New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2794135NA (NA)3 (0.040) 3/168 NT NA noncoding (108/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 = 2794163 NA (NA)noncoding (136/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

CGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACAC  >  NC_000913/2794036‑2794233
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cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                                                                                                    >  1:970598/1‑100 (MQ=255)
   cGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgc                                                                                                  <  2:2283029‑M1/99‑3 (MQ=255)
    gCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccg                                                                                                <  1:375305‑M1/100‑5 (MQ=255)
     cgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCAgg                                                                                               >  1:1637896‑M2/19‑100 (MQ=255)
      tGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                              <  1:197805/100‑1 (MQ=255)
       gcgcGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGt                                                                                             >  2:1598/1‑100 (MQ=255)
           gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg                                                                                         <  1:1238927/100‑1 (MQ=255)
             cTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTCCGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCg                                                                                       >  2:706193/1‑100 (MQ=255)
              ttGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCgg                                                                                      <  2:400379/100‑1 (MQ=255)
               tGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGa                                                                                     <  2:42958/100‑1 (MQ=255)
               tGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGa                                                                                     <  2:330645/100‑1 (MQ=255)
                gTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAg                                                                                    >  1:66601/1‑100 (MQ=255)
                  ccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc                                                                                  >  1:1528274‑M2/6‑100 (MQ=255)
                    ggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc                                                                                <  1:1573459‑M2/97‑1 (MQ=255)
                      cCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctc                                                                              >  1:2250123‑M2/2‑100 (MQ=255)
                       cTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct                                                                             >  1:923662/1‑100 (MQ=255)
                       cTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctct                                                                             <  1:941137/100‑1 (MQ=255)
                          cGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAGATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCG                                                                          >  1:2043760‑M2/1‑100 (MQ=255)
                          cGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGCAAGGCGGAGCCGCTCTCCG                                                                          <  2:2265344‑M2/100‑1 (MQ=255)
                           ggggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGG                                                                         >  1:1797214‑M2/1‑100 (MQ=255)
                           ggggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGG                                                                         >  1:449507‑M2/1‑100 (MQ=255)
                           ggggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGG                                                                         >  2:1826834‑M2/1‑100 (MQ=255)
                             ggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCa                                                                       >  1:736469/1‑100 (MQ=255)
                              gATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggcca                                                                      <  2:1731016‑M1/100‑31 (MQ=255)
                              gATCCAGGTCGGATAAGGCGTTTACCCCGCATCCGCCAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCa                                                                       <  2:1021014/99‑1 (MQ=255)
                                nccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaa                                                                    >  1:1725238/2‑100 (MQ=255)
                                 ccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaaa                                                                   <  2:1763402/100‑1 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacat                                                                  <  1:426695‑M1/100‑35 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                  <  1:942169/100‑1 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                  >  1:122340/1‑100 (MQ=255)
                                    ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                <  1:2161726/100‑1 (MQ=255)
                                    ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                >  2:1817265/1‑100 (MQ=255)
                                    ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                >  1:1393060/1‑100 (MQ=255)
                                     gTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAAt                                                               <  1:752820/100‑1 (MQ=255)
                                      tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                              <  1:1598/100‑1 (MQ=255)
                                      tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                              <  1:1564438/100‑1 (MQ=255)
                                       cGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                              <  1:513914/99‑1 (MQ=255)
                                        ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCaa                                                            >  1:344186/1‑100 (MQ=255)
                                        ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCaa                                                            >  1:344177/1‑100 (MQ=255)
                                           tAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATaa                                                         >  1:1559102/1‑100 (MQ=255)
                                            aaGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAGGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAAc                                                        <  2:512337/100‑1 (MQ=255)
                                            aaGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGCAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAAc                                                        >  1:2201743/1‑100 (MQ=255)
                                            aaGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAAc                                                        >  1:227860/1‑100 (MQ=255)
                                             aGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACa                                                       >  1:321558/1‑100 (MQ=255)
                                              ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                      >  2:2278186/1‑100 (MQ=255)
                                               gCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAt                                                     >  1:592994/1‑100 (MQ=255)
                                               gCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAt                                                     <  2:1295893/100‑1 (MQ=255)
                                                cGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAtt                                                    <  2:1147894/100‑1 (MQ=255)
