCCGGGCTATGCCCGGCATCAGGCTGATGAACAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGT  >  NC_000913/832208‑832406

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.