New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 832307 =NA (NA)4 (0.050) 3/164 NT NA noncoding (19/98 nt) RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP75 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 2714290 = NA (NA)noncoding (8/98 nt) RIP188 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP188 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

AAGCGGAACGGGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAA  >  NC_000913/2714191‑2714389
                                                                                                   |                                                                                                   
aaGCGGAACGGGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATg                                                                                                     >  2:123678/1‑100 (MQ=255)
aaGCGGAACGGGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATg                                                                                                     >  2:501044/1‑100 (MQ=255)
aaGCGGAACGGGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATg                                                                                                     >  1:1520140/1‑100 (MQ=255)
   cGGAACGGGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATgcgc                                                                                                  <  2:6961/100‑1 (MQ=255)
   cGGAACGGGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATgcgc                                                                                                  >  2:1527777/1‑100 (MQ=255)
    ggAACGGGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGAATTGAAAGTGCTGCCAAACGCAAAACTGCCTGATgcgc                                                                                                  >  2:1887364/1‑99 (MQ=255)
        cGGGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGc                                                                                             <  2:1629042/100‑1 (MQ=255)
         gggCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCt                                                                                            <  2:1798207/100‑1 (MQ=255)
         gggCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCt                                                                                            <  1:1650260/100‑1 (MQ=255)
           gCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTa                                                                                          <  2:1707478/100‑1 (MQ=255)
            cGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTAt                                                                                         >  1:1850598/1‑100 (MQ=255)
             gTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATc                                                                                        <  1:49699/100‑1 (MQ=255)
              tGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCa                                                                                       >  2:1297194/1‑100 (MQ=255)
              tGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCa                                                                                       <  2:1406913/100‑1 (MQ=255)
              tGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCa                                                                                       <  1:993275/100‑1 (MQ=255)
               gCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAg                                                                                      >  1:732757/1‑100 (MQ=255)
                ccACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAgg                                                                                     <  1:334789/100‑1 (MQ=255)
                ccACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAgg                                                                                     <  1:336316/100‑1 (MQ=255)
                ccACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAgg                                                                                     <  1:128307/100‑1 (MQ=255)
                 atgccggatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattcaatatattgcagagttcacgtaggcctgatGCGCTACGCTTATCAGGc                                                                                    <  2:2035077‑M2/18‑1 (MQ=255)
                  tgccggatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattcaatatattgcagagttcacgtaggcctgatGCGCTACGCTTATCAGGcc                                                                                   <  2:1804306‑M2/19‑1 (MQ=255)
                  tgccggatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattcaatatattgcagagttcacgtaggcctgatGCGCTACGCTTATCAGGcc                                                                                   <  1:10721‑M2/19‑1 (MQ=255)
                    cGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACGGCCTGATGCGCTACGCTTATCAGGCCt                                                                                  <  2:353326/99‑1 (MQ=255)
                       gatgcggcgtaaacgccttatccggcctacaaaagcatgcaaattcaatatattgcagagttcacgtaggcctgatGCGCTACGCTTATCAGGCCTACGt                                                                              <  1:2155023‑M2/24‑1 (MQ=255)
                       aaaCGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGt                                                                              <  1:1619297/100‑1 (MQ=255)
                          cGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGc                                                                           <  1:1158117/100‑1 (MQ=255)
                            aCAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTc                                                                         <  1:1355116/100‑1 (MQ=255)
                            aCAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTc                                                                         >  1:1875128/1‑100 (MQ=255)
                             cAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCa                                                                        <  1:730068/100‑1 (MQ=255)
                                aagaGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGc                                                                     <  2:831719/100‑1 (MQ=255)
                                aagaGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGc                                                                     <  2:1286876/100‑1 (MQ=255)
                                 agagTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCa                                                                    <  1:1724868/100‑1 (MQ=255)
                                  gagTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCaa                                                                   <  1:1777225/100‑1 (MQ=255)
                                     tAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAatat                                                                <  1:601300/100‑1 (MQ=255)
                                     tAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAatat                                                                <  2:1559974/100‑1 (MQ=255)
                                      aaTCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAatata                                                               >  1:1867185/1‑100 (MQ=255)
                                      aaTCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAatata                                                               >  2:1430812/1‑100 (MQ=255)
                                        tctcAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATAtt                                                             <  2:503828/100‑1 (MQ=255)
                                         ctcAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTg                                                            >  1:2028977/1‑100 (MQ=255)
                                         ctcAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTg                                                            >  2:43028/1‑100 (MQ=255)
                                          tcAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGa                                                           >  2:537310/1‑100 (MQ=255)
                                          tcAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGa                                                           <  1:1190522/100‑1 (MQ=255)
