BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2794135	NA (NA)	3 (0.040)	3/168	NT	NA	noncoding (108/136 nt)	REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
*	?	NC_000913	= 2794163	NA (NA)	3 (0.040)	3/168	NT	NA	noncoding (136/136 nt)	REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 112 total aligned reads displayed.

GGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAAT  >  NC_000913/2794065‑2794262

ggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCa                                                                                                    >  1:736469/1‑100 (MQ=255)

 gATCCAGGTCGGATAAGGCGTTTACCCCGCATCCGCCAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCa                                                                                                    <  2:1021014/99‑1 (MQ=255)

     cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                                               <  1:942169/100‑1 (MQ=255)

     cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                                               >  1:122340/1‑100 (MQ=255)

       ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                                             >  2:1817265/1‑100 (MQ=255)

       ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                                             <  1:2161726/100‑1 (MQ=255)

       ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                                             >  1:1393060/1‑100 (MQ=255)

        gTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAAt                                                                                            <  1:752820/100‑1 (MQ=255)

         tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                                                           <  1:1564438/100‑1 (MQ=255)

         tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                                                           <  1:1598/100‑1 (MQ=255)

          cGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                                                           <  1:513914/99‑1 (MQ=255)

           ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCaa                                                                                         >  1:344177/1‑100 (MQ=255)

           ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCaa                                                                                         >  1:344186/1‑100 (MQ=255)

              tAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATaa                                                                                      >  1:1559102/1‑100 (MQ=255)

               aaGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAGGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAAc                                                                                     <  2:512337/100‑1 (MQ=255)

               aaGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAAc                                                                                     >  1:227860/1‑100 (MQ=255)

                aGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACa                                                                                    >  1:321558/1‑100 (MQ=255)

                 ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                                                   >  2:2278186/1‑100 (MQ=255)

                  gCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAt                                                                                  <  2:1295893/100‑1 (MQ=255)

                  gCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAt                                                                                  >  1:592994/1‑100 (MQ=255)

                   cGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAtt                                                                                 <  2:1147894/100‑1 (MQ=255)

                        aCGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcg                                                                            >  1:1847040/1‑100 (MQ=255)

                         cgccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgc                                                                           >  2:648513/1‑100 (MQ=255)

                          gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAACGAATCAATAACAATTATAcgcg                                                                          <  1:920357/100‑1 (MQ=255)

                          gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                                                          <  2:122339/100‑1 (MQ=255)

                          gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                                                          <  1:552504/100‑1 (MQ=255)

                            cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                                                        <  2:2191940/100‑1 (MQ=255)

                            cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTg                                                                        <  1:594580/100‑1 (MQ=255)

                            cgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGACAGGTAAGGCGGAGCCGCTCTCCGGCAAAAAAAATCAATAACAATTATACGCGTg                                                                        <  2:2215015/100‑1 (MQ=255)

                              cATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAc                                                                      >  1:1094996/1‑100 (MQ=255)

                                 ccGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCg                                                                   >  1:1432594/1‑100 (MQ=255)

                                 cagaaaaTCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCTTGACCCg                                                                   >  2:2200954/6‑100 (MQ=255)

                                  cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                                                  >  2:1491020/1‑100 (MQ=255)

                                  cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                                                  >  2:45150/1‑100 (MQ=255)

                                     cAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGgcgc                                                               <  1:1089543/100‑1 (MQ=255)

                                        tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                                            <  2:1059769/100‑1 (MQ=255)

                                          tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                                                          >  2:1837954/1‑100 (MQ=255)

                                          tGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaa                                                          >  2:1914210/1‑100 (MQ=255)

                                             aCGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATg                                                       >  1:572397/1‑100 (MQ=255)

                                             aCGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATg                                                       <  1:728724/100‑1 (MQ=255)

                                              cGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGt                                                      >  2:8035/1‑100 (MQ=255)

                                               gTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgta                                                     <  1:832789‑M2/100‑49 (MQ=255)

                                                tGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCg                                                    >  2:1206493/1‑100 (MQ=255)

                                                 gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                                                   <  2:1591689/100‑1 (MQ=255)

                                                 gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                                                   <  2:867509/100‑1 (MQ=255)

                                                   aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                                                 <  1:1837967/100‑1 (MQ=255)

                                                   aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                                                 <  1:1873153/100‑1 (MQ=255)

                                                    cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                                                <  2:494739/100‑1 (MQ=255)

                                                    cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                                                <  2:1974949/100‑1 (MQ=255)

                                                     aGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                                                 >  2:2183551/1‑98 (MQ=255)