                                                cGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAtt                                                    <  2:981680/100‑1 (MQ=255)
                                                    tACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacatagatttcttcctgttcac                                                <  1:832789‑M1/100‑53 (MQ=255)
                                                    tACACCGCATCCGACAATCTGTACTGGAACAGGAAGAAATCTATGTTAGCCGGGTAAAGCGGATCCGCTCTCCGGCAAAAAGAATCAATAACAATtata                                                 <  2:2121634/99‑1 (MQ=255)
                                                     aCGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcg                                               >  1:1847040/1‑100 (MQ=255)
                                                      cgccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgc                                              >  2:648513/1‑100 (MQ=255)
                                                       gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAACGAATCAATAACAATTATAcgcg                                             <  1:920357/100‑1 (MQ=255)
                                                       gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                             <  2:122339/100‑1 (MQ=255)
                                                       gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                             <  1:552504/100‑1 (MQ=255)
                                                         cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                           <  2:2191940/100‑1 (MQ=255)
                                                         cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                           <  1:594580/100‑1 (MQ=255)
                                                         cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGACAGGTAAGGCGGAGCCGCTCTCCGGCAAAAAAAATCAATAACAATTATACGCGTg                                           <  2:2215015/100‑1 (MQ=255)
                                                           cATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAc                                         >  1:1094996/1‑100 (MQ=255)
                                                              ccGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCg                                      >  1:1432594/1‑100 (MQ=255)
                                                              cagaaaaTCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCTTGACCCg                                      >  2:2200954/6‑100 (MQ=255)
                                                               cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                     >  2:45150/1‑100 (MQ=255)
                                                               cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                     >  2:1491020/1‑100 (MQ=255)
                                                                  cAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGgcgc                                  <  1:1089543/100‑1 (MQ=255)
                                                                   aaTCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGcgcg                                 <  2:2306530/100‑1 (MQ=255)
                                                                     tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                               <  2:1059769/100‑1 (MQ=255)
                                                                       tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                             >  2:1837954/1‑100 (MQ=255)
                                                                       tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                             >  2:1914210/1‑100 (MQ=255)
                                                                          aCGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATg                          >  1:572397/1‑100 (MQ=255)
                                                                          aCGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATg                          <  1:728724/100‑1 (MQ=255)
                                                                           cGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGt                         >  2:8035/1‑100 (MQ=255)
                                                                            gTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgta                        <  1:832789‑M2/100‑49 (MQ=255)
                                                                             tGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCg                       >  2:1206493/1‑100 (MQ=255)
                                                                              gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                      <  2:867509/100‑1 (MQ=255)
                                                                              gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                      <  2:1591689/100‑1 (MQ=255)
                                                                                aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                    <  1:1873153/100‑1 (MQ=255)
                                                                                aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                    <  1:1837967/100‑1 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                   <  2:1974949/100‑1 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                   <  2:494739/100‑1 (MQ=255)
                                                                                  aGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                    >  2:2183551/1‑98 (MQ=255)
                                                                                   ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                 >  1:125276/1‑100 (MQ=255)
                                                                                   ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                 >  1:1028841/1‑100 (MQ=255)
                                                                                   ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                 >  1:1133575/1‑100 (MQ=255)
                                                                                      agaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGctct              >  1:1883496/1‑100 (MQ=255)
                                                                                        aaaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTcc            <  1:1375520/100‑1 (MQ=255)
                                                                                        aaaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTcc            <  2:877845/100‑1 (MQ=255)
                                                                                          aTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCa          <  2:82015/100‑1 (MQ=255)
                                                                                           tCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTGTGCCa          >  2:123933/1‑99 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctg      <  1:426695‑M2/100‑67 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg      <  1:1202556/100‑1 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg      >  1:2192146/1‑100 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg      <  2:791250/100‑1 (MQ=255)
                                                                                               tGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGa     >  2:1999348/1‑100 (MQ=255)
                                                                                                gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac    <  1:305523/100‑1 (MQ=255)
                                                                                                 ttGGCCGGGTAAGGCGGAGCAGAACAAAAAAAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac    <  2:1271788/99‑1 (MQ=255)
                                                                                                  tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatc  <  2:1731016‑M2/100‑71 (MQ=255)
                                                                                                  tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac  >  2:1270708/1‑100 (MQ=255)
                                                                                                  tGGCCGGGTAAGGCGGAGCCACTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac  <  2:970593/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
CGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACAC  >  NC_000913/2794036‑2794233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.