                                           cAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGaa                                                          >  2:2171500/1‑100 (MQ=255)
                                           cAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGaa                                                          >  2:2087668/1‑100 (MQ=255)
                                            aaTGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAAt                                                         <  1:2154572/100‑1 (MQ=255)
                                              tGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAAttt                                                       <  1:484422/100‑1 (MQ=255)
                                              tGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCACGCAATATATTGAAttt                                                       >  2:1376124/1‑100 (MQ=255)
                                               gCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTg                                                      >  1:259740/1‑100 (MQ=255)
                                                ccAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTg                                                      <  1:900971/99‑1 (MQ=255)
                                                ccAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGc                                                     >  2:1357963/1‑100 (MQ=255)
                                                ccAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGc                                                     >  1:1111028/1‑100 (MQ=255)
                                                 cAGGTTTAAGCCTGGTATTAAAAGTGCTGGAAAGCGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATACTGAATTTGCa                                                    >  2:1547371/1‑100 (MQ=255)
                                                  aGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCAc                                                   <  1:1555668/100‑1 (MQ=255)
                                                  aGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCAc                                                   >  1:122685/1‑100 (MQ=255)
                                                  aGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCAc                                                   <  1:13923/100‑1 (MQ=255)
                                                   ggTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACg                                                  <  2:411162/100‑1 (MQ=255)
                                                   ggTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACg                                                  <  2:410310/100‑1 (MQ=255)
                                                       tAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCt                                              <  1:2282769/100‑1 (MQ=255)
                                                           ccTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTa                                          <  1:75421/100‑1 (MQ=255)
                                                            cTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAg                                         <  1:542171/100‑1 (MQ=255)
                                                                tATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCg                                     >  1:1325013/1‑100 (MQ=255)
                                                                 aTTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCgg                                    >  1:1399744/1‑100 (MQ=255)
                                                                   tAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGAt                                  >  2:595134/1‑100 (MQ=255)
                                                                   tAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGAt                                  >  1:2250567/1‑100 (MQ=255)
                                                                   tAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGAt                                  >  1:161521/1‑100 (MQ=255)
                                                                    aaaaGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATa                                 >  2:1420950/1‑100 (MQ=255)
                                                                     aaaGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATaa                                <  1:2190183/100‑1 (MQ=255)
                                                                      aaGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAg                               <  2:1915530/100‑1 (MQ=255)
                                                                      aaGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAg                               <  1:1761248/100‑1 (MQ=255)
                                                                        gTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGc                             <  2:1813983/100‑1 (MQ=255)
                                                                          gCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGTAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCg                            <  2:1281478/99‑1 (MQ=255)
                                                                            tGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTc                         >  2:1698171/1‑100 (MQ=255)
                                                                             ggCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCa                        >  1:2206614/1‑100 (MQ=255)
                                                                             ggCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCa                        >  2:922264/1‑100 (MQ=255)
                                                                              gCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCAc                       >  2:1350709/1‑100 (MQ=255)
                                                                                       aaacgaccTGTTGCGCTACGGTTATCAGGCCTACGTGGCTCATGCAATAGATTGAATTTGCACGATCTTGTAGGCCGGATGCGGCGTGAACGCCTTATcc              <  2:1918312/94‑1 (MQ=17)
                                                                                           tGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc           <  1:574453/99‑1 (MQ=255)
                                                                                           tGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa          <  2:979016/100‑1 (MQ=255)
                                                                                            gcctgatGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt         >  1:31606‑M2/8‑100 (MQ=255)
                                                                                             cctgatGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg        <  1:1430820‑M2/94‑1 (MQ=255)
                                                                                              ctgatGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGa       <  2:629011‑M2/95‑1 (MQ=255)
                                                                                              ctgatGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGa       >  2:803145‑M2/6‑100 (MQ=255)
                                                                                               tgatGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGaa      >  1:575912‑M2/5‑100 (MQ=255)
                                                                                               tgatGAGCTACGCATAACAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg        <  1:43028‑M2/94‑1 (MQ=255)
                                                                                                gatGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAtgagt     <  1:1590508‑M2/97‑3 (MQ=255)
                                                                                                gatGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAAt     >  2:1508982‑M2/4‑100 (MQ=255)
                                                                                                   gcgcTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATaaa  <  1:2324387/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
AAGCGGAACGGGCGTGCCACCGCAAACGACAGAAGAGTAATCTCAATGCCAGGTTTAAGCCTGGTATTAAAAGTGCTGGCAAACGCAAAACTGCCTGATGCGCTACGCTTATCAGGCCTACGTGGCTCATGCAATATATTGAATTTGCACGATCTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAATAAA  >  NC_000913/2714191‑2714389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.