                                                      ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                              >  1:1028841/1‑100 (MQ=255)

                                                      ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                              >  1:1133575/1‑100 (MQ=255)

                                                         agaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGctct                                           >  1:1883496/1‑100 (MQ=255)

                                                           aaaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTcc                                         <  1:1375520/100‑1 (MQ=255)

                                                           aaaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTcc                                         <  2:877845/100‑1 (MQ=255)

                                                             aTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCa                                       <  2:82015/100‑1 (MQ=255)

                                                              tCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTGTGCCa                                       >  2:123933/1‑99 (MQ=255)

                                                                 aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg                                   >  1:2192146/1‑100 (MQ=255)

                                                                 aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg                                   <  1:1202556/100‑1 (MQ=255)

                                                                 aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg                                   <  2:791250/100‑1 (MQ=255)

                                                                  tGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGa                                  >  2:1999348/1‑100 (MQ=255)

                                                                   gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac                                 <  1:305523/100‑1 (MQ=255)

                                                                     tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatc                               <  2:1731016‑M2/100‑71 (MQ=255)

                                                                     tGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac                               >  2:1270708/1‑100 (MQ=255)

                                                                     tGGCCGGGTAAGGCGGAGCCACTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacac                               <  2:970593/100‑1 (MQ=255)

                                                                       gCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacacac                             >  1:917825/1‑100 (MQ=255)

                                                                       gCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacacac                             >  1:767565/1‑100 (MQ=255)

                                                                       gCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacacac                             >  2:1311008/1‑100 (MQ=255)

                                                                            gTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCg                        <  1:1491029/100‑1 (MQ=255)

                                                                            gTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCg                        >  1:779586/1‑100 (MQ=255)

                                                                             tAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCga                       <  1:8035/100‑1 (MQ=255)

                                                                             tAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCga                       <  1:1283122/100‑1 (MQ=255)

                                                                             tAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCga                       >  1:123604/1‑100 (MQ=255)

                                                                              aaGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATCACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                      <  1:1844755/100‑1 (MQ=255)

                                                                              aaGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                      <  2:890721/100‑1 (MQ=255)

                                                                              aaGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                      <  2:714227/100‑1 (MQ=255)

                                                                               aGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgaga                     >  2:1325603/1‑100 (MQ=255)

                                                                                ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    <  2:1684809/100‑1 (MQ=255)

                                                                                ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    <  2:2250104/100‑1 (MQ=255)

                                                                                ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    <  1:1769235/100‑1 (MQ=255)

                                                                                ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACCCGTGACGCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                      <  2:2015804/98‑1 (MQ=255)

                                                                                ggCGGAGCCGATCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCAGGGCGCTCTCCCAAGTGACACACTTTCgaga                     >  2:917205/1‑99 (MQ=255)

                                                                                 gCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTCACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    <  2:419256/99‑1 (MQ=255)

                                                                                  cGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGa                  >  1:361404/1‑100 (MQ=255)

                                                                                     aGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTc               >  1:417776/1‑100 (MQ=255)

                                                                                        cGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAgg            <  2:1094991/100‑1 (MQ=255)

                                                                                         gCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGa           <  2:2245551/100‑1 (MQ=255)

                                                                                          ctctCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGAt          >  2:2298186/1‑100 (MQ=255)

                                                                                          ctctCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGAt          <  2:1874105/100‑1 (MQ=255)

                                                                                            ctcCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATgg        <  2:352502/100‑1 (MQ=255)

                                                                                            ctcCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATgg        >  1:2281658/1‑100 (MQ=255)

                                                                                              ccGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATgggg      >  2:358547/1‑100 (MQ=255)

                                                                                              ccGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATgggg      >  2:119473/1‑100 (MQ=255)

                                                                                               cGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtaggccggacaagacgcgcagc     <  1:375305‑M2/100‑97 (MQ=255)

                                                                                               cGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGc     <  1:706196/100‑1 (MQ=255)

                                                                                               cGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGc     <  2:1815174/100‑1 (MQ=255)

                                                                                                 gCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtaggccggacaagacgcgcagcg    <  2:2283029‑M2/99‑98 (MQ=255)

                                                                                                  cAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAat  >  1:1116643/1‑100 (MQ=255)

                                                                                                  cAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAat  >  1:1239294/1‑100 (MQ=255)

                                                                                                  cAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAat  >  2:1580345/1‑100 (MQ=255)

GGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAAT  >  NC_000913/2794065‑2794262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.