New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4618165 =NA (NA)4 (0.050) 4/164 NT 5.7% noncoding (49/82 nt) REP353 (repetitive extragenic palindromic) element; contains 2 REP sequences REP353 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4618192 = 66 (0.820)noncoding (76/82 nt) REP353 (repetitive extragenic palindromic) element; contains 2 REP sequences REP353 (repetitive extragenic palindromic) element; contains 2 REP sequences
Rejected: Frequency below cutoff threshold.

Only 100 of 105 total aligned reads displayed.

CAGCTACTAAGTAAGATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATGAAGAA  >  NC_000913/4618093‑4618291
                                                                                                   |                                                                                                   
cgttttttacgaataatttcttgtgcgagaaacaaggtaacctcccgaggaaaagagtatgaggcggcttttGCCGGATAAGGCGTAGACGCATCCGGCa                                                                                                     >  1:1063183‑M1/73‑100 (MQ=255)
 agcTACTAAGTAAGATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCaa                                                                                                    >  2:1941871/1‑100 (MQ=255)
   tttttacgaataatttcttgtgcgagaaacaaggtaacctcccgaggaaaagagtatgaggcggcttttGCCGGATAAGGCGTAGACGCATCCGGCaaaa                                                                                                  >  2:489835‑M1/70‑100 (MQ=255)
   ctactaAGTAAGATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCaaaa                                                                                                  <  2:1835216/100‑1 (MQ=255)
    ttttacgaataatttcttgtgcgagaaacaaggtaacctcccgaggaaaagagtatgaggcggcttttGCCGGATAAGGCGTAGACGCATCCGGCAAAAg                                                                                                 >  2:1137045‑M1/69‑100 (MQ=255)
    tactaAGTAAGATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAg                                                                                                 >  1:430296/1‑100 (MQ=255)
    tactaAGTAAGATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAg                                                                                                 <  1:718317/100‑1 (MQ=255)
     actaAGTAAGATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAgc                                                                                                >  1:702334/1‑100 (MQ=255)
     actaAGTAAGATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGAAAAAgc                                                                                                >  1:1829406/1‑100 (MQ=255)
        aagtaagATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAgccgc                                                                                             >  1:205712/1‑100 (MQ=255)
          gtaagATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAgcatctt                                                                                           >  2:480141/1‑95 (MQ=255)
          gtaagATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAgcatctt                                                                                           >  2:1124485/1‑95 (MQ=255)
          gtaagATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAgcatctt                                                                                           >  2:479733/1‑95 (MQ=255)
          gtaagATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCt                                                                                           >  2:2296510/1‑100 (MQ=255)
           taagATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGCAGACGCATCCGGCAAAAGCCGCCTc                                                                                          <  2:622842/100‑1 (MQ=255)
            aagATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCa                                                                                         >  1:553160/1‑100 (MQ=255)
            aagATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCa                                                                                         <  2:741049/100‑1 (MQ=255)
             agATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCAt                                                                                        >  1:1151550/1‑100 (MQ=255)
             agATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCAt                                                                                        <  1:884771/100‑1 (MQ=255)
               aTGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCAttc                                                                                      <  1:2176971/100‑3 (MQ=255)
                tGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATAct                                                                                     >  1:1183338/1‑100 (MQ=255)
                      gtgcgagaagcaaggtaacctcacgaggaaaagagtatgaggcggcttttGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCtttt                                                                                >  2:915050‑M1/51‑99 (MQ=255)
                      aCGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTc                                                                               <  2:1137947/100‑1 (MQ=255)
                        gCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCt                                                                             >  2:1695280/1‑100 (MQ=255)
                        gCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCt                                                                             >  2:854539/1‑100 (MQ=255)
                         ccTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTc                                                                            <  1:227781/100‑1 (MQ=255)
                          cTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCg                                                                           >  1:220739/1‑100 (MQ=255)
                           tGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCgg                                                                          <  2:460543/100‑1 (MQ=255)
                            gATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCg                                                                           <  1:1492863/98‑1 (MQ=255)
                              tgcgctgcgcTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCggg                                                                         <  2:151714/98‑1 (MQ=255)
                              tgcgctgcgcTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAg                                                                       >  1:1749142/1‑100 (MQ=255)
                               gcgctgcgctTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAgg                                                                      <  1:102169/100‑1 (MQ=255)
                               gcgctgcgctTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAgg                                                                      <  2:1344322/100‑1 (MQ=255)
                               gcgctgcgctGATCAGGCCAACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATACGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAg                                                                       <  2:794032/99‑1 (MQ=255)
                                 gctgcgctTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGtt                                                                    <  1:540003/100‑1 (MQ=255)
                                       ctTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTg                                                              >  2:2015878/1‑100 (MQ=255)
                                       ctTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTg                                                              <  2:352252/100‑1 (MQ=255)
                                       cctATCGGGCCCAGGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTa                                                                   <  2:1918623/93‑1 (MQ=255)
                                         tATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGtt                                                            >  2:1734291/1‑100 (MQ=255)
                                          aTCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGttt                                                           <  2:1245053/100‑1 (MQ=255)
                                             aGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTtctc                                                        <  1:1448968/100‑1 (MQ=255)
                                              ggCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTtctc                                                        <  1:772666/99‑1 (MQ=255)
                                              ggCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCg                                                       >  2:2349606/1‑100 (MQ=255)
                                              ggCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCg                                                       <  2:1106091/100‑1 (MQ=255)
                                                ccTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGcn                                                     <  2:2156106/100‑2 (MQ=255)
                                                ccTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGca                                                     <  2:1358969/100‑1 (MQ=255)
                                                ccTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGca                                                     >  2:385703/1‑100 (MQ=255)
                                                  tACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGcaca                                                   >  1:935275/1‑100 (MQ=255)
                                                  aaaagagtatgaggcggcttttgccggatgcgtctacgccttatccggcAAAAGCCGCCTCATACTCTTTTCCTCGTGAGGTTACCTTGCTTCTCGcac                                                    >  2:915050‑M2/50‑99 (MQ=255)
                                                      agaCGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGaa                                               >  1:163381/1‑100 (MQ=255)
                                                        ttccgatctcccGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAat                                             <  2:56648/91‑1 (MQ=255)
                                                            ttCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAattatt                                         <  1:1924845/99‑1 (MQ=255)
                                                            aTCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAattatt                                         >  1:1113835/1‑100 (MQ=255)
                                                             tCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAattatta                                        >  2:1924831/1‑99 (MQ=255)
                                                             tCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTc                                        <  1:565411/100‑1 (MQ=255)
                                                              cTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCg                                       >  1:1891369/1‑100 (MQ=255)
                                                               tACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGt                                      >  1:2265896/1‑100 (MQ=255)
                                                                aCCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTa                                     >  2:552233/1‑100 (MQ=255)
                                                                 cccGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAatagatcggaa                                    >  1:56648/1‑91 (MQ=255)
                                                                 cccGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTaa                                    >  2:765108/1‑100 (MQ=255)
                                                                 cccGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTaa                                    >  2:1817616/1‑100 (MQ=255)
                                                                   cttttgccggatgcgtctacgccttatccggcAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTaaaa                                  >  2:1137045‑M2/33‑100 (MQ=255)
                                                                    ttttgccggatgcgtctacgccttatccggcAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTaaaaa                                 >  2:489835‑M2/32‑100 (MQ=255)
                                                                       tgccggatgcgtctacgccttatccggcAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACg                              >  1:1063183‑M2/29‑100 (MQ=255)
                                                                       ggCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACg                              >  1:2053072/1‑100 (MQ=255)
                                                                       ggCCGGATAAGGCGTAGACGCAGCCGGCAAAAGCCGCCGCATACTCTGTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACg                              <  1:1825499/100‑1 (MQ=255)
                                                                        GCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGt                             >  2:76283‑M1/1‑100 (MQ=255)
                                                                         CCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTg                            <  1:1172748‑M1/100‑1 (MQ=255)
                                                                         CCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTg                            >  2:2276089‑M1/1‑100 (MQ=255)
                                                                         CCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTg                            >  2:724811‑M1/1‑100 (MQ=255)
                                                                         CCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTg                            <  1:1646619‑M1/100‑1 (MQ=255)
                                                                          CGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTg                            >  2:640986‑M1/1‑99 (MQ=255)
                                                                           GGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAt                          <  1:2176370‑M1/100‑1 (MQ=255)
                                                                              TAAGGCGTAGACGCATCCGGCAAAAGCCGCCTGATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAAAAAAACGTAAAAAACGTGATGGt                       >  2:1856641‑M1/1‑100 (MQ=255)
                                                                              TAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGt                       >  2:1573026‑M1/1‑100 (MQ=255)
                                                                                aGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCa                     >  1:1793390/1‑100 (MQ=255)
                                                                                 ggCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGCTGGTc                      >  1:474366/1‑98 (MQ=255)
                                                                                 ggCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCAt                    >  2:1780432/1‑100 (MQ=255)
                                                                                 ggCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCAt                    >  1:1930649/1‑100 (MQ=255)
                                                                                 ggCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCAt                    >  1:353789/1‑100 (MQ=255)
                                                                                  gCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATg                   >  1:1752905/1‑100 (MQ=255)
                                                                                    gTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATgcg                 >  2:52774/1‑100 (MQ=255)
                                                                                     tAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATgcgc                <  2:1890206/100‑1 (MQ=255)
                                                                                       gACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGCAATTATTCGTAAAAAACGTGATGGTCATGCGCTg              >  2:1422896/1‑100 (MQ=255)
                                                                                       gACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTg              >  2:1327880/1‑100 (MQ=255)
                                                                                       gACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTg              >  1:554416/1‑100 (MQ=255)
                                                                                          ttatccggcAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGc           <  1:489838‑M2/91‑1 (MQ=255)
                                                                                          gCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGc           >  2:257874/1‑100 (MQ=255)
                                                                                           cATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCg          >  1:1515556/1‑100 (MQ=255)
                                                                                           cATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCg          >  2:1600124/1‑100 (MQ=255)
                                                                                           cATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCg          <  2:1557359/100‑1 (MQ=255)
                                                                                              ccggcAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATg       <  1:313481‑M2/95‑1 (MQ=255)
                                                                                               cggcAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATga      >  2:191274‑M2/5‑100 (MQ=255)
                                                                                               cggcAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATga      >  1:2127146‑M2/5‑100 (MQ=255)
                                                                                                 gcAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATgaag    >  2:2101380‑M2/3‑100 (MQ=255)
                                                                                                 gcAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATgaag    <  2:2066949‑M2/98‑1 (MQ=255)
                                                                                                  cAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATgaaga   <  2:205711‑M2/99‑1 (MQ=255)
                                                                                                  cAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATgaaga   >  2:1452360‑M2/2‑100 (MQ=255)
                                                                                                   aaaaGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATgaagaa  >  2:614313/1‑100 (MQ=255)
                                                                                                   aaaaGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATga      <  2:1829393/96‑1 (MQ=255)
                                                                                                   |                                                                                                   
CAGCTACTAAGTAAGATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTGAGCGATGAAGAA  >  NC_000913/4618093‑4618291

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.